R version 2.7.0 (2008-04-22)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> x <- array(list(91.2,99.2,108.2,101.5,106.9,104.4,77.9,60,99.5,95,105.6,102.5,93.3,97.3,127,111.7,96.4,133,72.2,95.8,124.1,127.6,110.7,104.6,112.7,115.3,139.4,119,97.4,154,81.5,88.8,127.7,105.1,114.9,106.4,104.5,121.6,141.4,99,126.7,134.1,81.3,88.6,132.7,132.9,134.4,103.7,119.7,115,132.9,108.5,113.9,142,97.7,92.2,128.8,134.9,128.2,114.8),dim=c(1,60),dimnames=list(c(''),1:60))
>  y <- array(NA,dim=c(1,60),dimnames=list(c(''),1:60))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 60 members at h = 578]
  |--[dendrogram w/ 2 branches and 21 members at h = 78.5]
  |  |--[dendrogram w/ 2 branches and 10 members at h = 24.5]
  |  |  |--[dendrogram w/ 2 branches and 6 members at h = 2.38]
  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.3]
  |  |  |  |  |--leaf "15" 
  |  |  |  |  `--leaf "41" 
  |  |  |  `--[dendrogram w/ 2 branches and 4 members at h = 1.35]
  |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |  |  |     |  |--leaf "22" 
  |  |  |     |  `--leaf "33" 
  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 0.6]
  |  |  |        |--leaf "57" 
  |  |  |        `--leaf "59" 
  |  |  `--[dendrogram w/ 2 branches and 4 members at h = 5.4]
  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0.7]
  |  |     |  |--leaf "28" 
  |  |     |  `--leaf "49" 
  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.5]
  |  |        |--leaf "21" 
  |  |        `--leaf "38" 
  |  `--[dendrogram w/ 2 branches and 11 members at h = 37.8]
  |     |--[dendrogram w/ 2 branches and 7 members at h = 4.65]
  |     |  |--[dendrogram w/ 2 branches and 4 members at h = 0.317]
  |     |  |  |--leaf "45" 
  |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 0.133]
  |     |  |     |--leaf "18" 
  |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 0]
  |     |  |        |--leaf "46" 
  |     |  |        `--leaf "51" 
  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 0.767]
  |     |     |--leaf "58" 
  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 0.3]
  |     |        |--leaf "42" 
  |     |        `--leaf "47" 
  |     `--[dendrogram w/ 2 branches and 4 members at h = 18.7]
  |        |--leaf "30" 
  |        `--[dendrogram w/ 2 branches and 3 members at h = 2.87]
  |           |--leaf "27" 
  |           `--[dendrogram w/ 2 branches and 2 members at h = 0.6]
  |              |--leaf "39" 
  |              `--leaf "54" 
  `--[dendrogram w/ 2 branches and 39 members at h = 205]
     |--[dendrogram w/ 2 branches and 18 members at h = 54]
     |  |--[dendrogram w/ 2 branches and 8 members at h = 7.95]
     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 0.533]
     |  |  |  |--leaf "26" 
     |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 0.167]
     |  |  |     |--leaf "60" 
     |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
     |  |  |        |--leaf "35" 
     |  |  |        `--leaf "50" 
     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 3.1]
     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 1]
     |  |     |  |--leaf "16" 
     |  |     |  `--leaf "23" 
     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 1.2]
     |  |        |--leaf "25" 
     |  |        `--leaf "53" 
     |  `--[dendrogram w/ 2 branches and 10 members at h = 9.84]
     |     |--[dendrogram w/ 2 branches and 6 members at h = 2]
     |     |  |--[dendrogram w/ 2 branches and 2 members at h = 0.5]
     |     |  |  |--leaf "11" 
     |     |  |  `--leaf "34" 
     |     |  `--[dendrogram w/ 2 branches and 4 members at h = 1.13]
     |     |     |--leaf "48" 
     |     |     `--[dendrogram w/ 2 branches and 3 members at h = 0.167]
     |     |        |--leaf "24" 
     |     |        `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
     |     |           |--leaf "6" 
     |     |           `--leaf "37" 
     |     `--[dendrogram w/ 2 branches and 4 members at h = 3]
     |        |--[dendrogram w/ 2 branches and 2 members at h = 0.3]
     |        |  |--leaf "3" 
     |        |  `--leaf "52" 
     |        `--[dendrogram w/ 2 branches and 2 members at h = 0.5]
     |           |--leaf "5" 
     |           `--leaf "36" 
     `--[dendrogram w/ 2 branches and 21 members at h = 114]
        |--[dendrogram w/ 2 branches and 5 members at h = 26.0]
        |  |--leaf "8" 
        |  `--[dendrogram w/ 2 branches and 4 members at h = 10.8]
        |     |--leaf "19" 
        |     `--[dendrogram w/ 2 branches and 3 members at h = 4.6]
        |        |--leaf "7" 
        |        `--[dendrogram w/ 2 branches and 2 members at h = 0.2]
        |           |--leaf "31" 
        |           `--leaf "43" 
        `--[dendrogram w/ 2 branches and 16 members at h = 35.9]
           |--[dendrogram w/ 2 branches and 5 members at h = 7.24]
           |  |--[dendrogram w/ 2 branches and 2 members at h = 0.2]
           |  |  |--leaf "32" 
           |  |  `--leaf "44" 
           |  `--[dendrogram w/ 2 branches and 3 members at h = 1.8]
           |     |--leaf "13" 
           |     `--[dendrogram w/ 2 branches and 2 members at h = 1]
           |        |--leaf "1" 
           |        `--leaf "56" 
           `--[dendrogram w/ 2 branches and 11 members at h = 13.4]
              |--[dendrogram w/ 2 branches and 6 members at h = 4]
              |  |--[dendrogram w/ 2 branches and 3 members at h = 0.433]
              |  |  |--leaf "55" 
              |  |  `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
              |  |     |--leaf "14" 
              |  |     `--leaf "29" 
              |  `--[dendrogram w/ 2 branches and 3 members at h = 1.27]
              |     |--leaf "10" 
              |     `--[dendrogram w/ 2 branches and 2 members at h = 0.6]
              |        |--leaf "17" 
              |        `--leaf "20" 
              `--[dendrogram w/ 2 branches and 5 members at h = 5.77]
                 |--[dendrogram w/ 2 branches and 3 members at h = 0.467]
                 |  |--leaf "9" 
                 |  `--[dendrogram w/ 2 branches and 2 members at h = 0.2]
                 |     |--leaf "2" 
                 |     `--leaf "40" 
                 `--[dendrogram w/ 2 branches and 2 members at h = 1]
                    |--leaf "4" 
                    `--leaf "12" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/1ttmv1226413996.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/21k8t1226413996.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/330ri1226413996.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4s5mv1226413996.tab") 
+ }
> 
> system("convert tmp/1ttmv1226413996.ps tmp/1ttmv1226413996.png")
> system("convert tmp/21k8t1226413996.ps tmp/21k8t1226413996.png")
convert: unable to open image `tmp/21k8t1226413996.ps': No such file or directory.
convert: missing an image filename `tmp/21k8t1226413996.png'.
> 
> 
> proc.time()
   user  system elapsed 
  1.503   0.303   1.583