R version 2.8.0 (2008-10-20)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> x <- array(list(2120.88
+ ,9682.35
+ ,29.08
+ ,2174.56
+ ,9762.12
+ ,28.76
+ ,2196.72
+ ,10124.63
+ ,29.59
+ ,2350.44
+ ,10540.05
+ ,30.70
+ ,2440.25
+ ,10601.61
+ ,30.52
+ ,2408.64
+ ,10323.73
+ ,32.67
+ ,2472.81
+ ,10418.40
+ ,33.19
+ ,2407.60
+ ,10092.96
+ ,37.13
+ ,2454.62
+ ,10364.91
+ ,35.54
+ ,2448.05
+ ,10152.09
+ ,37.75
+ ,2497.84
+ ,10032.80
+ ,41.84
+ ,2645.64
+ ,10204.59
+ ,42.94
+ ,2756.76
+ ,10001.60
+ ,49.14
+ ,2849.27
+ ,10411.75
+ ,44.61
+ ,2921.44
+ ,10673.38
+ ,40.22
+ ,2981.85
+ ,10539.51
+ ,44.23
+ ,3080.58
+ ,10723.78
+ ,45.85
+ ,3106.22
+ ,10682.06
+ ,53.38
+ ,3119.31
+ ,10283.19
+ ,53.26
+ ,3061.26
+ ,10377.18
+ ,51.80
+ ,3097.31
+ ,10486.64
+ ,55.30
+ ,3161.69
+ ,10545.38
+ ,57.81
+ ,3257.16
+ ,10554.27
+ ,63.96
+ ,3277.01
+ ,10532.54
+ ,63.77
+ ,3295.32
+ ,10324.31
+ ,59.15
+ ,3363.99
+ ,10695.25
+ ,56.12
+ ,3494.17
+ ,10827.81
+ ,57.42
+ ,3667.03
+ ,10872.48
+ ,63.52
+ ,3813.06
+ ,10971.19
+ ,61.71
+ ,3917.96
+ ,11145.65
+ ,63.01
+ ,3895.51
+ ,11234.68
+ ,68.18
+ ,3801.06
+ ,11333.88
+ ,72.03
+ ,3570.12
+ ,10997.97
+ ,69.75
+ ,3701.61
+ ,11036.89
+ ,74.41
+ ,3862.27
+ ,11257.35
+ ,74.33
+ ,3970.10
+ ,11533.59
+ ,64.24
+ ,4138.52
+ ,11963.12
+ ,60.03
+ ,4199.75
+ ,12185.15
+ ,59.44
+ ,4290.89
+ ,12377.62
+ ,62.50
+ ,4443.91
+ ,12512.89
+ ,55.04
+ ,4502.64
+ ,12631.48
+ ,58.34
+ ,4356.98
+ ,12268.53
+ ,61.92
+ ,4591.27
+ ,12754.80
+ ,67.65
+ ,4696.96
+ ,13407.75
+ ,67.68
+ ,4621.40
+ ,13480.21
+ ,70.30
+ ,4562.84
+ ,13673.28
+ ,75.26
+ ,4202.52
+ ,13239.71
+ ,71.44
+ ,4296.49
+ ,13557.69
+ ,76.36
+ ,4435.23
+ ,13901.28
+ ,81.71
+ ,4105.18
+ ,13200.58
+ ,92.60
+ ,4116.68
+ ,13406.97
+ ,90.60
+ ,3844.49
+ ,12538.12
+ ,92.23
+ ,3720.98
+ ,12419.57
+ ,94.09
+ ,3674.40
+ ,12193.88
+ ,102.79
+ ,3857.62
+ ,12656.63
+ ,109.65
+ ,3801.06
+ ,12812.48
+ ,124.05
+ ,3504.37
+ ,12056.67
+ ,132.69
+ ,3032.60
+ ,11322.38
+ ,135.81
+ ,3047.03
+ ,11530.75
+ ,116.07
+ ,2962.34
+ ,11114.08
+ ,101.42)
+ ,dim=c(3
+ ,60)
+ ,dimnames=list(c('x1'
+ ,'x2'
+ ,'x3')
+ ,1:60))
>  y <- array(NA,dim=c(3,60),dimnames=list(c('x1','x2','x3'),1:60))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 60 members at h = 46096]
  |--[dendrogram w/ 2 branches and 21 members at h = 7230]
  |  |--[dendrogram w/ 2 branches and 8 members at h = 1317]
  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 228]
  |  |  |  |--leaf "51" 
  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 107]
  |  |  |     |--leaf "47" 
  |  |  |     `--leaf "50" 
  |  |  `--[dendrogram w/ 2 branches and 5 members at h = 603]
  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 105]
  |  |     |  |--leaf "44" 
  |  |     |  `--leaf "45" 
  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 354]
  |  |        |--leaf "48" 
  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 261]
  |  |           |--leaf "46" 
  |  |           `--leaf "49" 
  |  `--[dendrogram w/ 2 branches and 13 members at h = 2576]
  |     |--[dendrogram w/ 2 branches and 6 members at h = 1040]
  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 221]
  |     |  |  |--leaf "54" 
  |     |  |  `--leaf "57" 
  |     |  `--[dendrogram w/ 2 branches and 4 members at h = 330]
  |     |     |--leaf "56" 
  |     |     `--[dendrogram w/ 2 branches and 3 members at h = 257]
  |     |        |--leaf "53" 
  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 121]
  |     |           |--leaf "52" 
  |     |           `--leaf "55" 
  |     `--[dendrogram w/ 2 branches and 7 members at h = 1205]
  |        |--[dendrogram w/ 2 branches and 3 members at h = 246]
  |        |  |--leaf "43" 
  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 132]
  |        |     |--leaf "40" 
  |        |     `--leaf "41" 
  |        `--[dendrogram w/ 2 branches and 4 members at h = 437]
  |           |--leaf "37" 
  |           `--[dendrogram w/ 2 branches and 3 members at h = 218]
  |              |--leaf "38" 
  |              `--[dendrogram w/ 2 branches and 2 members at h = 128]
  |                 |--leaf "39" 
  |                 `--leaf "42" 
  `--[dendrogram w/ 2 branches and 39 members at h = 12362]
     |--[dendrogram w/ 2 branches and 14 members at h = 2620]
     |  |--[dendrogram w/ 2 branches and 3 members at h = 362]
     |  |  |--leaf "60" 
     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 210]
     |  |     |--leaf "58" 
     |  |     `--leaf "59" 
     |  `--[dendrogram w/ 2 branches and 11 members at h = 1740]
     |     |--[dendrogram w/ 2 branches and 5 members at h = 432]
     |     |  |--leaf "36" 
     |     |  `--[dendrogram w/ 2 branches and 4 members at h = 185]
     |     |     |--leaf "32" 
     |     |     `--[dendrogram w/ 2 branches and 3 members at h = 131]
     |     |        |--leaf "30" 
     |     |        `--[dendrogram w/ 2 branches and 2 members at h = 40.7]
     |     |           |--leaf "31" 
     |     |           `--leaf "35" 
     |     `--[dendrogram w/ 2 branches and 6 members at h = 619]
     |        |--[dendrogram w/ 2 branches and 2 members at h = 186]
     |        |  |--leaf "26" 
     |        |  `--leaf "27" 
     |        `--[dendrogram w/ 2 branches and 4 members at h = 219]
     |           |--[dendrogram w/ 2 branches and 2 members at h = 130]
     |           |  |--leaf "29" 
     |           |  `--leaf "34" 
     |           `--[dendrogram w/ 2 branches and 2 members at h = 159]
     |              |--leaf "28" 
     |              `--leaf "33" 
     `--[dendrogram w/ 2 branches and 25 members at h = 6292]
        |--[dendrogram w/ 2 branches and 12 members at h = 809]
        |  |--[dendrogram w/ 2 branches and 5 members at h = 415]
        |  |  |--[dendrogram w/ 2 branches and 2 members at h = 49.5]
        |  |  |  |--leaf "17" 
        |  |  |  `--leaf "18" 
        |  |  `--[dendrogram w/ 2 branches and 3 members at h = 255]
        |  |     |--leaf "14" 
        |  |     `--[dendrogram w/ 2 branches and 2 members at h = 147]
        |  |        |--leaf "15" 
        |  |        `--leaf "16" 
        |  `--[dendrogram w/ 2 branches and 7 members at h = 470]
        |     |--[dendrogram w/ 2 branches and 4 members at h = 228]
        |     |  |--[dendrogram w/ 2 branches and 2 members at h = 29.4]
        |     |  |  |--leaf "23" 
        |     |  |  `--leaf "24" 
        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 87.2]
        |     |     |--leaf "21" 
        |     |     `--leaf "22" 
        |     `--[dendrogram w/ 2 branches and 3 members at h = 244]
        |        |--leaf "25" 
        |        `--[dendrogram w/ 2 branches and 2 members at h = 110]
        |           |--leaf "19" 
        |           `--leaf "20" 
        `--[dendrogram w/ 2 branches and 13 members at h = 1621]
           |--[dendrogram w/ 2 branches and 5 members at h = 394]
           |  |--[dendrogram w/ 2 branches and 3 members at h = 98.6]
           |  |  |--leaf "6" 
           |  |  `--[dendrogram w/ 2 branches and 2 members at h = 56.5]
           |  |     |--leaf "7" 
           |  |     `--leaf "9" 
           |  `--[dendrogram w/ 2 branches and 2 members at h = 109]
           |     |--leaf "4" 
           |     `--leaf "5" 
           `--[dendrogram w/ 2 branches and 8 members at h = 1201]
              |--[dendrogram w/ 2 branches and 2 members at h = 96.2]
              |  |--leaf "1" 
              |  `--leaf "2" 
              `--[dendrogram w/ 2 branches and 6 members at h = 560]
                 |--[dendrogram w/ 2 branches and 2 members at h = 231]
                 |  |--leaf "12" 
                 |  `--leaf "13" 
                 `--[dendrogram w/ 2 branches and 4 members at h = 339]
                    |--leaf "3" 
                    `--[dendrogram w/ 2 branches and 3 members at h = 135]
                       |--leaf "11" 
                       `--[dendrogram w/ 2 branches and 2 members at h = 71.6]
                          |--leaf "8" 
                          `--leaf "10" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/1zosh1229340033.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/2wd7q1229340033.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/3rrbd1229340033.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/47u4q1229340033.tab") 
+ }
> 
> system("convert tmp/1zosh1229340033.ps tmp/1zosh1229340033.png")
> system("convert tmp/2wd7q1229340033.ps tmp/2wd7q1229340033.png")
convert: unable to open image `tmp/2wd7q1229340033.ps': No such file or directory.
convert: missing an image filename `tmp/2wd7q1229340033.png'.
> 
> 
> proc.time()
   user  system elapsed 
  0.593   0.189   1.733