R version 2.9.0 (2009-04-17) Copyright (C) 2009 The R Foundation for Statistical Computing ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- array(list(24,33,49,24,23,34,48,22,24,36,49,25,24,36,48,24,27,38,47,29,28,42,42,26,25,35,42,26,19,25,54,21,19,24,53,23,19,22,52,22,20,27,48,21,16,17,47,16,22,30,45,19,21,30,47,16,25,34,43,25,29,37,34,27,28,36,34,23,25,33,41,22,26,33,35,23,24,33,38,20,28,37,34,24,28,40,35,23,28,35,26,20,28,37,27,21,32,43,21,22,31,42,22,17,22,33,49,21,29,39,29,19,31,40,24,23,29,37,25,22,32,44,17,15,32,42,22,23,31,43,22,21,29,40,24,18,28,30,19,18,28,30,18,18,29,31,14,18,22,18,17,10,26,24,13,13,24,22,15,10,27,26,10,9,27,28,8,9,23,23,16,6,21,17,21,11,19,12,19,9,17,9,27,10,19,19,31,9,21,21,31,16,13,18,51,10,8,18,67,7,5,15,75,7,10,24,78,14,6,18,83,11,6,19,81,10,8,30,81,6,11,33,80,8,12,35,79,13,13,36,75,12,19,47,67,15,19,46,67,16,18,43,67,16),dim=c(4,61),dimnames=list(c('I.C.','E.S','W.B','S.'),1:61)) > y <- array(NA,dim=c(4,61),dimnames=list(c('I.C.','E.S','W.B','S.'),1:61)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > main = 'Kendall tau Correlation Plot' > #'GNU S' R Code compiled by R2WASP v. 1.0.44 () > #Author: Prof. Dr. P. Wessa > #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > #Technical description: Write here your technical program description (don't use hard returns!) > panel.tau <- function(x, y, digits=2, prefix='', cex.cor) + { + usr <- par('usr'); on.exit(par(usr)) + par(usr = c(0, 1, 0, 1)) + rr <- cor.test(x, y, method='kendall') + r <- round(rr$p.value,2) + txt <- format(c(r, 0.123456789), digits=digits)[1] + txt <- paste(prefix, txt, sep='') + if(missing(cex.cor)) cex <- 0.5/strwidth(txt) + text(0.5, 0.5, txt, cex = cex) + } > panel.hist <- function(x, ...) + { + usr <- par('usr'); on.exit(par(usr)) + par(usr = c(usr[1:2], 0, 1.5) ) + h <- hist(x, plot = FALSE) + breaks <- h$breaks; nB <- length(breaks) + y <- h$counts; y <- y/max(y) + rect(breaks[-nB], 0, breaks[-1], y, col='grey', ...) + } > postscript(file="/var/www/html/rcomp/tmp/1fbb61257938239.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > pairs(t(y),diag.panel=panel.hist, upper.panel=panel.smooth, lower.panel=panel.tau, main=main) > dev.off() null device 1 > > #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/www/html/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Kendall tau rank correlations for all pairs of data series',3,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'pair',1,TRUE) > a<-table.element(a,'tau',1,TRUE) > a<-table.element(a,'p-value',1,TRUE) > a<-table.row.end(a) > n <- length(y[,1]) > n [1] 4 > cor.test(y[1,],y[2,],method='kendall') Kendall's rank correlation tau data: y[1, ] and y[2, ] z = 5.5602, p-value = 2.694e-08 alternative hypothesis: true tau is not equal to 0 sample estimates: tau 0.5071492 > for (i in 1:(n-1)) + { + for (j in (i+1):n) + { + a<-table.row.start(a) + dum <- paste('tau(',dimnames(t(x))[[2]][i]) + dum <- paste(dum,',') + dum <- paste(dum,dimnames(t(x))[[2]][j]) + dum <- paste(dum,')') + a<-table.element(a,dum,header=TRUE) + r <- cor.test(y[i,],y[j,],method='kendall') + a<-table.element(a,r$estimate) + a<-table.element(a,r$p.value) + a<-table.row.end(a) + } + } > a<-table.end(a) > table.save(a,file="/var/www/html/rcomp/tmp/2y8yi1257938239.tab") > > system("convert tmp/1fbb61257938239.ps tmp/1fbb61257938239.png") > > > proc.time() user system elapsed 0.475 0.206 1.573