R version 2.7.2 (2008-08-25)
Copyright (C) 2008 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> x <- array(list(1846.5
+ ,1530.9
+ ,2225.4
+ ,1163.9
+ ,2796.3
+ ,2220.6
+ ,2713.9
+ ,1467.9
+ ,2895.6
+ ,2161.5
+ ,2923.3
+ ,1433.7
+ ,2472.2
+ ,1863.6
+ ,2707
+ ,1362.2
+ ,2584.4
+ ,1955.1
+ ,2473.9
+ ,1299
+ ,2630.4
+ ,1907.4
+ ,2521
+ ,1291.5
+ ,2663.1
+ ,1889.4
+ ,2531.8
+ ,1452.7
+ ,3176.2
+ ,2246.3
+ ,3068.8
+ ,1555.4
+ ,2856.7
+ ,2213
+ ,2826.9
+ ,1402.5
+ ,2551.4
+ ,1965
+ ,2674.2
+ ,1242.9
+ ,3088.7
+ ,2285.6
+ ,2966.6
+ ,1514.6
+ ,2628.3
+ ,1983.8
+ ,2798.8
+ ,1308.6
+ ,2226.2
+ ,1872.4
+ ,2629.6
+ ,1239.3
+ ,3023.6
+ ,2371.4
+ ,3124.6
+ ,1519.9
+ ,3077.9
+ ,2287
+ ,3115.7
+ ,1659.4
+ ,3084.1
+ ,2198.2
+ ,3083
+ ,1597.6
+ ,2990.3
+ ,2330.4
+ ,2863.9
+ ,1340.6
+ ,2949.6
+ ,2014.4
+ ,2728.7
+ ,1427.2
+ ,3014.7
+ ,2066.1
+ ,2789.4
+ ,1438.1
+ ,3517.7
+ ,2355.8
+ ,3225.7
+ ,1616.2
+ ,3121.2
+ ,2232.5
+ ,3148.2
+ ,1392.8
+ ,3067.4
+ ,2091.7
+ ,2836.5
+ ,1318.7
+ ,3174.6
+ ,2376.5
+ ,3153.5
+ ,1420.9
+ ,2676.3
+ ,1931.9
+ ,2656.9
+ ,1221
+ ,2424
+ ,2025.7
+ ,2834.7
+ ,1310
+ ,3195.1
+ ,2404.9
+ ,3172.5
+ ,1466.7
+ ,3146.6
+ ,2316.1
+ ,2998.8
+ ,1299.3
+ ,3506.7
+ ,2368.1
+ ,3103.1
+ ,1640
+ ,3528.5
+ ,2282.5
+ ,2735.6
+ ,1506.3
+ ,3365.1
+ ,2158.6
+ ,2818.1
+ ,1530.2
+ ,3153
+ ,2174.8
+ ,2874.4
+ ,1661.9
+ ,3843.3
+ ,2594.1
+ ,3438.5
+ ,1880.3
+ ,3123.2
+ ,2281.4
+ ,2949.1
+ ,1230.8
+ ,3361.1
+ ,2547.9
+ ,3306.8
+ ,1406.5
+ ,3481.9
+ ,2606.3
+ ,3530
+ ,1523.5
+ ,2970.5
+ ,2190.8
+ ,3003.8
+ ,1323.2
+ ,2537
+ ,2262.3
+ ,3206.4
+ ,1319.2
+ ,3257.6
+ ,2423.8
+ ,3514.6
+ ,1500.7
+ ,3301.3
+ ,2520.4
+ ,3522.6
+ ,1483
+ ,3391.6
+ ,2482.9
+ ,3525.5
+ ,1497
+ ,2933.6
+ ,2215.9
+ ,2996.2
+ ,1219.8
+ ,3283.2
+ ,2441.9
+ ,3231.1
+ ,1472.9
+ ,3139.7
+ ,2333.8
+ ,3030
+ ,1423.9
+ ,3486.4
+ ,2670.2
+ ,3541.7
+ ,1629.6
+ ,3202.2
+ ,2431
+ ,3113.2
+ ,1353.4
+ ,3294.4
+ ,2559.3
+ ,3390.8
+ ,1366.8
+ ,3550.3
+ ,2661.4
+ ,3424.2
+ ,1527.1
+ ,3279.3
+ ,2404.6
+ ,3079.8
+ ,1487.6
+ ,2678.6
+ ,2378.3
+ ,3123.4
+ ,1478.6
+ ,3451.4
+ ,2489.2
+ ,3317.1
+ ,1536.7
+ ,3977.1
+ ,2959
+ ,3611.6
+ ,1682.1
+ ,3814.8
+ ,2713.5
+ ,3341.1
+ ,1576.5
+ ,3310.5
+ ,2341.3
+ ,2684.9
+ ,1280.5
+ ,3971.8
+ ,2833.2
+ ,3747.8
+ ,1756.5
+ ,4051.9
+ ,2849.7
+ ,3677.8
+ ,1698.8
+ ,4057.6
+ ,2871.7
+ ,3787.8
+ ,1709.3
+ ,4391.4
+ ,3058.3
+ ,4171.2
+ ,1741
+ ,3628.9
+ ,2855.1
+ ,3774
+ ,1493
+ ,4092.2
+ ,3083.6
+ ,4053.7
+ ,1577.5
+ ,3822.5
+ ,2828.3
+ ,4000.9
+ ,1609.3)
+ ,dim=c(4
+ ,60)
+ ,dimnames=list(c('Frankrijk'
+ ,'Nederland'
+ ,'Duitsland'
+ ,'UK')
+ ,1:60))
>  y <- array(NA,dim=c(4,60),dimnames=list(c('Frankrijk','Nederland','Duitsland','UK'),1:60))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases'
> main = 'Dendrogram'
> #'GNU S' R Code compiled by R2WASP v. 1.0.44 ()
> #Author: Prof. Dr. P. Wessa
> #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #Technical description: Write here your technical program description (don't use hard returns!)
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == 'TRUE'){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> x <- t(y)
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 60 members at h = 17000]
  |--[dendrogram w/ 2 branches and 19 members at h = 4416]
  |  |--[dendrogram w/ 2 branches and 9 members at h = 621]
  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 163]
  |  |  |  |--leaf "47" 
  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 124]
  |  |  |     |--leaf "35" 
  |  |  |     `--leaf "44" 
  |  |  `--[dendrogram w/ 2 branches and 6 members at h = 426]
  |  |     |--[dendrogram w/ 2 branches and 3 members at h = 137]
  |  |     |  |--leaf "38" 
  |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 98.8]
  |  |     |     |--leaf "39" 
  |  |     |     `--leaf "40" 
  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 243]
  |  |        |--leaf "50" 
  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 115]
  |  |           |--leaf "34" 
  |  |           `--leaf "46" 
  |  `--[dendrogram w/ 2 branches and 10 members at h = 1287]
  |     |--[dendrogram w/ 2 branches and 2 members at h = 362]
  |     |  |--leaf "57" 
  |     |  `--leaf "59" 
  |     `--[dendrogram w/ 2 branches and 8 members at h = 916]
  |        |--[dendrogram w/ 2 branches and 2 members at h = 342]
  |        |  |--leaf "32" 
  |        |  `--leaf "52" 
  |        `--[dendrogram w/ 2 branches and 6 members at h = 751]
  |           |--[dendrogram w/ 2 branches and 4 members at h = 224]
  |           |  |--leaf "51" 
  |           |  `--[dendrogram w/ 2 branches and 3 members at h = 119]
  |           |     |--leaf "55" 
  |           |     `--[dendrogram w/ 2 branches and 2 members at h = 113]
  |           |        |--leaf "54" 
  |           |        `--leaf "56" 
  |           `--[dendrogram w/ 2 branches and 2 members at h = 321]
  |              |--leaf "58" 
  |              `--leaf "60" 
  `--[dendrogram w/ 2 branches and 41 members at h = 7697]
     |--[dendrogram w/ 2 branches and 10 members at h = 1451]
     |  |--leaf "1" 
     |  `--[dendrogram w/ 2 branches and 9 members at h = 613]
     |     |--[dendrogram w/ 2 branches and 3 members at h = 212]
     |     |  |--leaf "7" 
     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 81.6]
     |     |     |--leaf "5" 
     |     |     `--leaf "6" 
     |     `--[dendrogram w/ 2 branches and 6 members at h = 481]
     |        |--leaf "13" 
     |        `--[dendrogram w/ 2 branches and 5 members at h = 316]
     |           |--[dendrogram w/ 2 branches and 3 members at h = 184]
     |           |  |--leaf "12" 
     |           |  `--[dendrogram w/ 2 branches and 2 members at h = 132]
     |           |     |--leaf "10" 
     |           |     `--leaf "24" 
     |           `--[dendrogram w/ 2 branches and 2 members at h = 218]
     |              |--leaf "4" 
     |              `--leaf "25" 
     `--[dendrogram w/ 2 branches and 31 members at h = 2644]
        |--[dendrogram w/ 2 branches and 13 members at h = 1168]
        |  |--[dendrogram w/ 2 branches and 2 members at h = 257]
        |  |  |--leaf "37" 
        |  |  `--leaf "49" 
        |  `--[dendrogram w/ 2 branches and 11 members at h = 835]
        |     |--[dendrogram w/ 2 branches and 5 members at h = 318]
        |     |  |--[dendrogram w/ 2 branches and 2 members at h = 113]
        |     |  |  |--leaf "36" 
        |     |  |  `--leaf "41" 
        |     |  `--[dendrogram w/ 2 branches and 3 members at h = 242]
        |     |     |--leaf "17" 
        |     |     `--[dendrogram w/ 2 branches and 2 members at h = 94.4]
        |     |        |--leaf "27" 
        |     |        `--leaf "33" 
        |     `--[dendrogram w/ 2 branches and 6 members at h = 449]
        |        |--[dendrogram w/ 2 branches and 3 members at h = 198]
        |        |  |--leaf "22" 
        |        |  `--[dendrogram w/ 2 branches and 2 members at h = 104]
        |        |     |--leaf "18" 
        |        |     `--leaf "19" 
        |        `--[dendrogram w/ 2 branches and 3 members at h = 217]
        |           |--leaf "2" 
        |           `--[dendrogram w/ 2 branches and 2 members at h = 120]
        |              |--leaf "3" 
        |              `--leaf "9" 
        `--[dendrogram w/ 2 branches and 18 members at h = 1306]
           |--[dendrogram w/ 2 branches and 3 members at h = 369]
           |  |--leaf "53" 
           |  `--[dendrogram w/ 2 branches and 2 members at h = 222]
           |     |--leaf "29" 
           |     `--leaf "30" 
           `--[dendrogram w/ 2 branches and 15 members at h = 1012]
              |--[dendrogram w/ 2 branches and 8 members at h = 383]
              |  |--[dendrogram w/ 2 branches and 4 members at h = 216]
              |  |  |--leaf "21" 
              |  |  `--[dendrogram w/ 2 branches and 3 members at h = 205]
              |  |     |--leaf "14" 
              |  |     `--[dendrogram w/ 2 branches and 2 members at h = 131]
              |  |        |--leaf "11" 
              |  |        `--leaf "43" 
              |  `--[dendrogram w/ 2 branches and 4 members at h = 307]
              |     |--leaf "31" 
              |     `--[dendrogram w/ 2 branches and 3 members at h = 142]
              |        |--leaf "15" 
              |        `--[dendrogram w/ 2 branches and 2 members at h = 113]
              |           |--leaf "8" 
              |           `--leaf "16" 
              `--[dendrogram w/ 2 branches and 7 members at h = 780]
                 |--[dendrogram w/ 2 branches and 2 members at h = 126]
                 |  |--leaf "20" 
                 |  `--leaf "28" 
                 `--[dendrogram w/ 2 branches and 5 members at h = 185]
                    |--[dendrogram w/ 2 branches and 3 members at h = 133]
                    |  |--leaf "45" 
                    |  `--[dendrogram w/ 2 branches and 2 members at h = 60.7]
                    |     |--leaf "23" 
                    |     `--leaf "26" 
                    `--[dendrogram w/ 2 branches and 2 members at h = 157]
                       |--leaf "42" 
                       `--leaf "48" 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/www/html/rcomp/tmp/1tnfk1226570997.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == 'TRUE'){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == 'TRUE'){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/www/html/rcomp/tmp/21lqt1226570997.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == 'TRUE'){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/www/html/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/www/html/rcomp/tmp/3o8x11226570997.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/www/html/rcomp/tmp/4phd41226570998.tab") 
+ }
> 
> system("convert tmp/1tnfk1226570997.ps tmp/1tnfk1226570997.png")
> system("convert tmp/21lqt1226570997.ps tmp/21lqt1226570997.png")
convert: unable to open image `tmp/21lqt1226570997.ps': No such file or directory.
convert: missing an image filename `tmp/21lqt1226570997.png'.
> 
> 
> proc.time()
   user  system elapsed 
  0.803   0.197   1.320