Ws 4, vraag 2
| Summary of compuational transaction | |
| Raw Input | view raw input (R code) |
| Raw Output | view raw output of R engine |
| Computing time | 2 seconds |
| R Server | 'Gwilym Jenkins' @ 72.249.127.135 |
| Summary of Dendrogram | |
| Label | Height |
| 1 | 0 |
| 2 | 0 |
| 3 | 0 |
| 4 | 0 |
| 5 | 0 |
| 6 | 0 |
| 7 | 0 |
| 8 | 0 |
| 9 | 0 |
| 10 | 0 |
| 11 | 0 |
| 12 | 0 |
| 13 | 0 |
| 14 | 0 |
| 15 | 0 |
| 16 | 0 |
| 17 | 0 |
| 18 | 0 |
| 19 | 0 |
| 20 | 0.0999999999999996 |
| 21 | 0.0999999999999996 |
| 22 | 0.0999999999999996 |
| 23 | 0.0999999999999996 |
| 24 | 0.0999999999999996 |
| 25 | 0.100000000000001 |
| 26 | 0.100000000000001 |
| 27 | 0.127614237491539 |
| 28 | 0.127614237491540 |
| 29 | 0.133333333333333 |
| 30 | 0.133333333333333 |
| 31 | 0.133333333333333 |
| 32 | 0.133333333333333 |
| 33 | 0.133333333333333 |
| 34 | 0.133333333333334 |
| 35 | 0.133333333333334 |
| 36 | 0.141421356237310 |
| 37 | 0.166666666666668 |
| 38 | 0.188561808316413 |
| 39 | 0.188561808316414 |
| 40 | 0.210018769324859 |
| 41 | 0.21001876932486 |
| 42 | 0.298142396999972 |
| 43 | 0.298142396999974 |
| 44 | 0.326556375844544 |
| 45 | 0.342300831451816 |
| 46 | 0.395598560014011 |
| 47 | 0.4 |
| 48 | 0.480740170061865 |
| 49 | 1.88788513590543 |
| 50 | 2.55361781079684 |
| 51 | 2.59339620797042 |
| 52 | 3.01931552046 |
| 53 | 3.23863409960806 |
| 54 | 3.46806877705480 |
| 55 | 4.06191428087813 |
| 56 | 4.68057842157158 |
| 57 | 5.21984726285288 |
| 58 | 5.69364869718968 |
| 59 | 5.89299657635046 |
| 60 | 6.29309710145194 |
| 61 | 6.5192298529511 |
| 62 | 7.6915442057264 |
| 63 | 8.92932504251512 |
| 64 | 9.89797332104063 |
| 65 | 11.5877753131761 |
| 66 | 15.2666418852441 |
| 67 | 20.0593422662097 |
| 68 | 21.2595685937569 |
| 69 | 21.271669453678 |
| 70 | 31.297962417147 |
| 71 | 54.1415316678088 |
| 72 | 100.735928817179 |
 |
| http://127.0.0.1/wessadotnet/public_html/freestatisticsdotorg/blog/date/2007/Nov/01/wavk9we08vc3eet1193926592/17nzp1193926250.png (open in new window) |
| http://127.0.0.1/wessadotnet/public_html/freestatisticsdotorg/blog/date/2007/Nov/01/wavk9we08vc3eet1193926592/17nzp1193926250.ps (open in new window) |
par4 <- as.logical(par4)
if (par3 == 'TRUE'){
dum = xlab
xlab = ylab
ylab = dum
}
x <- t(y)
hc <- hclust(dist(x),method=par1)
d <- as.dendrogram(hc)
str(d)
mysub <- paste('Method: ',par1)
bitmap(file='test1.png')
if (par4 == 'TRUE'){
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
if (par2 != 'ALL'){
if (par3 == 'TRUE'){
ylab = 'cluster'
} else {
xlab = 'cluster'
}
par2 <- as.numeric(par2)
memb <- cutree(hc, k = par2)
cent <- NULL
for(k in 1:par2){
cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
}
hc1 <- hclust(dist(cent),method=par1, members = table(memb))
de <- as.dendrogram(hc1)
bitmap(file='test2.png')
if (par4 == 'TRUE'){
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
str(de)
}
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- length(x[,1])-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,hc$labels[i])
a<-table.element(a,hc$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
if (par2 != 'ALL'){
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- par2-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,i)
a<-table.element(a,hc1$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
}
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