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Type 'q()' to quit R. > y <- c(145.9,158.5,152.2,153.7,157.9,154.4,150.7,151.2,147.3,146.6,145.2,139.3,145.7,163.3,181.8,188.1,222.9,206.3,184.9,183.6,186.6,176.5,173.9,184.9,182.5,183.6,172.4,168.9,163.3,152.4,145.8,148.6,143.4,141.2,144.6,144.5,140.8,133.3,127.3,119.6,120.2,121.9,112.4,111,107.8,110.5,118.3,123,112.1,104.2,102.4,100.3,102.6,101.5,103.4,99.4,97.9,98,90.2,87.1,91.8,94.8,91.8,89.3,91.7,86.2,82.8,82.3,79.8,79.4,85.3,87.5,88.3,88.6,94.9,94.7,92.6,91.8,96.4,96.4,107.1,111.9,107.8,109.2,115.3,119.2,107.8,106.8,104.2,94.8,97.5,98.3,100.6,94.9,93.6,98,104.3,103.9,105.3,102.6,103.3,107.9,107.8,109.8,110.6,110.8,119.3,128.1,127.6,137.9,151.4,143.6,143.4,141.9,135.2,133.1,129.6,134.1,136.8,143.5,162.5,163.1,157.2,158.8,155.4,148.5,154.2,153.3,149.4,147.9,156,163,159.1,159.5,157.3,156.4,156.6,162.4,166.8,162.6,168.1) > x <- c(145.3,143.6,142.8,155.9,156.2,149.8,152.7,155.5,159.3,143,141.4,142.8,146.4,152.3,164.3,168,171.3,162.7,150.2,142.5,138.2,138,145.1,138.4,131.8,130.8,126.3,123,124,120.8,122.1,106.5,104.3,108.7,113.8,112.5,106.1,98.4,96,99.3,97.5,95.3,88,94.7,99.4,98.9,96.4,95.3,99.5,101.6,103.9,106.6,108.3,102,93.8,91.6,97.7,94.8,98,103.8,97.8,91.2,89.3,87.5,90.4,94.2,102.2,101.3,96,90.8,93.2,90.9,91.1,90.2,94.3,96,99,103.3,113.1,112.8,112.1,107.4,111,110.5,110.8,112.4,111.5,116.2,122.5,121.3,113.9,110.7,120.8,141.1,147.4,148,158.1,165,187,190.3,182.4,168.8,151.2,120.1,112.5,106.2,107.1,108.5,106.5,108.3,125.6,124,127.2,136.9,135.8,124.3,115.4,113.6,114.4,118.4,117,116.5,115.4,113.6,117.4,116.9,116.4,111.1,110.2,118.9,131.8,130.6,138.3,148.4,148.7,144.3,152.5,162.9,167.2,166.5,185.6) > par7 = 'Y' > par6 = 'Y' > par5 = '0' > par4 = '0' > par3 = '0' > par2 = '50' > par1 = '50' > ylab = 'y' > xlab = 'x' > main = 'Bivariate Kernel Density' > #'GNU S' R Code compiled by R2WASP v. 1.0.44 () > #Author: Prof. Dr. P. Wessa > #To cite this work: WESSA, (2007), Bivariate Kernel Density Estimation (v1.0.5) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_bidensity.wasp/ > #Source of accompanying publication: Lucy, D. Aykroyd, R.G. & Pollard, A.M.(2002) Non-parametric calibration for age estimation. Applied Statistics 51(2): 183-196 > #Technical description: This code makes use of the GenKern package. The dataset is based on http://exploringdata.cqu.edu.au/datasets/chirps.tab : x = temperature (degrees F) and y = chirps per second of crickets (insects). > par1 <- as(par1,'numeric') > par2 <- as(par2,'numeric') > par3 <- as(par3,'numeric') > par4 <- as(par4,'numeric') > par5 <- as(par5,'numeric') > library('GenKern') Loading required package: KernSmooth KernSmooth 2.22 installed Copyright M. P. Wand 1997 Loading GenKern version 1.1 Copyright Lucy and Aykroyd 2000 last update October 2004 requires KernSmooth Package GenKern installed > if (par3==0) par3 <- dpik(x) > if (par4==0) par4 <- dpik(y) > if (par5==0) par5 <- cor(x,y) > if (par1 > 500) par1 <- 500 > if (par2 > 500) par2 <- 500 > postscript(file="/var/www/html/rcomp/tmp/17vy71226419189.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > op <- KernSur(x,y, xgridsize=par1, ygridsize=par2, correlation=par5, xbandwidth=par3, ybandwidth=par4) > image(op$xords, op$yords, op$zden, col=terrain.colors(100), axes=TRUE,main=main,xlab=xlab,ylab=ylab) > if (par6=='Y') contour(op$xords, op$yords, op$zden, add=TRUE) > if (par7=='Y') points(x,y) > (r<-lm(y ~ x)) Call: lm(formula = y ~ x) Coefficients: (Intercept) x 44.6499 0.6937 > abline(r) > box() > dev.off() null device 1 > > #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/www/html/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Bandwidth',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'x axis',header=TRUE) > a<-table.element(a,par3) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'y axis',header=TRUE) > a<-table.element(a,par4) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Correlation',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'correlation used in KDE',header=TRUE) > a<-table.element(a,par5) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'correlation(x,y)',header=TRUE) > a<-table.element(a,cor(x,y)) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/www/html/rcomp/tmp/2zsgm1226419189.tab") > > system("convert tmp/17vy71226419189.ps tmp/17vy71226419189.png") > > > proc.time() user system elapsed 1.544 0.470 1.602