R version 2.7.2 (2008-08-25)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> x <- array(list(3353
+ ,2341
+ ,820
+ ,3480
+ ,2540
+ ,829
+ ,3098
+ ,2371
+ ,677
+ ,2944
+ ,2122
+ ,720
+ ,3389
+ ,2301
+ ,846
+ ,3497
+ ,2512
+ ,842
+ ,4404
+ ,3145
+ ,1137
+ ,3849
+ ,2741
+ ,961
+ ,3734
+ ,2548
+ ,1008
+ ,3060
+ ,1987
+ ,872
+ ,3507
+ ,2281
+ ,1094
+ ,3287
+ ,2016
+ ,905
+ ,3215
+ ,2434
+ ,622
+ ,3764
+ ,2637
+ ,1068
+ ,2734
+ ,1831
+ ,760
+ ,2837
+ ,1851
+ ,809
+ ,2766
+ ,1839
+ ,838
+ ,3851
+ ,2609
+ ,1008
+ ,3289
+ ,2417
+ ,838
+ ,3848
+ ,2394
+ ,1057
+ ,3348
+ ,2372
+ ,904
+ ,3682
+ ,2717
+ ,803
+ ,4058
+ ,2998
+ ,810
+ ,3655
+ ,2538
+ ,992
+ ,3811
+ ,3007
+ ,667
+ ,3341
+ ,2475
+ ,803
+ ,3032
+ ,2175
+ ,611
+ ,3475
+ ,2465
+ ,712
+ ,3353
+ ,2279
+ ,785
+ ,3186
+ ,2323
+ ,599
+ ,3902
+ ,2746
+ ,1008
+ ,4164
+ ,2601
+ ,1136
+ ,3499
+ ,2486
+ ,931
+ ,4145
+ ,2718
+ ,1051
+ ,3796
+ ,2646
+ ,956
+ ,3711
+ ,2551
+ ,1006
+ ,3949
+ ,2712
+ ,1077
+ ,3740
+ ,2606
+ ,772
+ ,3243
+ ,2365
+ ,679
+ ,4407
+ ,3533
+ ,787
+ ,4814
+ ,3509
+ ,1011
+ ,3908
+ ,2912
+ ,701
+ ,5250
+ ,3599
+ ,1269
+ ,3937
+ ,2719
+ ,1007
+ ,4004
+ ,2869
+ ,1013
+ ,5560
+ ,4085
+ ,1209
+ ,3922
+ ,2686
+ ,1036
+ ,3759
+ ,2545
+ ,1084
+ ,4138
+ ,3071
+ ,926
+ ,4634
+ ,3388
+ ,1083
+ ,3996
+ ,2652
+ ,912
+ ,4308
+ ,3190
+ ,910
+ ,4142
+ ,2884
+ ,886
+ ,4429
+ ,3295
+ ,948
+ ,5219
+ ,3818
+ ,1134
+ ,4929
+ ,3226
+ ,1226
+ ,5754
+ ,3953
+ ,1515
+ ,5592
+ ,3810
+ ,1491
+ ,4163
+ ,2877
+ ,1086
+ ,4962
+ ,3515
+ ,1274
+ ,5208
+ ,3708
+ ,1164
+ ,4755
+ ,3450
+ ,1205
+ ,4491
+ ,3360
+ ,966
+ ,5732
+ ,4110
+ ,1462
+ ,5730
+ ,4384
+ ,1134
+ ,5024
+ ,3729
+ ,1141
+ ,6056
+ ,4263
+ ,1676
+ ,4901
+ ,3505
+ ,1166
+ ,5353
+ ,3674
+ ,1492
+ ,5578
+ ,3911
+ ,1413
+ ,4618
+ ,2951
+ ,1287
+ ,4724
+ ,3317
+ ,1206
+ ,5011
+ ,3417
+ ,1054
+ ,5298
+ ,3498
+ ,1236
+ ,4143
+ ,2768
+ ,1069
+ ,4617
+ ,2899
+ ,1264
+ ,4727
+ ,3171
+ ,1318
+ ,4207
+ ,3004
+ ,1093
+ ,5112
+ ,3481
+ ,1495
+ ,4190
+ ,3016
+ ,1121
+ ,4098
+ ,2595
+ ,1342
+ ,5071
+ ,3509
+ ,1335
+ ,4177
+ ,2833
+ ,1261
+ ,4598
+ ,3125
+ ,1317
+ ,3757
+ ,2556
+ ,867
+ ,5591
+ ,3628
+ ,1428
+ ,4218
+ ,2876
+ ,1199
+ ,3780
+ ,2575
+ ,961
+ ,4336
+ ,2903
+ ,1195
+ ,4870
+ ,3438
+ ,1225
+ ,4422
+ ,2926
+ ,1282
+ ,4727
+ ,3068
+ ,1629
+ ,4459
+ ,3015
+ ,1187)
+ ,dim=c(3
+ ,93)
+ ,dimnames=list(c('Bel'
+ ,'VL'
+ ,'WL')
+ ,1:93))
>  y <- array(NA,dim=c(3,93),dimnames=list(c('Bel','VL','WL'),1:93))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = '3'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 93 members at h = 44633]
  |--[dendrogram w/ 2 branches and 38 members at h = 10608]
  |  |--[dendrogram w/ 2 branches and 21 members at h = 2385]
  |  |  |--[dendrogram w/ 2 branches and 10 members at h = 981]
  |  |  |  |--[dendrogram w/ 2 branches and 4 members at h = 453]
  |  |  |  |  |--leaf "92" 
  |  |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 345]
  |  |  |  |     |--leaf "56" 
  |  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 137]
  |  |  |  |        |--leaf "77" 
  |  |  |  |        `--leaf "84" 
  |  |  |  `--[dendrogram w/ 2 branches and 6 members at h = 469]
  |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 56.9]
  |  |  |     |  |--leaf "71" 
  |  |  |     |  `--leaf "76" 
  |  |  |     `--[dendrogram w/ 2 branches and 4 members at h = 274]
  |  |  |        |--[dendrogram w/ 2 branches and 2 members at h = 124]
  |  |  |        |  |--leaf "89" 
  |  |  |        |  `--leaf "91" 
  |  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 150]
  |  |  |           |--leaf "7" 
  |  |  |           `--leaf "93" 
  |  |  `--[dendrogram w/ 2 branches and 11 members at h = 1638]
  |  |     |--[dendrogram w/ 2 branches and 4 members at h = 379]
  |  |     |  |--leaf "40" 
  |  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 250]
  |  |     |     |--leaf "52" 
  |  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 91.6]
  |  |     |        |--leaf "54" 
  |  |     |        `--leaf "63" 
  |  |     `--[dendrogram w/ 2 branches and 7 members at h = 446]
  |  |        |--[dendrogram w/ 2 branches and 3 members at h = 188]
  |  |        |  |--leaf "50" 
  |  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 137]
  |  |        |     |--leaf "62" 
  |  |        |     `--leaf "72" 
  |  |        `--[dendrogram w/ 2 branches and 4 members at h = 248]
  |  |           |--[dendrogram w/ 2 branches and 2 members at h = 94.5]
  |  |           |  |--leaf "68" 
  |  |           |  `--leaf "90" 
  |  |           `--[dendrogram w/ 2 branches and 2 members at h = 222]
  |  |              |--leaf "41" 
  |  |              `--leaf "73" 
  |  `--[dendrogram w/ 2 branches and 17 members at h = 3313]
  |     |--[dendrogram w/ 2 branches and 8 members at h = 689]
  |     |  |--[dendrogram w/ 2 branches and 3 members at h = 250]
  |     |  |  |--leaf "79" 
  |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 125]
  |     |  |     |--leaf "60" 
  |     |  |     `--leaf "82" 
  |     |  `--[dendrogram w/ 2 branches and 5 members at h = 457]
  |     |     |--[dendrogram w/ 2 branches and 2 members at h = 117]
  |     |     |  |--leaf "43" 
  |     |     |  `--leaf "74" 
  |     |     `--[dendrogram w/ 2 branches and 3 members at h = 229]
  |     |        |--leaf "66" 
  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 115]
  |     |           |--leaf "55" 
  |     |           `--leaf "61" 
  |     `--[dendrogram w/ 2 branches and 9 members at h = 1185]
  |        |--[dendrogram w/ 2 branches and 4 members at h = 354]
  |        |  |--[dendrogram w/ 2 branches and 2 members at h = 128]
  |        |  |  |--leaf "58" 
  |        |  |  `--leaf "70" 
  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 251]
  |        |     |--leaf "69" 
  |        |     `--leaf "86" 
  |        `--[dendrogram w/ 2 branches and 5 members at h = 727]
  |           |--[dendrogram w/ 2 branches and 2 members at h = 352]
  |           |  |--leaf "46" 
  |           |  `--leaf "65" 
  |           `--[dendrogram w/ 2 branches and 3 members at h = 530]
  |              |--leaf "67" 
  |              `--[dendrogram w/ 2 branches and 2 members at h = 167]
  |                 |--leaf "57" 
  |                 `--leaf "64" 
  `--[dendrogram w/ 2 branches and 55 members at h = 14067]
     |--[dendrogram w/ 2 branches and 22 members at h = 2951]
     |  |--[dendrogram w/ 2 branches and 11 members at h = 616]
     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 209]
     |  |  |  |--leaf "28" 
     |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 128]
     |  |  |     |--leaf "33" 
     |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 35.2]
     |  |  |        |--leaf "2" 
     |  |  |        `--leaf "6" 
     |  |  `--[dendrogram w/ 2 branches and 7 members at h = 472]
     |  |     |--leaf "11" 
     |  |     `--[dendrogram w/ 2 branches and 6 members at h = 247]
     |  |        |--[dendrogram w/ 2 branches and 3 members at h = 77]
     |  |        |  |--leaf "29" 
     |  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 59.8]
     |  |        |     |--leaf "1" 
     |  |        |     `--leaf "5" 
     |  |        `--[dendrogram w/ 2 branches and 3 members at h = 134]
     |  |           |--leaf "21" 
     |  |           `--[dendrogram w/ 2 branches and 2 members at h = 85.4]
     |  |              |--leaf "19" 
     |  |              `--leaf "26" 
     |  `--[dendrogram w/ 2 branches and 11 members at h = 1699]
     |     |--[dendrogram w/ 2 branches and 3 members at h = 108]
     |     |  |--leaf "15" 
     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 77.6]
     |     |     |--leaf "16" 
     |     |     `--leaf "17" 
     |     `--[dendrogram w/ 2 branches and 8 members at h = 926]
     |        |--[dendrogram w/ 2 branches and 4 members at h = 155]
     |        |  |--leaf "3" 
     |        |  `--[dendrogram w/ 2 branches and 3 members at h = 118]
     |        |     |--leaf "30" 
     |        |     `--[dendrogram w/ 2 branches and 2 members at h = 93.8]
     |        |        |--leaf "13" 
     |        |        `--leaf "39" 
     |        `--[dendrogram w/ 2 branches and 4 members at h = 500]
     |           |--[dendrogram w/ 2 branches and 2 members at h = 150]
     |           |  |--leaf "4" 
     |           |  `--leaf "27" 
     |           `--[dendrogram w/ 2 branches and 2 members at h = 231]
     |              |--leaf "10" 
     |              `--leaf "12" 
     `--[dendrogram w/ 2 branches and 33 members at h = 3507]
        |--[dendrogram w/ 2 branches and 18 members at h = 1040]
        |  |--[dendrogram w/ 2 branches and 6 members at h = 213]
        |  |  |--leaf "51" 
        |  |  `--[dendrogram w/ 2 branches and 5 members at h = 141]
        |  |     |--leaf "8" 
        |  |     `--[dendrogram w/ 2 branches and 4 members at h = 88.7]
        |  |        |--[dendrogram w/ 2 branches and 2 members at h = 44.2]
        |  |        |  |--leaf "31" 
        |  |        |  `--leaf "44" 
        |  |        `--[dendrogram w/ 2 branches and 2 members at h = 55.6]
        |  |           |--leaf "37" 
        |  |           `--leaf "47" 
        |  `--[dendrogram w/ 2 branches and 12 members at h = 594]
        |     |--[dendrogram w/ 2 branches and 3 members at h = 176]
        |     |  |--leaf "22" 
        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 109]
        |     |     |--leaf "38" 
        |     |     `--leaf "85" 
        |     `--[dendrogram w/ 2 branches and 9 members at h = 313]
        |        |--leaf "20" 
        |        `--[dendrogram w/ 2 branches and 8 members at h = 254]
        |           |--[dendrogram w/ 2 branches and 3 members at h = 93]
        |           |  |--leaf "18" 
        |           |  `--[dendrogram w/ 2 branches and 2 members at h = 73]
        |           |     |--leaf "35" 
        |           |     `--leaf "88" 
        |           `--[dendrogram w/ 2 branches and 5 members at h = 183]
        |              |--[dendrogram w/ 2 branches and 3 members at h = 85.8]
        |              |  |--leaf "24" 
        |              |  `--[dendrogram w/ 2 branches and 2 members at h = 23.3]
        |              |     |--leaf "9" 
        |              |     `--leaf "36" 
        |              `--[dendrogram w/ 2 branches and 2 members at h = 93.5]
        |                 |--leaf "14" 
        |                 `--leaf "48" 
        `--[dendrogram w/ 2 branches and 15 members at h = 1513]
           |--[dendrogram w/ 2 branches and 5 members at h = 574]
           |  |--[dendrogram w/ 2 branches and 2 members at h = 140]
           |  |  |--leaf "25" 
           |  |  `--leaf "42" 
           |  `--[dendrogram w/ 2 branches and 3 members at h = 182]
           |     |--leaf "53" 
           |     `--[dendrogram w/ 2 branches and 2 members at h = 159]
           |        |--leaf "23" 
           |        `--leaf "49" 
           `--[dendrogram w/ 2 branches and 10 members at h = 626]
              |--[dendrogram w/ 2 branches and 2 members at h = 216]
              |  |--leaf "32" 
              |  `--leaf "81" 
              `--[dendrogram w/ 2 branches and 8 members at h = 461]
                 |--[dendrogram w/ 2 branches and 4 members at h = 228]
                 |  |--leaf "45" 
                 |  `--[dendrogram w/ 2 branches and 3 members at h = 166]
                 |     |--leaf "59" 
                 |     `--[dendrogram w/ 2 branches and 2 members at h = 53.2]
                 |        |--leaf "34" 
                 |        `--leaf "75" 
                 `--[dendrogram w/ 2 branches and 4 members at h = 340]
                    |--[dendrogram w/ 2 branches and 2 members at h = 34.9]
                    |  |--leaf "78" 
                    |  `--leaf "80" 
                    `--[dendrogram w/ 2 branches and 2 members at h = 85.9]
                       |--leaf "83" 
                       `--leaf "87" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/1ejuw1226403973.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/2hjvc1226403973.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
--[dendrogram w/ 2 branches and 3 members at h = 2045]
  |--leaf 2 
  `--[dendrogram w/ 2 branches and 2 members at h = 885]
     |--leaf 1 
     `--leaf 3 
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/3ekm51226403973.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4w54y1226403973.tab") 
+ }
> 
> system("convert tmp/1ejuw1226403973.ps tmp/1ejuw1226403973.png")
> system("convert tmp/2hjvc1226403973.ps tmp/2hjvc1226403973.png")
> 
> 
> proc.time()
   user  system elapsed 
  1.082   0.323   1.251