R version 2.8.1 (2008-12-22) Copyright (C) 2008 The R Foundation for Statistical Computing ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- array(list(31,45,22,20,26,44,22,16,18,45,20,10,26,45,21,12,26,45,20,10,27,42,21,12,22,43,21,12,24,50,21,13,31,46,19,17,23,46,21,12,31,45,21,15,37,49,22,12,42,46,19,14,43,45,24,19,48,49,22,16,46,47,22,17,45,45,22,16,52,48,24,19,46,51,22,17,53,48,23,17,47,49,24,20,43,51,21,18,44,54,20,16,48,52,22,19,48,52,23,18,51,53,23,23,57,51,22,20,50,55,20,20,38,53,21,15,31,51,21,17,31,52,20,16,37,54,20,15,26,58,17,10,36,57,18,13,41,52,19,10,44,50,19,19,50,53,20,21,49,50,21,17,48,50,20,16,50,51,21,17,52,53,19,14,53,49,22,18,59,54,20,17,53,57,18,14,59,58,16,15,61,56,17,16,62,60,18,11,54,55,19,15,62,54,18,13,63,52,20,17,63,55,21,16,71,56,18,9,65,54,19,17,65,53,19,15,61,59,19,12,59,62,21,12,53,63,19,12,55,64,19,12,39,75,17,4,36,77,16,7,29,79,16,4,31,77,17,3,30,82,16,3,23,83,15,0,19,81,16,5,14,78,16,3,3,79,16,4,6,79,18,3,13,73,19,10,3,72,16,4,6,67,16,1,0,67,16,1),dim=c(4,72),dimnames=list(c('E.S','P.T','E.S.G','SP'),1:72)) > y <- array(NA,dim=c(4,72),dimnames=list(c('E.S','P.T','E.S.G','SP'),1:72)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > main = 'Kendall tau Correlation Plot' > #'GNU S' R Code compiled by R2WASP v. 1.0.44 () > #Author: Prof. Dr. P. Wessa > #To cite this work: AUTHOR(S), (YEAR), YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > #Technical description: Write here your technical program description (don't use hard returns!) > panel.tau <- function(x, y, digits=2, prefix='', cex.cor) + { + usr <- par('usr'); on.exit(par(usr)) + par(usr = c(0, 1, 0, 1)) + rr <- cor.test(x, y, method='kendall') + r <- round(rr$p.value,2) + txt <- format(c(r, 0.123456789), digits=digits)[1] + txt <- paste(prefix, txt, sep='') + if(missing(cex.cor)) cex <- 0.5/strwidth(txt) + text(0.5, 0.5, txt, cex = cex) + } > panel.hist <- function(x, ...) + { + usr <- par('usr'); on.exit(par(usr)) + par(usr = c(usr[1:2], 0, 1.5) ) + h <- hist(x, plot = FALSE) + breaks <- h$breaks; nB <- length(breaks) + y <- h$counts; y <- y/max(y) + rect(breaks[-nB], 0, breaks[-1], y, col='grey', ...) + } > postscript(file="/var/www/rcomp/tmp/16u371257938280.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > pairs(t(y),diag.panel=panel.hist, upper.panel=panel.smooth, lower.panel=panel.tau, main=main) > dev.off() null device 1 > > #Note: the /var/www/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/www/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Kendall tau rank correlations for all pairs of data series',3,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'pair',1,TRUE) > a<-table.element(a,'tau',1,TRUE) > a<-table.element(a,'p-value',1,TRUE) > a<-table.row.end(a) > n <- length(y[,1]) > n [1] 4 > cor.test(y[1,],y[2,],method='kendall') Kendall's rank correlation tau data: y[1, ] and y[2, ] z = 0.463, p-value = 0.6434 alternative hypothesis: true tau is not equal to 0 sample estimates: tau 0.038215 > for (i in 1:(n-1)) + { + for (j in (i+1):n) + { + a<-table.row.start(a) + dum <- paste('tau(',dimnames(t(x))[[2]][i]) + dum <- paste(dum,',') + dum <- paste(dum,dimnames(t(x))[[2]][j]) + dum <- paste(dum,')') + a<-table.element(a,dum,header=TRUE) + r <- cor.test(y[i,],y[j,],method='kendall') + a<-table.element(a,r$estimate) + a<-table.element(a,r$p.value) + a<-table.row.end(a) + } + } > a<-table.end(a) > table.save(a,file="/var/www/rcomp/tmp/26vud1257938280.tab") > > system("convert tmp/16u371257938280.ps tmp/16u371257938280.png") > > > proc.time() user system elapsed 0.480 0.340 0.796