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Sleep in Mammals (Model 1)

*The author of this computation has been verified*
R Software Module: /rwasp_multipleregression.wasp (opens new window with default values)
Title produced by software: Multiple Regression
Date of computation: Thu, 18 Mar 2010 13:12:28 -0600
 
Cite this page as follows:
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv.htm/, Retrieved Thu, 18 Mar 2010 20:25:19 +0100
 
BibTeX entries for LaTeX users:
@Manual{KEY,
    author = {{YOUR NAME}},
    publisher = {Office for Research Development and Education},
    title = {Statistical Computations at FreeStatistics.org, URL http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv.htm/},
    year = {2010},
}
@Manual{R,
    title = {R: A Language and Environment for Statistical Computing},
    author = {{R Development Core Team}},
    organization = {R Foundation for Statistical Computing},
    address = {Vienna, Austria},
    year = {2010},
    note = {{ISBN} 3-900051-07-0},
    url = {http://www.R-project.org},
}
 
Original text written by user:
T. Allison, D. V. Cicchetti (1976), Sleep in Mammals: Ecological and Constitutional Correlates, Science, vol. 194
 
IsPrivate?
No (this computation is public)
 
User-defined keywords:
 
Dataseries X:
» Textbox « » Textfile « » CSV «
6.3 0 3 2.1 3.40602894496362 4 9.1 1.02325245963371 4 15.8 -1.69897000433602 1 5.2 2.20411998265592 4 10.9 0.51851393987789 1 8.3 1.71733758272386 1 11 -0.36653154442041 4 3.2 2.66745295288995 5 6.3 -1.09691001300806 1 6.6 -0.10237290870956 2 9.5 -0.69897000433602 2 3.3 1.44185217577329 5 11 -0.92081875395238 2 4.7 1.92941892571429 1 10.4 -1 3 7.4 0.01703333929878 4 2.1 2.71683772329952 5 17.9 -2 1 6.1 1.79239168949825 1 11.9 -1.69897000433602 3 13.8 0.23044892137827 1 14.3 0.54406804435028 1 15.2 -0.31875876262441 2 10 1 4 11.9 0.20951501454263 2 6.5 2.28330122870355 4 7.5 0.39794000867204 5 10.6 -0.55284196865778 3 7.4 0.62736585659273 1 8.4 0.83250891270624 2 5.7 -0.1249387366083 2 4.9 0.55630250076729 3 3.2 1.74429298312268 5 11 -0.045757490560675 2 4.9 0.30102999566398 3 13.2 -1 2 9.7 0.6222140229663 4 12.8 0.54406804435028 1
 
Output produced by software:

Enter (or paste) a matrix (table) containing all data (time) series. Every column represents a different variable and must be delimited by a space or Tab. Every row represents a period in time (or category) and must be delimited by hard returns. The easiest way to enter data is to copy and paste a block of spreadsheet cells. Please, do not use commas or spaces to seperate groups of digits!


Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time5 seconds
R Server'Gwilym Jenkins' @ 72.249.127.135


Multiple Linear Regression - Estimated Regression Equation
SWS[t] = + 11.6923070380679 -1.81283463836901logWb[t] -0.805866957739349D[t] + e[t]


Multiple Linear Regression - Ordinary Least Squares
VariableParameterS.D.T-STAT
H0: parameter = 0
2-tail p-value1-tail p-value
(Intercept)11.69230703806790.9392712.448300
logWb-1.812834638369010.370561-4.89212.1e-051e-05
D-0.8058669577393490.336075-2.39790.02180.0109


Multiple Linear Regression - Regression Statistics
Multiple R0.758888821534529
R-squared0.575912243450066
Adjusted R-squared0.552351812530625
F-TEST (value)24.4440454174739
F-TEST (DF numerator)2
F-TEST (DF denominator)36
p-value1.96880734715243e-07
Multiple Linear Regression - Residual Statistics
Residual Standard Deviation2.6550561611856
Sum Squared Residuals253.775635885786


Multiple Linear Regression - Actuals, Interpolation, and Residuals
Time or IndexActualsInterpolation
Forecast
Residuals
Prediction Error
16.39.27470616484984-2.97470616484984
22.12.29427195639296-0.194271956392962
39.16.61385170449022.48614829550980
415.813.96639175373881.83360824626119
55.24.473134155430520.726865844569485
610.99.94646004964070.953539950359305
78.37.77319102459380.526808975406202
8119.133300286890691.86669971310931
93.22.827321140152520.372678859847483
106.312.8749565470833-6.57495654708334
116.610.2661582775285-3.66615827752845
129.511.3476901576304-1.84769015763045
133.35.04913268172158-1.74913268172158
141111.7498652554138-0.749865255413841
154.77.38872261986893-2.68872261986893
1610.411.0875408032188-0.687540803218838
177.48.43796057962255-1.03796057962255
182.12.73779471774615-0.637794717746149
1917.914.51210935706653.38789064293345
206.17.63713034008134-1.53713034008134
2111.912.3546578382601-0.454657838260114
2213.810.46867429327923.33132570672078
2314.39.900134683900654.39986531609935
2415.210.65843004875834.54156995124165
25106.656004568741463.34399543125854
2611.99.70075704696792.19924295303209
276.54.329591649886152.17040835011385
287.56.941572817657590.558427182342413
2910.610.27691723517680.323082764823235
307.49.74912952456717-2.34912952456717
318.48.57137212888438-0.171372128884376
325.710.3070663919868-4.60706639198676
334.98.26622172204758-3.36622172204758
343.24.50085751010232-1.30085751010232
351110.16352388644240.836476113557592
364.98.72898856152209-3.82898856152209
3713.211.89340776095821.30659223904181
389.77.340868073798232.35913192620177
3912.89.900134683900652.89986531609935


Goldfeld-Quandt test for Heteroskedasticity
p-valuesAlternative Hypothesis
breakpoint indexgreater2-sidedless
60.4832784011554960.9665568023109930.516721598844504
70.3103762783513990.6207525567027980.689623721648601
80.2098384641653670.4196769283307350.790161535834633
90.1172386693498230.2344773386996450.882761330650177
100.6755192147846560.6489615704306880.324480785215344
110.7046081564191590.5907836871616830.295391843580841
120.628985505986740.7420289880265210.371014494013260
130.5737237288999770.8525525422000460.426276271100023
140.4808186729277080.9616373458554160.519181327072292
150.4532449017384680.9064898034769370.546755098261531
160.3602716002334840.7205432004669680.639728399766516
170.2800542372458380.5601084744916750.719945762754162
180.2069738372658310.4139476745316620.793026162734169
190.2986206528884920.5972413057769840.701379347111508
200.2558315540439630.5116631080879270.744168445956037
210.1820563680115160.3641127360230310.817943631988484
220.2221257117314060.4442514234628130.777874288268594
230.3347293812575990.6694587625151970.665270618742401
240.4997517294002780.9995034588005570.500248270599722
250.5363812346596830.9272375306806340.463618765340317
260.5103887735166050.979222452966790.489611226483395
270.4884302773486480.9768605546972950.511569722651352
280.3886925670338670.7773851340677340.611307432966133
290.2870767655951620.5741535311903240.712923234404838
300.2457997268217000.4915994536433990.7542002731783
310.1542562163897450.3085124327794890.845743783610255
320.2924046944430350.584809388886070.707595305556965
330.3323444524255080.6646889048510160.667655547574492


Meta Analysis of Goldfeld-Quandt test for Heteroskedasticity
Description# significant tests% significant testsOK/NOK
1% type I error level00OK
5% type I error level00OK
10% type I error level00OK
 
Charts produced by software:
http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/10o9jo1268939542.png (open in new window)
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http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/1proc1268939542.png (open in new window)
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http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/3bzy61268939542.png (open in new window)
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http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/4nzs21268939542.png (open in new window)
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http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/6880x1268939542.png (open in new window)
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http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/8s96s1268939542.png (open in new window)
http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/8s96s1268939542.ps (open in new window)


http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/9b1sy1268939542.png (open in new window)
http://www.freestatistics.org/blog/date/2010/Mar/18/t1268940308w34o755nwfys7gv/9b1sy1268939542.ps (open in new window)


 
Parameters (Session):
par1 = 1 ; par2 = Do not include Seasonal Dummies ; par3 = No Linear Trend ;
 
Parameters (R input):
par1 = 1 ; par2 = Do not include Seasonal Dummies ; par3 = No Linear Trend ;
 
R code (references can be found in the software module):
library(lattice)
library(lmtest)
n25 <- 25 #minimum number of obs. for Goldfeld-Quandt test
par1 <- as.numeric(par1)
x <- t(y)
k <- length(x[1,])
n <- length(x[,1])
x1 <- cbind(x[,par1], x[,1:k!=par1])
mycolnames <- c(colnames(x)[par1], colnames(x)[1:k!=par1])
colnames(x1) <- mycolnames #colnames(x)[par1]
x <- x1
if (par3 == 'First Differences'){
x2 <- array(0, dim=c(n-1,k), dimnames=list(1:(n-1), paste('(1-B)',colnames(x),sep='')))
for (i in 1:n-1) {
for (j in 1:k) {
x2[i,j] <- x[i+1,j] - x[i,j]
}
}
x <- x2
}
if (par2 == 'Include Monthly Dummies'){
x2 <- array(0, dim=c(n,11), dimnames=list(1:n, paste('M', seq(1:11), sep ='')))
for (i in 1:11){
x2[seq(i,n,12),i] <- 1
}
x <- cbind(x, x2)
}
if (par2 == 'Include Quarterly Dummies'){
x2 <- array(0, dim=c(n,3), dimnames=list(1:n, paste('Q', seq(1:3), sep ='')))
for (i in 1:3){
x2[seq(i,n,4),i] <- 1
}
x <- cbind(x, x2)
}
k <- length(x[1,])
if (par3 == 'Linear Trend'){
x <- cbind(x, c(1:n))
colnames(x)[k+1] <- 't'
}
x
k <- length(x[1,])
df <- as.data.frame(x)
(mylm <- lm(df))
(mysum <- summary(mylm))
if (n > n25) {
kp3 <- k + 3
nmkm3 <- n - k - 3
gqarr <- array(NA, dim=c(nmkm3-kp3+1,3))
numgqtests <- 0
numsignificant1 <- 0
numsignificant5 <- 0
numsignificant10 <- 0
for (mypoint in kp3:nmkm3) {
j <- 0
numgqtests <- numgqtests + 1
for (myalt in c('greater', 'two.sided', 'less')) {
j <- j + 1
gqarr[mypoint-kp3+1,j] <- gqtest(mylm, point=mypoint, alternative=myalt)$p.value
}
if (gqarr[mypoint-kp3+1,2] < 0.01) numsignificant1 <- numsignificant1 + 1
if (gqarr[mypoint-kp3+1,2] < 0.05) numsignificant5 <- numsignificant5 + 1
if (gqarr[mypoint-kp3+1,2] < 0.10) numsignificant10 <- numsignificant10 + 1
}
gqarr
}
bitmap(file='test0.png')
plot(x[,1], type='l', main='Actuals and Interpolation', ylab='value of Actuals and Interpolation (dots)', xlab='time or index')
points(x[,1]-mysum$resid)
grid()
dev.off()
bitmap(file='test1.png')
plot(mysum$resid, type='b', pch=19, main='Residuals', ylab='value of Residuals', xlab='time or index')
grid()
dev.off()
bitmap(file='test2.png')
hist(mysum$resid, main='Residual Histogram', xlab='values of Residuals')
grid()
dev.off()
bitmap(file='test3.png')
densityplot(~mysum$resid,col='black',main='Residual Density Plot', xlab='values of Residuals')
dev.off()
bitmap(file='test4.png')
qqnorm(mysum$resid, main='Residual Normal Q-Q Plot')
qqline(mysum$resid)
grid()
dev.off()
(myerror <- as.ts(mysum$resid))
bitmap(file='test5.png')
dum <- cbind(lag(myerror,k=1),myerror)
dum
dum1 <- dum[2:length(myerror),]
dum1
z <- as.data.frame(dum1)
z
plot(z,main=paste('Residual Lag plot, lowess, and regression line'), ylab='values of Residuals', xlab='lagged values of Residuals')
lines(lowess(z))
abline(lm(z))
grid()
dev.off()
bitmap(file='test6.png')
acf(mysum$resid, lag.max=length(mysum$resid)/2, main='Residual Autocorrelation Function')
grid()
dev.off()
bitmap(file='test7.png')
pacf(mysum$resid, lag.max=length(mysum$resid)/2, main='Residual Partial Autocorrelation Function')
grid()
dev.off()
bitmap(file='test8.png')
opar <- par(mfrow = c(2,2), oma = c(0, 0, 1.1, 0))
plot(mylm, las = 1, sub='Residual Diagnostics')
par(opar)
dev.off()
if (n > n25) {
bitmap(file='test9.png')
plot(kp3:nmkm3,gqarr[,2], main='Goldfeld-Quandt test',ylab='2-sided p-value',xlab='breakpoint')
grid()
dev.off()
}
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a, 'Multiple Linear Regression - Estimated Regression Equation', 1, TRUE)
a<-table.row.end(a)
myeq <- colnames(x)[1]
myeq <- paste(myeq, '[t] = ', sep='')
for (i in 1:k){
if (mysum$coefficients[i,1] > 0) myeq <- paste(myeq, '+', '')
myeq <- paste(myeq, mysum$coefficients[i,1], sep=' ')
if (rownames(mysum$coefficients)[i] != '(Intercept)') {
myeq <- paste(myeq, rownames(mysum$coefficients)[i], sep='')
if (rownames(mysum$coefficients)[i] != 't') myeq <- paste(myeq, '[t]', sep='')
}
}
myeq <- paste(myeq, ' + e[t]')
a<-table.row.start(a)
a<-table.element(a, myeq)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,hyperlink('http://www.xycoon.com/ols1.htm','Multiple Linear Regression - Ordinary Least Squares',''), 6, TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Variable',header=TRUE)
a<-table.element(a,'Parameter',header=TRUE)
a<-table.element(a,'S.D.',header=TRUE)
a<-table.element(a,'T-STAT<br />H0: parameter = 0',header=TRUE)
a<-table.element(a,'2-tail p-value',header=TRUE)
a<-table.element(a,'1-tail p-value',header=TRUE)
a<-table.row.end(a)
for (i in 1:k){
a<-table.row.start(a)
a<-table.element(a,rownames(mysum$coefficients)[i],header=TRUE)
a<-table.element(a,mysum$coefficients[i,1])
a<-table.element(a, round(mysum$coefficients[i,2],6))
a<-table.element(a, round(mysum$coefficients[i,3],4))
a<-table.element(a, round(mysum$coefficients[i,4],6))
a<-table.element(a, round(mysum$coefficients[i,4]/2,6))
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a, 'Multiple Linear Regression - Regression Statistics', 2, TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Multiple R',1,TRUE)
a<-table.element(a, sqrt(mysum$r.squared))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'R-squared',1,TRUE)
a<-table.element(a, mysum$r.squared)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Adjusted R-squared',1,TRUE)
a<-table.element(a, mysum$adj.r.squared)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'F-TEST (value)',1,TRUE)
a<-table.element(a, mysum$fstatistic[1])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'F-TEST (DF numerator)',1,TRUE)
a<-table.element(a, mysum$fstatistic[2])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'F-TEST (DF denominator)',1,TRUE)
a<-table.element(a, mysum$fstatistic[3])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'p-value',1,TRUE)
a<-table.element(a, 1-pf(mysum$fstatistic[1],mysum$fstatistic[2],mysum$fstatistic[3]))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Multiple Linear Regression - Residual Statistics', 2, TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Residual Standard Deviation',1,TRUE)
a<-table.element(a, mysum$sigma)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Sum Squared Residuals',1,TRUE)
a<-table.element(a, sum(myerror*myerror))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable3.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a, 'Multiple Linear Regression - Actuals, Interpolation, and Residuals', 4, TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Time or Index', 1, TRUE)
a<-table.element(a, 'Actuals', 1, TRUE)
a<-table.element(a, 'Interpolation<br />Forecast', 1, TRUE)
a<-table.element(a, 'Residuals<br />Prediction Error', 1, TRUE)
a<-table.row.end(a)
for (i in 1:n) {
a<-table.row.start(a)
a<-table.element(a,i, 1, TRUE)
a<-table.element(a,x[i])
a<-table.element(a,x[i]-mysum$resid[i])
a<-table.element(a,mysum$resid[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable4.tab')
if (n > n25) {
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Goldfeld-Quandt test for Heteroskedasticity',4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-values',header=TRUE)
a<-table.element(a,'Alternative Hypothesis',3,header=TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'breakpoint index',header=TRUE)
a<-table.element(a,'greater',header=TRUE)
a<-table.element(a,'2-sided',header=TRUE)
a<-table.element(a,'less',header=TRUE)
a<-table.row.end(a)
for (mypoint in kp3:nmkm3) {
a<-table.row.start(a)
a<-table.element(a,mypoint,header=TRUE)
a<-table.element(a,gqarr[mypoint-kp3+1,1])
a<-table.element(a,gqarr[mypoint-kp3+1,2])
a<-table.element(a,gqarr[mypoint-kp3+1,3])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable5.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Meta Analysis of Goldfeld-Quandt test for Heteroskedasticity',4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Description',header=TRUE)
a<-table.element(a,'# significant tests',header=TRUE)
a<-table.element(a,'% significant tests',header=TRUE)
a<-table.element(a,'OK/NOK',header=TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'1% type I error level',header=TRUE)
a<-table.element(a,numsignificant1)
a<-table.element(a,numsignificant1/numgqtests)
if (numsignificant1/numgqtests < 0.01) dum <- 'OK' else dum <- 'NOK'
a<-table.element(a,dum)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'5% type I error level',header=TRUE)
a<-table.element(a,numsignificant5)
a<-table.element(a,numsignificant5/numgqtests)
if (numsignificant5/numgqtests < 0.05) dum <- 'OK' else dum <- 'NOK'
a<-table.element(a,dum)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'10% type I error level',header=TRUE)
a<-table.element(a,numsignificant10)
a<-table.element(a,numsignificant10/numgqtests)
if (numsignificant10/numgqtests < 0.1) dum <- 'OK' else dum <- 'NOK'
a<-table.element(a,dum)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable6.tab')
}
 





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