R version 2.7.0 (2008-04-22)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> x <- array(list(2218
+ ,22780
+ ,517
+ ,1855
+ ,17351
+ ,525
+ ,2187
+ ,21382
+ ,523
+ ,1852
+ ,24561
+ ,519
+ ,1570
+ ,17409
+ ,509
+ ,1851
+ ,11514
+ ,512
+ ,1954
+ ,31514
+ ,519
+ ,1828
+ ,27071
+ ,517
+ ,2251
+ ,29462
+ ,510
+ ,2277
+ ,26105
+ ,509
+ ,2085
+ ,22397
+ ,501
+ ,2282
+ ,23843
+ ,507
+ ,2266
+ ,21705
+ ,569
+ ,1878
+ ,18089
+ ,580
+ ,2267
+ ,20764
+ ,578
+ ,2069
+ ,25316
+ ,565
+ ,1746
+ ,17704
+ ,547
+ ,2299
+ ,15548
+ ,555
+ ,2360
+ ,28029
+ ,562
+ ,2214
+ ,29383
+ ,561
+ ,2825
+ ,36438
+ ,555
+ ,2355
+ ,32034
+ ,544
+ ,2333
+ ,22679
+ ,537
+ ,3016
+ ,24319
+ ,543
+ ,2155
+ ,18004
+ ,594
+ ,2172
+ ,17537
+ ,611
+ ,2150
+ ,20366
+ ,613
+ ,2533
+ ,22782
+ ,611
+ ,2058
+ ,19169
+ ,594
+ ,2160
+ ,13807
+ ,595
+ ,2259
+ ,29743
+ ,591
+ ,2498
+ ,25591
+ ,589
+ ,2695
+ ,29096
+ ,584
+ ,2799
+ ,26482
+ ,573
+ ,2945
+ ,22405
+ ,567
+ ,2930
+ ,27044
+ ,569
+ ,2318
+ ,17970
+ ,621
+ ,2540
+ ,18730
+ ,629
+ ,2570
+ ,19684
+ ,628
+ ,2669
+ ,19785
+ ,612
+ ,2450
+ ,18479
+ ,595
+ ,2842
+ ,10698
+ ,597
+ ,3439
+ ,31956
+ ,593
+ ,2677
+ ,29506
+ ,590
+ ,2979
+ ,34506
+ ,580
+ ,2257
+ ,27165
+ ,574
+ ,2842
+ ,26736
+ ,573
+ ,2546
+ ,23691
+ ,573
+ ,2455
+ ,18157
+ ,620
+ ,2293
+ ,17328
+ ,626
+ ,2379
+ ,18205
+ ,620
+ ,2478
+ ,20995
+ ,588
+ ,2054
+ ,17382
+ ,566
+ ,2272
+ ,9367
+ ,557
+ ,2351
+ ,31124
+ ,561
+ ,2271
+ ,26551
+ ,549
+ ,2542
+ ,30651
+ ,532
+ ,2304
+ ,25859
+ ,526
+ ,2194
+ ,25100
+ ,511
+ ,2722
+ ,25778
+ ,499
+ ,2395
+ ,20418
+ ,555
+ ,2146
+ ,18688
+ ,565
+ ,1894
+ ,20424
+ ,542
+ ,2548
+ ,24776
+ ,527
+ ,2087
+ ,19814
+ ,510
+ ,2063
+ ,12738
+ ,514
+ ,2481
+ ,31566
+ ,517
+ ,2476
+ ,30111
+ ,508
+ ,2212
+ ,30019
+ ,493
+ ,2834
+ ,31934
+ ,490
+ ,2148
+ ,25826
+ ,469
+ ,2598
+ ,26835
+ ,478)
+ ,dim=c(3
+ ,72)
+ ,dimnames=list(c('bouwverg'
+ ,'inschrNwagens'
+ ,'totwerkl')
+ ,1:72))
>  y <- array(NA,dim=c(3,72),dimnames=list(c('bouwverg','inschrNwagens','totwerkl'),1:72))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 72 members at h = 220411]
  |--[dendrogram w/ 2 branches and 31 members at h = 46113]
  |  |--[dendrogram w/ 2 branches and 6 members at h = 7100]
  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 1996]
  |  |  |  |--leaf "54" 
  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 1287]
  |  |  |     |--leaf "6" 
  |  |  |     `--leaf "42" 
  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2686]
  |  |     |--leaf "18" 
  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 1076]
  |  |        |--leaf "30" 
  |  |        `--leaf "66" 
  |  `--[dendrogram w/ 2 branches and 25 members at h = 21195]
  |     |--[dendrogram w/ 2 branches and 14 members at h = 3977]
  |     |  |--[dendrogram w/ 2 branches and 6 members at h = 919]
  |     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 263]
  |     |  |  |  |--leaf "50" 
  |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 200]
  |     |  |  |     |--leaf "26" 
  |     |  |  |     `--leaf "53" 
  |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 380]
  |     |  |     |--leaf "17" 
  |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 291]
  |     |  |        |--leaf "2" 
  |     |  |        `--leaf "5" 
  |     |  `--[dendrogram w/ 2 branches and 8 members at h = 1406]
  |     |     |--[dendrogram w/ 2 branches and 3 members at h = 425]
  |     |     |  |--leaf "62" 
  |     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 269]
  |     |     |     |--leaf "38" 
  |     |     |     `--leaf "41" 
  |     |     `--[dendrogram w/ 2 branches and 5 members at h = 601]
  |     |        |--leaf "14" 
  |     |        `--[dendrogram w/ 2 branches and 4 members at h = 428]
  |     |           |--[dendrogram w/ 2 branches and 2 members at h = 89.9]
  |     |           |  |--leaf "49" 
  |     |           |  `--leaf "51" 
  |     |           `--[dendrogram w/ 2 branches and 2 members at h = 169]
  |     |              |--leaf "25" 
  |     |              `--leaf "37" 
  |     `--[dendrogram w/ 2 branches and 11 members at h = 4029]
  |        |--[dendrogram w/ 2 branches and 4 members at h = 953]
  |        |  |--[dendrogram w/ 2 branches and 2 members at h = 142]
  |        |  |  |--leaf "39" 
  |        |  |  `--leaf "40" 
  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 651]
  |        |     |--leaf "29" 
  |        |     `--leaf "65" 
  |        `--[dendrogram w/ 2 branches and 7 members at h = 2011]
  |           |--[dendrogram w/ 2 branches and 2 members at h = 336]
  |           |  |--leaf "3" 
  |           |  `--leaf "13" 
  |           `--[dendrogram w/ 2 branches and 5 members at h = 899]
  |              |--[dendrogram w/ 2 branches and 2 members at h = 313]
  |              |  |--leaf "15" 
  |              |  `--leaf "52" 
  |              `--[dendrogram w/ 2 branches and 3 members at h = 430]
  |                 |--leaf "63" 
  |                 `--[dendrogram w/ 2 branches and 2 members at h = 257]
  |                    |--leaf "27" 
  |                    `--leaf "61" 
  `--[dendrogram w/ 2 branches and 41 members at h = 77866]
     |--[dendrogram w/ 2 branches and 16 members at h = 13662]
     |  |--[dendrogram w/ 2 branches and 8 members at h = 1867]
     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 772]
     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 101]
     |  |  |  |  |--leaf "9" 
     |  |  |  |  `--leaf "20" 
     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 410]
     |  |  |     |--leaf "33" 
     |  |  |     `--leaf "44" 
     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 937]
     |  |     |--leaf "57" 
     |  |     `--[dendrogram w/ 2 branches and 3 members at h = 395]
     |  |        |--leaf "31" 
     |  |        `--[dendrogram w/ 2 branches and 2 members at h = 280]
     |  |           |--leaf "68" 
     |  |           `--leaf "69" 
     |  `--[dendrogram w/ 2 branches and 8 members at h = 9026]
     |     |--[dendrogram w/ 2 branches and 6 members at h = 1566]
     |     |  |--[dendrogram w/ 2 branches and 3 members at h = 571]
     |     |  |  |--leaf "7" 
     |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 463]
     |     |  |     |--leaf "55" 
     |     |  |     `--leaf "67" 
     |     |  `--[dendrogram w/ 2 branches and 3 members at h = 971]
     |     |     |--leaf "43" 
     |     |     `--[dendrogram w/ 2 branches and 2 members at h = 492]
     |     |        |--leaf "22" 
     |     |        `--leaf "70" 
     |     `--[dendrogram w/ 2 branches and 2 members at h = 1938]
     |        |--leaf "21" 
     |        `--leaf "45" 
     `--[dendrogram w/ 2 branches and 25 members at h = 22130]
        |--[dendrogram w/ 2 branches and 13 members at h = 4546]
        |  |--[dendrogram w/ 2 branches and 5 members at h = 781]
        |  |  |--[dendrogram w/ 2 branches and 2 members at h = 305]
        |  |  |  |--leaf "32" 
        |  |  |  `--leaf "60" 
        |  |  `--[dendrogram w/ 2 branches and 3 members at h = 316]
        |  |     |--leaf "10" 
        |  |     `--[dendrogram w/ 2 branches and 2 members at h = 169]
        |  |        |--leaf "58" 
        |  |        `--leaf "71" 
        |  `--[dendrogram w/ 2 branches and 8 members at h = 1795]
        |     |--[dendrogram w/ 2 branches and 4 members at h = 491]
        |     |  |--leaf "36" 
        |     |  `--[dendrogram w/ 2 branches and 3 members at h = 379]
        |     |     |--leaf "72" 
        |     |     `--[dendrogram w/ 2 branches and 2 members at h = 258]
        |     |        |--leaf "34" 
        |     |        `--leaf "47" 
        |     `--[dendrogram w/ 2 branches and 4 members at h = 1434]
        |        |--leaf "19" 
        |        `--[dendrogram w/ 2 branches and 3 members at h = 718]
        |           |--leaf "56" 
        |           `--[dendrogram w/ 2 branches and 2 members at h = 443]
        |              |--leaf "8" 
        |              `--leaf "46" 
        `--[dendrogram w/ 2 branches and 12 members at h = 7920]
           |--[dendrogram w/ 2 branches and 5 members at h = 955]
           |  |--leaf "35" 
           |  `--[dendrogram w/ 2 branches and 4 members at h = 572]
           |     |--leaf "11" 
           |     `--[dendrogram w/ 2 branches and 3 members at h = 326]
           |        |--leaf "28" 
           |        `--[dendrogram w/ 2 branches and 2 members at h = 154]
           |           |--leaf "1" 
           |           `--leaf "23" 
           `--[dendrogram w/ 2 branches and 7 members at h = 2207]
              |--[dendrogram w/ 2 branches and 3 members at h = 865]
              |  |--leaf "4" 
              |  `--[dendrogram w/ 2 branches and 2 members at h = 255]
              |     |--leaf "16" 
              |     `--leaf "59" 
              `--[dendrogram w/ 2 branches and 4 members at h = 1375]
                 |--[dendrogram w/ 2 branches and 2 members at h = 312]
                 |  |--leaf "12" 
                 |  `--leaf "48" 
                 `--[dendrogram w/ 2 branches and 2 members at h = 654]
                    |--leaf "24" 
                    `--leaf "64" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/13nnl1226398388.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=10.666666666667) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/2mgmy1226398388.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=10.666666666667) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/351e81226398388.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4p72t1226398388.tab") 
+ }
> 
> system("convert tmp/13nnl1226398388.ps tmp/13nnl1226398388.png")
> system("convert tmp/2mgmy1226398388.ps tmp/2mgmy1226398388.png")
convert: unable to open image `tmp/2mgmy1226398388.ps': No such file or directory.
convert: missing an image filename `tmp/2mgmy1226398388.png'.
> 
> 
> proc.time()
   user  system elapsed 
  1.647   0.337   1.732