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Type 'q()' to quit R. > x <- array(list(6.3 + ,0.30102999566398 + ,0.65321251377534 + ,0 + ,0.81954393554187 + ,1.6232492903979 + ,3 + ,1 + ,3 + ,2.1 + ,0.25527250510331 + ,1.83884909073726 + ,3.40602894496362 + ,3.66304097489397 + ,2.79518458968242 + ,3 + ,5 + ,4 + ,9.1 + ,-0.15490195998574 + ,1.43136376415899 + ,1.02325245963371 + ,2.25406445291434 + ,2.25527250510331 + ,4 + ,4 + ,4 + ,15.8 + ,0.5910646070265 + ,1.27875360095283 + ,-1.69897000433602 + ,-0.52287874528034 + ,1.54406804435028 + ,1 + ,1 + ,1 + ,5.2 + ,0 + ,1.48287358360875 + ,2.20411998265592 + ,2.22788670461367 + ,2.59328606702046 + ,4 + ,5 + ,4 + ,10.9 + ,0.55630250076729 + ,1.44715803134222 + ,0.51851393987789 + ,1.40823996531185 + ,1.79934054945358 + ,1 + ,2 + ,1 + ,8.3 + ,0.14612803567824 + ,1.69897000433602 + ,1.71733758272386 + ,2.64345267648619 + ,2.36172783601759 + ,1 + ,1 + ,1 + ,11 + ,0.17609125905568 + ,0.84509804001426 + ,-0.36653154442041 + ,0.80617997398389 + ,2.04921802267018 + ,5 + ,4 + ,4 + ,3.2 + ,-0.15490195998574 + ,1.47712125471966 + ,2.66745295288995 + ,2.62634036737504 + ,2.44870631990508 + ,5 + ,5 + ,5 + ,6.3 + ,0.32221929473392 + ,0.54406804435028 + ,-1.09691001300806 + ,0.079181246047625 + ,1.6232492903979 + ,1 + ,1 + ,1 + ,6.6 + ,0.61278385671974 + ,0.77815125038364 + ,-0.10237290870956 + ,0.54406804435028 + ,1.6232492903979 + ,2 + ,2 + ,2 + ,9.5 + ,0.079181246047625 + ,1.01703333929878 + ,-0.69897000433602 + ,0.69897000433602 + ,2.07918124604762 + ,2 + ,2 + ,2 + ,3.3 + ,-0.30102999566398 + ,1.30102999566398 + ,1.44185217577329 + ,2.06069784035361 + ,2.17026171539496 + ,5 + ,5 + ,5 + ,11 + ,0.53147891704226 + ,0.5910646070265 + ,-0.92081875395238 + ,0 + ,1.20411998265592 + ,3 + ,1 + ,2 + ,4.7 + ,0.17609125905568 + ,1.61278385671974 + ,1.92941892571429 + ,2.51188336097887 + ,2.49136169383427 + ,1 + ,3 + ,1 + ,10.4 + ,0.53147891704226 + ,0.95424250943932 + ,-1 + ,0.60205999132796 + ,1.44715803134222 + ,5 + ,1 + ,3 + ,7.4 + ,-0.096910013008056 + ,0.88081359228079 + ,0.01703333929878 + ,0.74036268949424 + ,1.83250891270624 + ,5 + ,3 + ,4 + ,2.1 + ,-0.096910013008056 + ,1.66275783168157 + ,2.71683772329952 + ,2.81624129999178 + ,2.52633927738984 + ,5 + ,5 + ,5 + ,17.9 + ,0.30102999566398 + ,1.38021124171161 + ,-2 + ,-0.60205999132796 + ,1.69897000433602 + ,1 + ,1 + ,1 + ,6.1 + ,0.27875360095283 + ,2 + ,1.79239168949825 + ,3.12057393120585 + ,2.42651126136458 + ,1 + ,1 + ,1 + ,11.9 + ,0.11394335230684 + ,0.50514997831991 + ,-1.69897000433602 + ,-0.39794000867204 + ,1.27875360095283 + ,4 + ,1 + ,3 + ,13.8 + ,0.7481880270062 + ,0.69897000433602 + ,0.23044892137827 + ,0.79934054945358 + ,1.07918124604762 + ,2 + ,1 + ,1 + ,14.3 + ,0.49136169383427 + ,0.81291335664286 + ,0.54406804435028 + ,1.03342375548695 + ,2.07918124604762 + ,2 + ,1 + ,1 + ,15.2 + ,0.25527250510331 + ,1.07918124604762 + ,-0.31875876262441 + ,1.19033169817029 + ,2.14612803567824 + ,2 + ,2 + ,2 + ,10 + ,-0.045757490560675 + ,1.30535136944662 + ,1 + ,2.06069784035361 + ,2.23044892137827 + ,4 + ,4 + ,4 + ,11.9 + ,0.25527250510331 + ,1.11394335230684 + ,0.20951501454263 + ,1.05690485133647 + ,1.23044892137827 + ,2 + ,1 + ,2 + ,6.5 + ,0.27875360095283 + ,1.43136376415899 + ,2.28330122870355 + ,2.25527250510331 + ,2.06069784035361 + ,4 + ,4 + ,4 + ,7.5 + ,-0.045757490560675 + ,1.25527250510331 + ,0.39794000867204 + ,1.08278537031645 + ,1.49136169383427 + ,5 + ,5 + ,5 + ,10.6 + ,0.41497334797082 + ,0.67209785793572 + ,-0.55284196865778 + ,0.27875360095283 + ,1.32221929473392 + ,3 + ,1 + ,3 + ,7.4 + ,0.38021124171161 + ,0.99122607569249 + ,0.62736585659273 + ,1.70243053644553 + ,1.7160033436348 + ,1 + ,1 + ,1 + ,8.4 + ,0.079181246047625 + ,1.46239799789896 + ,0.83250891270624 + ,2.25285303097989 + ,2.2148438480477 + ,2 + ,3 + ,2 + ,5.7 + ,-0.045757490560675 + ,0.84509804001426 + ,-0.1249387366083 + ,1.0899051114394 + ,2.35218251811136 + ,2 + ,2 + ,2 + ,4.9 + ,-0.30102999566398 + ,0.77815125038364 + ,0.55630250076729 + ,1.32221929473392 + ,2.35218251811136 + ,3 + ,2 + ,3 + ,3.2 + ,-0.22184874961636 + ,1.30102999566398 + ,1.74429298312268 + ,2.24303804868629 + ,2.17897694729317 + ,5 + ,5 + ,5 + ,11 + ,0.36172783601759 + ,0.65321251377534 + ,-0.045757490560675 + ,0.41497334797082 + ,1.77815125038364 + ,2 + ,1 + ,2 + ,4.9 + ,-0.30102999566398 + ,0.8750612633917 + ,0.30102999566398 + ,1.0899051114394 + ,2.30102999566398 + ,3 + ,1 + ,3 + ,13.2 + ,0.41497334797082 + ,0.36172783601759 + ,-1 + ,0.39794000867204 + ,1.66275783168157 + ,3 + ,2 + ,2 + ,9.7 + ,-0.22184874961636 + ,1.38021124171161 + ,0.6222140229663 + ,1.76342799356294 + ,2.32221929473392 + ,4 + ,3 + ,4 + ,12.8 + ,0.81954393554187 + ,0.47712125471966 + ,0.54406804435028 + ,0.5910646070265 + ,1.14612803567824 + ,2 + ,1 + ,1) + ,dim=c(9 + ,39) + ,dimnames=list(c('SWS' + ,'PS' + ,'L' + ,'Wb' + ,'Wbr' + ,'tg' + ,'P' + ,'S' + ,'D') + ,1:39)) > y <- array(NA,dim=c(9,39),dimnames=list(c('SWS','PS','L','Wb','Wbr','tg','P','S','D'),1:39)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > par1 = 'pearson' > main = 'Correlation Matrix' > par1 <- 'pearson' > #'GNU S' R Code compiled by R2WASP v. 1.0.44 () > #Author: Patrick Wessa > #To cite this work: Patrick Wessa, (2010), Multivariate Correlation Matrix (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/Patrick.Wessa/rwasp_pairs.wasp/ > #Source of accompanying publication: > #Technical description: > panel.tau <- function(x, y, digits=2, prefix='', cex.cor) + { + usr <- par('usr'); on.exit(par(usr)) + par(usr = c(0, 1, 0, 1)) + rr <- cor.test(x, y, method=par1) + r <- round(rr$p.value,2) + txt <- format(c(r, 0.123456789), digits=digits)[1] + txt <- paste(prefix, txt, sep='') + if(missing(cex.cor)) cex <- 0.5/strwidth(txt) + text(0.5, 0.5, txt, cex = cex) + } > panel.hist <- function(x, ...) + { + usr <- par('usr'); on.exit(par(usr)) + par(usr = c(usr[1:2], 0, 1.5) ) + h <- hist(x, plot = FALSE) + breaks <- h$breaks; nB <- length(breaks) + y <- h$counts; y <- y/max(y) + rect(breaks[-nB], 0, breaks[-1], y, col='grey', ...) + } > postscript(file="/var/www/html/rcomp/tmp/1iffi1269081898.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > pairs(t(y),diag.panel=panel.hist, upper.panel=panel.smooth, lower.panel=panel.tau, main=main) > dev.off() null device 1 > > #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/www/html/rcomp/createtable") > > n <- length(y[,1]) > n [1] 9 > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,paste('Correlations for all pairs of data series (',par1,')',sep=''),n+1,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,' ',header=TRUE) > for (i in 1:n) { + a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE) + } > a<-table.row.end(a) > for (i in 1:n) { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE) + for (j in 1:n) { + r <- cor.test(y[i,],y[j,],method=par1) + a<-table.element(a,round(r$estimate,3)) + } + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/www/html/rcomp/tmp/26src1269081898.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,paste('Correlations for all pairs of data series (',par1,') with p-values',sep=''),3,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'pair',1,TRUE) > a<-table.element(a,'correlation',1,TRUE) > a<-table.element(a,'p-value',1,TRUE) > a<-table.row.end(a) > cor.test(y[1,],y[2,],method=par1) Pearson's product-moment correlation data: y[1, ] and y[2, ] t = 4.3485, df = 37, p-value = 0.0001033 alternative hypothesis: true correlation is not equal to 0 95 percent confidence interval: 0.3258349 0.7579938 sample estimates: cor 0.5815635 > for (i in 1:(n-1)) + { + for (j in (i+1):n) + { + a<-table.row.start(a) + dum <- paste(dimnames(t(x))[[2]][i],';',dimnames(t(x))[[2]][j],sep='') + a<-table.element(a,dum,header=TRUE) + r <- cor.test(y[i,],y[j,],method=par1) + a<-table.element(a,r$estimate) + a<-table.element(a,r$p.value) + a<-table.row.end(a) + } + } > a<-table.end(a) > table.save(a,file="/var/www/html/rcomp/tmp/3fmva1269081898.tab") > > try(system("convert tmp/1iffi1269081898.ps tmp/1iffi1269081898.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.748 0.302 0.866