R version 2.7.2 (2008-08-25)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> x <- array(list(3.253
+ ,11.836
+ ,345
+ ,6.06
+ ,519164
+ ,3.233
+ ,11.85
+ ,334
+ ,5.983
+ ,517009
+ ,3.196
+ ,11.897
+ ,345
+ ,6.11
+ ,509933
+ ,3.138
+ ,12.082
+ ,333
+ ,6.143
+ ,509127
+ ,3.091
+ ,11.936
+ ,336
+ ,6.093
+ ,500857
+ ,3.17
+ ,11.928
+ ,324
+ ,6.148
+ ,506971
+ ,3.378
+ ,12.646
+ ,320
+ ,6.464
+ ,569323
+ ,3.468
+ ,12.747
+ ,330
+ ,6.532
+ ,579714
+ ,3.33
+ ,12.447
+ ,313
+ ,6.321
+ ,577992
+ ,3.413
+ ,12.445
+ ,301
+ ,6.23
+ ,565464
+ ,3.356
+ ,12.257
+ ,288
+ ,6.176
+ ,547344
+ ,3.525
+ ,12.878
+ ,294
+ ,6.338
+ ,554788
+ ,3.633
+ ,13.69
+ ,302
+ ,6.462
+ ,562325
+ ,3.597
+ ,13.665
+ ,294
+ ,6.401
+ ,560854
+ ,3.6
+ ,13.78
+ ,293
+ ,6.46
+ ,555332
+ ,3.522
+ ,13.608
+ ,290
+ ,6.519
+ ,543599
+ ,3.503
+ ,13.375
+ ,283
+ ,6.542
+ ,536662
+ ,3.532
+ ,13.376
+ ,286
+ ,6.637
+ ,542722
+ ,3.686
+ ,13.918
+ ,293
+ ,7.114
+ ,593530
+ ,3.748
+ ,14.304
+ ,334
+ ,7.579
+ ,610763
+ ,3.672
+ ,13.877
+ ,329
+ ,7.408
+ ,612613
+ ,3.843
+ ,14.543
+ ,411
+ ,8.243
+ ,611324
+ ,3.905
+ ,14.291
+ ,416
+ ,8.243
+ ,594167
+ ,3.999
+ ,14.788
+ ,418
+ ,8.434
+ ,595454
+ ,4.07
+ ,15.241
+ ,408
+ ,8.576
+ ,590865
+ ,4.084
+ ,15.265
+ ,402
+ ,8.58
+ ,589379
+ ,4.042
+ ,15.322
+ ,401
+ ,8.645
+ ,584428
+ ,3.951
+ ,15.175
+ ,400
+ ,8.66
+ ,573100
+ ,3.933
+ ,14.817
+ ,389
+ ,8.72
+ ,567456
+ ,3.958
+ ,14.579
+ ,371
+ ,8.787
+ ,569028
+ ,4.147
+ ,15.247
+ ,364
+ ,9.162
+ ,620735
+ ,4.221
+ ,15.385
+ ,350
+ ,9.144
+ ,628884
+ ,4.058
+ ,14.891
+ ,332
+ ,8.806
+ ,628232
+ ,4.057
+ ,14.766
+ ,323
+ ,8.778
+ ,612117
+ ,4.089
+ ,14.42
+ ,316
+ ,8.66
+ ,595404
+ ,4.268
+ ,14.85
+ ,312
+ ,8.826
+ ,597141
+ ,4.309
+ ,15.117
+ ,315
+ ,8.609
+ ,593408
+ ,4.303
+ ,15.352
+ ,314
+ ,8.628
+ ,590072
+ ,4.177
+ ,15.099
+ ,313
+ ,8.619
+ ,579799
+ ,4.117
+ ,15.291
+ ,314
+ ,8.775
+ ,574205
+ ,4.065
+ ,15.208
+ ,317
+ ,8.84
+ ,572775
+ ,3.983
+ ,14.995
+ ,308
+ ,8.745
+ ,572942
+ ,4.091
+ ,15.454
+ ,312
+ ,9.092
+ ,619567
+ ,4.067
+ ,15.251
+ ,306
+ ,8.934
+ ,625809
+ ,4.024
+ ,14.975
+ ,304
+ ,8.749
+ ,619916
+ ,3.868
+ ,14.005
+ ,297
+ ,8.298
+ ,587625
+ ,3.8
+ ,13.55
+ ,284
+ ,8.067
+ ,565742
+ ,3.804
+ ,13.422
+ ,278
+ ,7.969
+ ,557274
+ ,3.862
+ ,13.848
+ ,273
+ ,7.999
+ ,560576
+ ,3.792
+ ,13.376
+ ,265
+ ,7.865
+ ,548854
+ ,3.674
+ ,13.038
+ ,259
+ ,7.746
+ ,531673
+ ,3.56
+ ,12.974
+ ,252
+ ,7.633
+ ,525919
+ ,3.489
+ ,12.554
+ ,245
+ ,7.458
+ ,511038
+ ,3.412
+ ,11.971
+ ,235
+ ,7.391
+ ,498662
+ ,3.674
+ ,12.916
+ ,232
+ ,7.856
+ ,555362
+ ,3.672
+ ,12.757
+ ,229
+ ,7.72
+ ,564591
+ ,3.463
+ ,11.924
+ ,219
+ ,7.297
+ ,541657
+ ,3.429
+ ,11.693
+ ,218
+ ,7.123
+ ,527070
+ ,3.4
+ ,11.382
+ ,215
+ ,7.004
+ ,509846
+ ,3.533
+ ,11.821
+ ,211
+ ,7.151
+ ,514258)
+ ,dim=c(5
+ ,60)
+ ,dimnames=list(c('landbouw'
+ ,'voeding'
+ ,'tabak'
+ ,'textiel'
+ ,'totaal')
+ ,1:60))
>  y <- array(NA,dim=c(5,60),dimnames=list(c('landbouw','voeding','tabak','textiel','totaal'),1:60))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 60 members at h = 1071642]
  |--[dendrogram w/ 2 branches and 19 members at h = 197028]
  |  |--[dendrogram w/ 2 branches and 10 members at h = 30991]
  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2197]
  |  |  |  |--leaf "5" 
  |  |  |  `--leaf "54" 
  |  |  `--[dendrogram w/ 2 branches and 8 members at h = 21069]
  |  |     |--[dendrogram w/ 2 branches and 5 members at h = 4235]
  |  |     |  |--leaf "6" 
  |  |     |  `--[dendrogram w/ 2 branches and 4 members at h = 1826]
  |  |     |     |--leaf "53" 
  |  |     |     `--[dendrogram w/ 2 branches and 3 members at h = 971]
  |  |     |        |--leaf "4" 
  |  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 156]
  |  |     |           |--leaf "3" 
  |  |     |           `--leaf "59" 
  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 4389]
  |  |        |--leaf "60" 
  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 2155]
  |  |           |--leaf "1" 
  |  |           `--leaf "2" 
  |  `--[dendrogram w/ 2 branches and 9 members at h = 47470]
  |     |--[dendrogram w/ 2 branches and 5 members at h = 11113]
  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 1510]
  |     |  |  |--leaf "11" 
  |     |  |  `--leaf "50" 
  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 1715]
  |     |     |--leaf "57" 
  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 877]
  |     |        |--leaf "16" 
  |     |        `--leaf "18" 
  |     `--[dendrogram w/ 2 branches and 4 members at h = 12276]
  |        |--[dendrogram w/ 2 branches and 2 members at h = 1152]
  |        |  |--leaf "52" 
  |        |  `--leaf "58" 
  |        `--[dendrogram w/ 2 branches and 2 members at h = 4989]
  |           |--leaf "17" 
  |           `--leaf "51" 
  `--[dendrogram w/ 2 branches and 41 members at h = 516871]
     |--[dendrogram w/ 2 branches and 20 members at h = 83356]
     |  |--[dendrogram w/ 2 branches and 7 members at h = 16126]
     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 2054]
     |  |  |  |--leaf "13" 
     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 279]
     |  |  |     |--leaf "14" 
     |  |  |     `--leaf "49" 
     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 2972]
     |  |     |--leaf "48" 
     |  |     `--[dendrogram w/ 2 branches and 3 members at h = 725]
     |  |        |--leaf "12" 
     |  |        `--[dendrogram w/ 2 branches and 2 members at h = 68]
     |  |           |--leaf "15" 
     |  |           `--leaf "55" 
     |  `--[dendrogram w/ 2 branches and 13 members at h = 40319]
     |     |--[dendrogram w/ 2 branches and 6 members at h = 7999]
     |     |  |--[dendrogram w/ 2 branches and 3 members at h = 1259]
     |     |  |  |--leaf "56" 
     |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 279]
     |     |  |     |--leaf "10" 
     |     |  |     `--leaf "47" 
     |     |  `--[dendrogram w/ 2 branches and 3 members at h = 2194]
     |     |     |--leaf "29" 
     |     |     `--[dendrogram w/ 2 branches and 2 members at h = 299]
     |     |        |--leaf "7" 
     |     |        `--leaf "30" 
     |     `--[dendrogram w/ 2 branches and 7 members at h = 17934]
     |        |--[dendrogram w/ 2 branches and 4 members at h = 1786]
     |        |  |--leaf "40" 
     |        |  `--[dendrogram w/ 2 branches and 3 members at h = 290]
     |        |     |--leaf "28" 
     |        |     `--[dendrogram w/ 2 branches and 2 members at h = 167]
     |        |        |--leaf "41" 
     |        |        `--leaf "42" 
     |        `--[dendrogram w/ 2 branches and 3 members at h = 2324]
     |           |--leaf "9" 
     |           `--[dendrogram w/ 2 branches and 2 members at h = 86.7]
     |              |--leaf "8" 
     |              `--leaf "39" 
     `--[dendrogram w/ 2 branches and 21 members at h = 222619]
        |--[dendrogram w/ 2 branches and 11 members at h = 24191]
        |  |--[dendrogram w/ 2 branches and 6 members at h = 5205]
        |  |  |--[dendrogram w/ 2 branches and 3 members at h = 902]
        |  |  |  |--leaf "23" 
        |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 124]
        |  |  |     |--leaf "19" 
        |  |  |     `--leaf "37" 
        |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2247]
        |  |     |--leaf "36" 
        |  |     `--[dendrogram w/ 2 branches and 2 members at h = 114]
        |  |        |--leaf "24" 
        |  |        `--leaf "35" 
        |  `--[dendrogram w/ 2 branches and 5 members at h = 7077]
        |     |--[dendrogram w/ 2 branches and 3 members at h = 1290]
        |     |  |--leaf "25" 
        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 699]
        |     |     |--leaf "26" 
        |     |     `--leaf "38" 
        |     `--[dendrogram w/ 2 branches and 2 members at h = 3199]
        |        |--leaf "27" 
        |        `--leaf "46" 
        `--[dendrogram w/ 2 branches and 10 members at h = 46213]
           |--[dendrogram w/ 2 branches and 4 members at h = 2116]
           |  |--[dendrogram w/ 2 branches and 2 members at h = 496]
           |  |  |--leaf "21" 
           |  |  `--leaf "34" 
           |  `--[dendrogram w/ 2 branches and 2 members at h = 566]
           |     |--leaf "20" 
           |     `--leaf "22" 
           `--[dendrogram w/ 2 branches and 6 members at h = 19877]
              |--[dendrogram w/ 2 branches and 3 members at h = 1211]
              |  |--leaf "31" 
              |  `--[dendrogram w/ 2 branches and 2 members at h = 349]
              |     |--leaf "43" 
              |     `--leaf "45" 
              `--[dendrogram w/ 2 branches and 3 members at h = 3448]
                 |--leaf "44" 
                 `--[dendrogram w/ 2 branches and 2 members at h = 652]
                    |--leaf "32" 
                    `--leaf "33" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/1xz5a1226564636.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/297391226564636.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/3qyvi1226564637.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4ayzk1226564637.tab") 
+ }
> 
> system("convert tmp/1xz5a1226564636.ps tmp/1xz5a1226564636.png")
> system("convert tmp/297391226564636.ps tmp/297391226564636.png")
convert: unable to open image `tmp/297391226564636.ps': No such file or directory.
convert: missing an image filename `tmp/297391226564636.png'.
> 
> 
> proc.time()
   user  system elapsed 
  0.790   0.200   0.911