R version 2.7.2 (2008-08-25)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

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Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
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> x <- array(list(1515
+ ,2718
+ ,524944
+ ,292792
+ ,1510
+ ,2646
+ ,568106
+ ,318530
+ ,1225
+ ,2551
+ ,484506
+ ,276807
+ ,1577
+ ,2712
+ ,512235
+ ,284524
+ ,1417
+ ,2606
+ ,523179
+ ,290486
+ ,1224
+ ,2365
+ ,462411
+ ,259355
+ ,1693
+ ,3533
+ ,685872
+ ,383556
+ ,1633
+ ,3509
+ ,635902
+ ,350488
+ ,1639
+ ,2912
+ ,573599
+ ,318029
+ ,1914
+ ,3599
+ ,668826
+ ,377740
+ ,1586
+ ,2719
+ ,520868
+ ,293546
+ ,1552
+ ,2869
+ ,555680
+ ,317460
+ ,2081
+ ,4085
+ ,727941
+ ,401629
+ ,1500
+ ,2686
+ ,516959
+ ,282854
+ ,1437
+ ,2545
+ ,489975
+ ,275316
+ ,1470
+ ,3071
+ ,559687
+ ,304680
+ ,1849
+ ,3388
+ ,630947
+ ,349947
+ ,1387
+ ,2652
+ ,473994
+ ,266543
+ ,1592
+ ,3190
+ ,583802
+ ,329195
+ ,1589
+ ,2884
+ ,553061
+ ,314626
+ ,1798
+ ,3295
+ ,604700
+ ,338463
+ ,1935
+ ,3818
+ ,708101
+ ,399338
+ ,1887
+ ,3226
+ ,617053
+ ,339542
+ ,2027
+ ,3953
+ ,819858
+ ,454688
+ ,2080
+ ,3810
+ ,736520
+ ,396766
+ ,1556
+ ,2877
+ ,567696
+ ,309465
+ ,1682
+ ,3515
+ ,666627
+ ,365707
+ ,1785
+ ,3708
+ ,701749
+ ,383677
+ ,1869
+ ,3450
+ ,647394
+ ,352609
+ ,1781
+ ,3360
+ ,610231
+ ,340011
+ ,2082
+ ,4110
+ ,777555
+ ,425915
+ ,2570
+ ,4384
+ ,901319
+ ,498938
+ ,1862
+ ,3729
+ ,707164
+ ,391142
+ ,1936
+ ,4263
+ ,782859
+ ,418962
+ ,1504
+ ,3505
+ ,652556
+ ,342378
+ ,1765
+ ,3674
+ ,676064
+ ,369674
+ ,1607
+ ,3911
+ ,707665
+ ,391250
+ ,1577
+ ,2951
+ ,561515
+ ,310589
+ ,1493
+ ,3317
+ ,645794
+ ,335910
+ ,1615
+ ,3417
+ ,623482
+ ,344448
+ ,1700
+ ,3498
+ ,673401
+ ,361944
+ ,1335
+ ,2768
+ ,544890
+ ,290274
+ ,1523
+ ,2899
+ ,605125
+ ,327902
+ ,1623
+ ,3179
+ ,608393
+ ,330268
+ ,1540
+ ,3011
+ ,579718
+ ,324957
+ ,1637
+ ,3481
+ ,647499
+ ,350780
+ ,1524
+ ,3015
+ ,575016
+ ,320017
+ ,1419
+ ,2606
+ ,510096
+ ,278970
+ ,1821
+ ,3530
+ ,697835
+ ,383097
+ ,1593
+ ,2827
+ ,561177
+ ,301300
+ ,1357
+ ,3120
+ ,584949
+ ,318259
+ ,1263
+ ,2557
+ ,516723
+ ,266891
+ ,1750
+ ,3645
+ ,695323
+ ,384327
+ ,1405
+ ,2865
+ ,548018
+ ,294991
+ ,1393
+ ,2587
+ ,497706
+ ,267257
+ ,1639
+ ,2887
+ ,559796
+ ,310886
+ ,1679
+ ,3429
+ ,669449
+ ,359118
+ ,1551
+ ,2956
+ ,583301
+ ,314124
+ ,1744
+ ,3098
+ ,626790
+ ,340377
+ ,1429
+ ,2934
+ ,580268
+ ,309894
+ ,1784
+ ,3269
+ ,649016
+ ,353873)
+ ,dim=c(4
+ ,61)
+ ,dimnames=list(c('x1'
+ ,'x2'
+ ,'x3'
+ ,'x4')
+ ,1:61))
>  y <- array(NA,dim=c(4,61),dimnames=list(c('x1','x2','x3','x4'),1:61))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par20 = ''
> par19 = ''
> par18 = ''
> par17 = ''
> par16 = ''
> par15 = ''
> par14 = ''
> par13 = ''
> par12 = ''
> par11 = ''
> par10 = ''
> par9 = ''
> par8 = ''
> par7 = ''
> par6 = ''
> par5 = ''
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = ''
> xlab = ''
> main = ''
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 61 members at h = 2946281]
  |--[dendrogram w/ 2 branches and 29 members at h = 713659]
  |  |--[dendrogram w/ 2 branches and 17 members at h = 131591]
  |  |  |--[dendrogram w/ 2 branches and 8 members at h = 25485]
  |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 8377]
  |  |  |  |  |--leaf "60" 
  |  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 4459]
  |  |  |  |     |--leaf "51" 
  |  |  |  |     `--leaf "58" 
  |  |  |  `--[dendrogram w/ 2 branches and 5 members at h = 22919]
  |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 5889]
  |  |  |     |  |--leaf "19" 
  |  |  |     |  `--leaf "45" 
  |  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 7586]
  |  |  |        |--leaf "2" 
  |  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 2446]
  |  |  |           |--leaf "9" 
  |  |  |           `--leaf "47" 
  |  |  `--[dendrogram w/ 2 branches and 9 members at h = 53198]
  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 5661]
  |  |     |  |--leaf "42" 
  |  |     |  `--leaf "54" 
  |  |     `--[dendrogram w/ 2 branches and 7 members at h = 23943]
  |  |        |--[dendrogram w/ 2 branches and 2 members at h = 3859]
  |  |        |  |--leaf "12" 
  |  |        |  `--leaf "20" 
  |  |        `--[dendrogram w/ 2 branches and 5 members at h = 13960]
  |  |           |--[dendrogram w/ 2 branches and 2 members at h = 3704]
  |  |           |  |--leaf "16" 
  |  |           |  `--leaf "50" 
  |  |           `--[dendrogram w/ 2 branches and 3 members at h = 8958]
  |  |              |--leaf "26" 
  |  |              `--[dendrogram w/ 2 branches and 2 members at h = 1747]
  |  |                 |--leaf "38" 
  |  |                 `--leaf "56" 
  |  `--[dendrogram w/ 2 branches and 12 members at h = 154657]
  |     |--[dendrogram w/ 2 branches and 7 members at h = 41122]
  |     |  |--[dendrogram w/ 2 branches and 3 members at h = 4355]
  |     |  |  |--leaf "11" 
  |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2908]
  |     |  |     |--leaf "1" 
  |     |  |     `--leaf "5" 
  |     |  `--[dendrogram w/ 2 branches and 4 members at h = 20830]
  |     |     |--leaf "52" 
  |     |     `--[dendrogram w/ 2 branches and 3 members at h = 7557]
  |     |        |--leaf "48" 
  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 5011]
  |     |           |--leaf "4" 
  |     |           `--leaf "14" 
  |     `--[dendrogram w/ 2 branches and 5 members at h = 44113]
  |        |--[dendrogram w/ 2 branches and 2 members at h = 13636]
  |        |  |--leaf "6" 
  |        |  `--leaf "18" 
  |        `--[dendrogram w/ 2 branches and 3 members at h = 16417]
  |           |--leaf "55" 
  |           `--[dendrogram w/ 2 branches and 2 members at h = 5673]
  |              |--leaf "3" 
  |              `--leaf "15" 
  `--[dendrogram w/ 2 branches and 32 members at h = 1055511]
     |--[dendrogram w/ 2 branches and 19 members at h = 270035]
     |  |--[dendrogram w/ 2 branches and 9 members at h = 67642]
     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 16426]
     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 4046]
     |  |  |  |  |--leaf "43" 
     |  |  |  |  `--leaf "44" 
     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 5744]
     |  |  |     |--leaf "21" 
     |  |  |     `--leaf "30" 
     |  |  `--[dendrogram w/ 2 branches and 5 members at h = 25359]
     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 4991]
     |  |     |  |--leaf "8" 
     |  |     |  `--leaf "17" 
     |  |     `--[dendrogram w/ 2 branches and 3 members at h = 10160]
     |  |        |--leaf "23" 
     |  |        `--[dendrogram w/ 2 branches and 2 members at h = 5257]
     |  |           |--leaf "40" 
     |  |           `--leaf "59" 
     |  `--[dendrogram w/ 2 branches and 10 members at h = 112299]
     |     |--[dendrogram w/ 2 branches and 5 members at h = 19500]
     |     |  |--[dendrogram w/ 2 branches and 3 members at h = 8325]
     |     |  |  |--leaf "27" 
     |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 4859]
     |     |  |     |--leaf "41" 
     |     |  |     `--leaf "57" 
     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 10839]
     |     |     |--leaf "10" 
     |     |     `--leaf "36" 
     |     `--[dendrogram w/ 2 branches and 5 members at h = 25743]
     |        |--[dendrogram w/ 2 branches and 3 members at h = 3065]
     |        |  |--leaf "61" 
     |        |  `--[dendrogram w/ 2 branches and 2 members at h = 1847]
     |        |     |--leaf "29" 
     |        |     `--leaf "46" 
     |        `--[dendrogram w/ 2 branches and 2 members at h = 9359]
     |           |--leaf "35" 
     |           `--leaf "39" 
     `--[dendrogram w/ 2 branches and 13 members at h = 485467]
        |--[dendrogram w/ 2 branches and 9 members at h = 81360]
        |  |--[dendrogram w/ 2 branches and 2 members at h = 9865]
        |  |  |--leaf "13" 
        |  |  `--leaf "25" 
        |  `--[dendrogram w/ 2 branches and 7 members at h = 40012]
        |     |--[dendrogram w/ 2 branches and 3 members at h = 10705]
        |     |  |--leaf "22" 
        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 601]
        |     |     |--leaf "33" 
        |     |     `--leaf "37" 
        |     `--[dendrogram w/ 2 branches and 4 members at h = 16464]
        |        |--leaf "7" 
        |        `--[dendrogram w/ 2 branches and 3 members at h = 6013]
        |           |--leaf "28" 
        |           `--[dendrogram w/ 2 branches and 2 members at h = 2800]
        |              |--leaf "49" 
        |              `--leaf "53" 
        `--[dendrogram w/ 2 branches and 4 members at h = 171113]
           |--leaf "32" 
           `--[dendrogram w/ 2 branches and 3 members at h = 65480]
              |--leaf "24" 
              `--[dendrogram w/ 2 branches and 2 members at h = 8748]
                 |--leaf "31" 
                 `--leaf "34" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/14aib1226430808.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/29xwz1226430808.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/38alh1226430808.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4llix1226430808.tab") 
+ }
> 
> system("convert tmp/14aib1226430808.ps tmp/14aib1226430808.png")
> system("convert tmp/29xwz1226430808.ps tmp/29xwz1226430808.png")
convert: unable to open image `tmp/29xwz1226430808.ps': No such file or directory.
convert: missing an image filename `tmp/29xwz1226430808.png'.
> 
> 
> proc.time()
   user  system elapsed 
  0.791   0.191   0.960