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Type 'q()' to quit R. > x <- array(list(89,81,109,83,95,90,91,88,102,92,82,96,87,75,85,82,85,78,92,83,71,74,72,94,73,80,78,85,88,81,62,71,73,77,63,77,72,77,63,77,80,87,90,73,82,87,72,78,85,82,96,90,96,80,95,80,87,84,77,85,85,89,87,67,88,89,110,105,98,98),dim=c(5,14),dimnames=list(c('WJ10AFS','WJ10AVA','WJ10ARD','WJ10AMA','WJ10AKN'),1:14)) > y <- array(NA,dim=c(5,14),dimnames=list(c('WJ10AFS','WJ10AVA','WJ10ARD','WJ10AMA','WJ10AKN'),1:14)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > par3 = '25' > par2 = 'TRUE' > par1 = '3' > ylab = 'Test Scores' > xlab = 'CARE Variable Names' > main = 'CARE DATA' > #'GNU S' R Code compiled by R2WASP v. 1.0.44 () > #Author: Dr. Ian E. Holliday > #To cite this work: Ian E. Holliday, 2009, CARE BoxPlot and Descriptives (v1.0.1) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/Ian.Holliday/rwasp_varia1.wasp/ > #Source of accompanying publication: > #Technical description: > par1 <- as.numeric(par1) #colour > par2<- as.logical(par2) # Notches ? > par3<-as.numeric(par3) # % trim > if(par3>45){par3<-45;warning('trim limited to 45%')} > if(par3<0){par3<-0;warning('negative trim makes no sense. Trim is zero.')} > lotrm<-as.integer(length(y[1,])*par3/100)+1 > hitrm<-as.integer(length(y[1,])*(100-par3)/100) > y1<-array(dim=c(dim(y)[1], hitrm-lotrm+1), dimnames=list(dimnames(y)[[1]], 1:(hitrm-lotrm+1) )) > for(i in 1:dim(y)[1]){ + tmp<-order(y[i,]) + y1[i,]<- y[i, tmp[lotrm:hitrm] ] + } > postscript(file="/var/www/rcomp/tmp/1kqu91288086519.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > pairs(t(y)) > dev.off() null device 1 > y<-y1 > z <- as.data.frame(t(y)) > postscript(file="/var/www/rcomp/tmp/2czuc1288086519.ps",horizontal=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > (r<-boxplot(z ,xlab=xlab,ylab=ylab,main=main,notch=par2,col=par1)) $stats [,1] [,2] [,3] [,4] [,5] [1,] 80.0 74.0 78 75 81 [2,] 80.0 79.5 81 77 82 [3,] 82.0 85.0 85 80 83 [4,] 83.5 87.0 87 84 85 [5,] 87.0 89.0 88 88 88 $n [1] 7 7 7 7 7 $conf [,1] [,2] [,3] [,4] [,5] [1,] 79.90986 80.52112 81.4169 75.81971 81.20845 [2,] 84.09014 89.47888 88.5831 84.18029 84.79155 $out numeric(0) $group numeric(0) $names [1] "WJ10AFS" "WJ10AVA" "WJ10ARD" "WJ10AMA" "WJ10AKN" Warning message: In bxp(list(stats = c(80, 80, 82, 83.5, 87, 74, 79.5, 85, 87, 89, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > #Note: the /var/www/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/www/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,hyperlink('http://www.xycoon.com/overview.htm','Boxplot statistics','Boxplot overview'),6,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Variable',1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/lower_whisker.htm','lower whisker','definition of lower whisker'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/lower_hinge.htm','lower hinge','definition of lower hinge'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/central_tendency.htm','median','definitions about measures of central tendency'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/upper_hinge.htm','upper hinge','definition of upper hinge'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/upper_whisker.htm','upper whisker','definition of upper whisker'),1,TRUE) > a<-table.row.end(a) > for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + for (j in 1:5) + { + a<-table.element(a,round(r$stats[j,i], digits=2)) + } + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/www/rcomp/tmp/3gzs01288086519.tab") > if (par2){ + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Boxplot Notches',4,TRUE) + a<-table.row.end(a) + a<-table.row.start(a) + a<-table.element(a,'Variable',1,TRUE) + a<-table.element(a,'lower bound',1,TRUE) + a<-table.element(a,'median',1,TRUE) + a<-table.element(a,'upper bound',1,TRUE) + a<-table.row.end(a) + for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + a<-table.element(a,round(r$conf[1,i], digits=2)) + a<-table.element(a, round(r$stats[3,i], digits=2)) + a<-table.element(a,round(r$conf[2,i], digits=2)) + a<-table.row.end(a) + } + a<-table.end(a) + table.save(a,file="/var/www/rcomp/tmp/410r61288086519.tab") + } > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Boxplot Means',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Variable',1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/trimmed_mean.htm','trimmed mean','definition of trimmed mean'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/unbiased1.htm','unbiased SD','definition of unbiased SD'),1,TRUE) > a<-table.row.end(a) > for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + a<-table.element(a,round(mean(z[i], trim=par3/100, na.rm=TRUE), digits=2)) + a<-table.element(a,round(sd(z[i], na.rm=TRUE), digits=2)) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/www/rcomp/tmp/5c9891288086519.tab") > > try(system("convert tmp/1kqu91288086519.ps tmp/1kqu91288086519.png",intern=TRUE)) character(0) > try(system("convert tmp/2czuc1288086519.ps tmp/2czuc1288086519.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.780 0.350 1.142