R version 2.7.2 (2008-08-25)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> x <- array(list(5.8
+ ,4.7
+ ,7.3
+ ,5.8
+ ,4.8
+ ,7.2
+ ,5.7
+ ,4.7
+ ,7.0
+ ,5.5
+ ,4.6
+ ,6.7
+ ,5.3
+ ,4.5
+ ,6.4
+ ,5.2
+ ,4.5
+ ,6.1
+ ,5.3
+ ,4.8
+ ,6.1
+ ,5.3
+ ,4.8
+ ,5.9
+ ,5.0
+ ,4.6
+ ,5.6
+ ,4.8
+ ,4.3
+ ,5.5
+ ,4.9
+ ,4.3
+ ,5.7
+ ,5.3
+ ,4.6
+ ,6.1
+ ,6.0
+ ,5.4
+ ,6.8
+ ,6.2
+ ,5.5
+ ,7.1
+ ,6.4
+ ,5.5
+ ,7.5
+ ,6.4
+ ,5.3
+ ,7.8
+ ,6.4
+ ,5.2
+ ,7.9
+ ,6.2
+ ,5.2
+ ,7.6
+ ,6.1
+ ,5.4
+ ,7.0
+ ,6.0
+ ,5.3
+ ,6.9
+ ,5.9
+ ,5.0
+ ,7.1
+ ,6.2
+ ,4.9
+ ,7.9
+ ,6.2
+ ,4.9
+ ,8.0
+ ,6.4
+ ,5.3
+ ,7.9
+ ,6.8
+ ,6.3
+ ,7.4
+ ,6.9
+ ,6.7
+ ,7.2
+ ,7.0
+ ,6.7
+ ,7.3
+ ,7.0
+ ,6.4
+ ,7.7
+ ,6.9
+ ,6.1
+ ,7.8
+ ,6.7
+ ,6.0
+ ,7.6
+ ,6.6
+ ,6.2
+ ,7.3
+ ,6.5
+ ,6.1
+ ,7.0
+ ,6.4
+ ,6.0
+ ,6.9
+ ,6.5
+ ,6.0
+ ,7.2
+ ,6.5
+ ,5.9
+ ,7.3
+ ,6.6
+ ,5.9
+ ,7.5
+ ,6.7
+ ,6.0
+ ,7.5
+ ,6.8
+ ,6.1
+ ,7.7
+ ,7.2
+ ,6.4
+ ,8.2
+ ,7.6
+ ,6.7
+ ,8.8
+ ,7.6
+ ,6.7
+ ,8.7
+ ,7.3
+ ,6.5
+ ,8.3
+ ,6.4
+ ,5.9
+ ,7.1
+ ,6.1
+ ,5.6
+ ,6.8
+ ,6.3
+ ,5.7
+ ,7.2
+ ,7.1
+ ,6.0
+ ,8.5
+ ,7.5
+ ,6.3
+ ,9.1
+ ,7.4
+ ,6.3
+ ,8.9
+ ,7.1
+ ,6.2
+ ,8.2
+ ,6.8
+ ,6.1
+ ,7.6
+ ,6.9
+ ,6.3
+ ,7.7
+ ,7.2
+ ,6.5
+ ,8.1
+ ,7.4
+ ,6.6
+ ,8.3
+ ,7.3
+ ,6.5
+ ,8.3
+ ,6.9
+ ,6.2
+ ,7.9
+ ,6.9
+ ,6.2
+ ,7.8
+ ,6.8
+ ,5.9
+ ,8.0
+ ,7.1
+ ,6.1
+ ,8.5
+ ,7.2
+ ,6.1
+ ,8.6
+ ,7.1
+ ,6.1
+ ,8.5
+ ,7.0
+ ,6.1
+ ,8.1
+ ,6.9
+ ,6.1
+ ,7.8
+ ,7.0
+ ,6.3
+ ,7.9
+ ,7.4
+ ,6.7
+ ,8.2
+ ,7.5
+ ,6.9
+ ,8.3
+ ,7.5
+ ,6.9
+ ,8.2
+ ,7.4
+ ,6.9
+ ,8.1
+ ,7.3
+ ,6.8
+ ,8.0
+ ,7.0
+ ,6.4
+ ,7.8
+ ,6.7
+ ,5.9
+ ,7.8
+ ,6.5
+ ,5.5
+ ,7.7
+ ,6.5
+ ,5.6
+ ,7.7
+ ,6.5
+ ,5.6
+ ,7.6
+ ,6.6
+ ,5.8
+ ,7.6
+ ,6.8
+ ,5.9
+ ,7.8
+ ,6.9
+ ,6.1
+ ,8.0
+ ,6.9
+ ,6.1
+ ,8.0
+ ,6.8
+ ,6.0
+ ,7.9
+ ,6.8
+ ,6.0
+ ,7.7
+ ,6.5
+ ,5.8
+ ,7.4
+ ,6.1
+ ,5.5
+ ,6.9
+ ,6.0
+ ,5.5
+ ,6.7
+ ,5.9
+ ,5.4
+ ,6.5
+ ,5.8
+ ,5.2
+ ,6.4
+ ,5.9
+ ,5.2
+ ,6.6
+ ,5.9
+ ,5.2
+ ,6.8
+ ,6.2
+ ,5.5
+ ,7.0
+ ,6.3
+ ,5.7
+ ,6.9
+ ,6.2
+ ,5.7
+ ,6.7
+ ,6.0
+ ,5.6
+ ,6.4
+ ,5.8
+ ,5.4
+ ,6.2
+ ,5.5
+ ,5.1
+ ,5.9
+ ,5.5
+ ,5.1
+ ,6.0
+ ,5.7
+ ,5.3
+ ,6.3
+ ,5.8
+ ,5.3
+ ,6.3
+ ,5.7
+ ,5.3
+ ,6.1)
+ ,dim=c(3
+ ,96)
+ ,dimnames=list(c('Total'
+ ,'Men>25'
+ ,'women>25')
+ ,1:96))
>  y <- array(NA,dim=c(3,96),dimnames=list(c('Total','Men>25','women>25'),1:96))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 96 members at h = 50.7]
  |--[dendrogram w/ 2 branches and 43 members at h = 10.8]
  |  |--[dendrogram w/ 2 branches and 25 members at h = 2.37]
  |  |  |--[dendrogram w/ 2 branches and 16 members at h = 1.25]
  |  |  |  |--[dendrogram w/ 2 branches and 8 members at h = 0.547]
  |  |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 0.176]
  |  |  |  |  |  |--leaf "51" 
  |  |  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |  |  |  |  |     |--leaf "28" 
  |  |  |  |  |     `--leaf "69" 
  |  |  |  |  `--[dendrogram w/ 2 branches and 5 members at h = 0.279]
  |  |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |  |  |     |  |--leaf "29" 
  |  |  |  |     |  `--leaf "62" 
  |  |  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 0.176]
  |  |  |  |        |--leaf "63" 
  |  |  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |  |  |  |           |--leaf "55" 
  |  |  |  |           `--leaf "56" 
  |  |  |  `--[dendrogram w/ 2 branches and 8 members at h = 0.923]
  |  |  |     |--[dendrogram w/ 2 branches and 4 members at h = 0.248]
  |  |  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |  |  |     |  |  |--leaf "70" 
  |  |  |     |  |  `--leaf "75" 
  |  |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 0.141]
  |  |  |     |     |--leaf "57" 
  |  |  |     |     `--leaf "78" 
  |  |  |     `--[dendrogram w/ 2 branches and 4 members at h = 0.355]
  |  |  |        |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |  |        |  |--leaf "76" 
  |  |  |        |  `--leaf "77" 
  |  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 0.173]
  |  |  |           |--leaf "49" 
  |  |  |           `--leaf "61" 
  |  |  `--[dendrogram w/ 2 branches and 9 members at h = 1.77]
  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0.141]
  |  |     |  |--leaf "26" 
  |  |     |  `--leaf "27" 
  |  |     `--[dendrogram w/ 2 branches and 7 members at h = 0.726]
  |  |        |--[dendrogram w/ 2 branches and 2 members at h = 0.245]
  |  |        |  |--leaf "25" 
  |  |        |  `--leaf "31" 
  |  |        `--[dendrogram w/ 2 branches and 5 members at h = 0.288]
  |  |           |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |  |           |  |--leaf "30" 
  |  |           |  `--leaf "37" 
  |  |           `--[dendrogram w/ 2 branches and 3 members at h = 0.128]
  |  |              |--leaf "50" 
  |  |              `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |  |                 |--leaf "38" 
  |  |                 `--leaf "79" 
  |  `--[dendrogram w/ 2 branches and 18 members at h = 3.39]
  |     |--[dendrogram w/ 2 branches and 10 members at h = 1.17]
  |     |  |--[dendrogram w/ 2 branches and 4 members at h = 0.383]
  |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |     |  |  |  |--leaf "65" 
  |     |  |  |  `--leaf "66" 
  |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 0.173]
  |     |  |     |--leaf "67" 
  |     |  |     `--leaf "68" 
  |     |  `--[dendrogram w/ 2 branches and 6 members at h = 0.438]
  |     |     |--[dendrogram w/ 2 branches and 2 members at h = 0.141]
  |     |     |  |--leaf "39" 
  |     |     |  `--leaf "52" 
  |     |     `--[dendrogram w/ 2 branches and 4 members at h = 0.316]
  |     |        |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |     |        |  |--leaf "42" 
  |     |        |  `--leaf "54" 
  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 0.141]
  |     |           |--leaf "53" 
  |     |           `--leaf "64" 
  |     `--[dendrogram w/ 2 branches and 8 members at h = 2.13]
  |        |--[dendrogram w/ 2 branches and 4 members at h = 0.195]
  |        |  |--leaf "59" 
  |        |  `--[dendrogram w/ 2 branches and 3 members at h = 0.133]
  |        |     |--leaf "46" 
  |        |     `--[dendrogram w/ 2 branches and 2 members at h = 0]
  |        |        |--leaf "58" 
  |        |        `--leaf "60" 
  |        `--[dendrogram w/ 2 branches and 4 members at h = 0.854]
  |           |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
  |           |  |--leaf "40" 
  |           |  `--leaf "41" 
  |           `--[dendrogram w/ 2 branches and 2 members at h = 0.224]
  |              |--leaf "47" 
  |              `--leaf "48" 
  `--[dendrogram w/ 2 branches and 53 members at h = 19.6]
     |--[dendrogram w/ 2 branches and 16 members at h = 4.33]
     |  |--[dendrogram w/ 2 branches and 7 members at h = 1.03]
     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
     |  |  |  |--leaf "92" 
     |  |  |  `--leaf "93" 
     |  |  `--[dendrogram w/ 2 branches and 5 members at h = 0.327]
     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0.173]
     |  |     |  |--leaf "91" 
     |  |     |  `--leaf "96" 
     |  |     `--[dendrogram w/ 2 branches and 3 members at h = 0.176]
     |  |        |--leaf "84" 
     |  |        `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
     |  |           |--leaf "94" 
     |  |           `--leaf "95" 
     |  `--[dendrogram w/ 2 branches and 9 members at h = 2.15]
     |     |--[dendrogram w/ 2 branches and 3 members at h = 0.396]
     |     |  |--leaf "9" 
     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 0.224]
     |     |     |--leaf "10" 
     |     |     `--leaf "11" 
     |     `--[dendrogram w/ 2 branches and 6 members at h = 0.986]
     |        |--[dendrogram w/ 2 branches and 2 members at h = 0.374]
     |        |  |--leaf "4" 
     |        |  `--leaf "5" 
     |        `--[dendrogram w/ 2 branches and 4 members at h = 0.416]
     |           |--[dendrogram w/ 2 branches and 2 members at h = 0.141]
     |           |  |--leaf "6" 
     |           |  `--leaf "12" 
     |           `--[dendrogram w/ 2 branches and 2 members at h = 0.2]
     |              |--leaf "7" 
     |              `--leaf "8" 
     `--[dendrogram w/ 2 branches and 37 members at h = 6.68]
        |--[dendrogram w/ 2 branches and 14 members at h = 1.40]
        |  |--[dendrogram w/ 2 branches and 7 members at h = 0.629]
        |  |  |--[dendrogram w/ 2 branches and 4 members at h = 0.219]
        |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
        |  |  |  |  |--leaf "14" 
        |  |  |  |  `--leaf "87" 
        |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 0.141]
        |  |  |     |--leaf "19" 
        |  |  |     `--leaf "81" 
        |  |  `--[dendrogram w/ 2 branches and 3 members at h = 0.255]
        |  |     |--leaf "88" 
        |  |     `--[dendrogram w/ 2 branches and 2 members at h = 0.173]
        |  |        |--leaf "44" 
        |  |        `--leaf "89" 
        |  `--[dendrogram w/ 2 branches and 7 members at h = 0.635]
        |     |--[dendrogram w/ 2 branches and 4 members at h = 0.332]
        |     |  |--[dendrogram w/ 2 branches and 2 members at h = 0.141]
        |     |  |  |--leaf "13" 
        |     |  |  `--leaf "82" 
        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 0.173]
        |     |     |--leaf "20" 
        |     |     `--leaf "86" 
        |     `--[dendrogram w/ 2 branches and 3 members at h = 0.394]
        |        |--leaf "90" 
        |        `--[dendrogram w/ 2 branches and 2 members at h = 0.224]
        |           |--leaf "83" 
        |           `--leaf "85" 
        `--[dendrogram w/ 2 branches and 23 members at h = 6]
           |--[dendrogram w/ 2 branches and 13 members at h = 2.13]
           |  |--[dendrogram w/ 2 branches and 6 members at h = 0.55]
           |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0.173]
           |  |  |  |--leaf "32" 
           |  |  |  `--leaf "33" 
           |  |  `--[dendrogram w/ 2 branches and 4 members at h = 0.363]
           |  |     |--leaf "45" 
           |  |     `--[dendrogram w/ 2 branches and 3 members at h = 0.217]
           |  |        |--leaf "43" 
           |  |        `--[dendrogram w/ 2 branches and 2 members at h = 0.141]
           |  |           |--leaf "34" 
           |  |           `--leaf "35" 
           |  `--[dendrogram w/ 2 branches and 7 members at h = 0.78]
           |     |--[dendrogram w/ 2 branches and 3 members at h = 0.217]
           |     |  |--leaf "80" 
           |     |  `--[dendrogram w/ 2 branches and 2 members at h = 0.141]
           |     |     |--leaf "36" 
           |     |     `--leaf "74" 
           |     `--[dendrogram w/ 2 branches and 4 members at h = 0.264]
           |        |--leaf "15" 
           |        `--[dendrogram w/ 2 branches and 3 members at h = 0.128]
           |           |--leaf "73" 
           |           `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
           |              |--leaf "71" 
           |              `--leaf "72" 
           `--[dendrogram w/ 2 branches and 10 members at h = 3.41]
              |--[dendrogram w/ 2 branches and 4 members at h = 0.380]
              |  |--leaf "21" 
              |  `--[dendrogram w/ 2 branches and 3 members at h = 0.327]
              |     |--leaf "3" 
              |     `--[dendrogram w/ 2 branches and 2 members at h = 0.141]
              |        |--leaf "1" 
              |        `--leaf "2" 
              `--[dendrogram w/ 2 branches and 6 members at h = 0.875]
                 |--[dendrogram w/ 2 branches and 2 members at h = 0.1]
                 |  |--leaf "22" 
                 |  `--leaf "23" 
                 `--[dendrogram w/ 2 branches and 4 members at h = 0.46]
                    |--leaf "18" 
                    `--[dendrogram w/ 2 branches and 3 members at h = 0.128]
                       |--leaf "16" 
                       `--[dendrogram w/ 2 branches and 2 members at h = 0.1]
                          |--leaf "17" 
                          `--leaf "24" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/1jb5y1226486715.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/23oft1226486715.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/3hmxd1226486715.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4pdzu1226486715.tab") 
+ }
> 
> system("convert tmp/1jb5y1226486715.ps tmp/1jb5y1226486715.png")
> system("convert tmp/23oft1226486715.ps tmp/23oft1226486715.png")
convert: unable to open image `tmp/23oft1226486715.ps': No such file or directory.
convert: missing an image filename `tmp/23oft1226486715.png'.
> 
> 
> proc.time()
   user  system elapsed 
  1.012   0.224   1.350