R version 2.13.0 (2011-04-13)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i486-pc-linux-gnu (32-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> x <- array(list(162687
+ ,48
+ ,21
+ ,82
+ ,73
+ ,20465
+ ,6200
+ ,23975
+ ,39
+ ,37
+ ,201906
+ ,58
+ ,20
+ ,80
+ ,56
+ ,33629
+ ,10265
+ ,85634
+ ,46
+ ,43
+ ,7215
+ ,0
+ ,0
+ ,0
+ ,0
+ ,1423
+ ,603
+ ,1929
+ ,0
+ ,0
+ ,159169
+ ,72
+ ,29
+ ,90
+ ,69
+ ,25629
+ ,8874
+ ,36294
+ ,54
+ ,54
+ ,257045
+ ,83
+ ,31
+ ,124
+ ,116
+ ,54002
+ ,20323
+ ,72255
+ ,93
+ ,86
+ ,538237
+ ,137
+ ,36
+ ,140
+ ,138
+ ,151036
+ ,26258
+ ,189748
+ ,198
+ ,181
+ ,191582
+ ,65
+ ,26
+ ,100
+ ,76
+ ,33287
+ ,10165
+ ,61834
+ ,42
+ ,42
+ ,211165
+ ,96
+ ,35
+ ,132
+ ,119
+ ,31172
+ ,8247
+ ,68167
+ ,59
+ ,59
+ ,177020
+ ,62
+ ,30
+ ,109
+ ,50
+ ,28113
+ ,8683
+ ,38462
+ ,49
+ ,46
+ ,330887
+ ,72
+ ,27
+ ,108
+ ,81
+ ,57803
+ ,16957
+ ,101219
+ ,83
+ ,77
+ ,122275
+ ,50
+ ,24
+ ,63
+ ,58
+ ,49830
+ ,8058
+ ,43270
+ ,49
+ ,49
+ ,203938
+ ,88
+ ,30
+ ,118
+ ,91
+ ,52143
+ ,20488
+ ,76183
+ ,83
+ ,79
+ ,119300
+ ,68
+ ,22
+ ,71
+ ,41
+ ,21055
+ ,7945
+ ,31476
+ ,39
+ ,37
+ ,220751
+ ,79
+ ,28
+ ,112
+ ,100
+ ,47007
+ ,13448
+ ,62157
+ ,93
+ ,92
+ ,174005
+ ,56
+ ,18
+ ,63
+ ,61
+ ,28735
+ ,5389
+ ,46261
+ ,31
+ ,31
+ ,156326
+ ,54
+ ,22
+ ,86
+ ,74
+ ,59147
+ ,6185
+ ,50063
+ ,29
+ ,28
+ ,145178
+ ,81
+ ,37
+ ,148
+ ,147
+ ,78950
+ ,24369
+ ,64483
+ ,104
+ ,103
+ ,90025
+ ,13
+ ,15
+ ,54
+ ,45
+ ,13497
+ ,70
+ ,2341
+ ,2
+ ,2
+ ,179935
+ ,80
+ ,34
+ ,134
+ ,110
+ ,46154
+ ,17327
+ ,48149
+ ,46
+ ,48
+ ,47066
+ ,19
+ ,18
+ ,57
+ ,41
+ ,53249
+ ,3878
+ ,12743
+ ,27
+ ,25
+ ,109572
+ ,33
+ ,15
+ ,59
+ ,37
+ ,10726
+ ,3149
+ ,18743
+ ,16
+ ,16
+ ,241285
+ ,99
+ ,30
+ ,113
+ ,84
+ ,83700
+ ,20517
+ ,97057
+ ,108
+ ,106
+ ,200429
+ ,38
+ ,25
+ ,96
+ ,67
+ ,40400
+ ,2570
+ ,17675
+ ,36
+ ,35
+ ,149513
+ ,59
+ ,34
+ ,96
+ ,69
+ ,33797
+ ,5162
+ ,33106
+ ,33
+ ,33
+ ,159763
+ ,54
+ ,21
+ ,78
+ ,58
+ ,36205
+ ,5299
+ ,53311
+ ,46
+ ,45
+ ,207078
+ ,63
+ ,21
+ ,80
+ ,60
+ ,30165
+ ,7233
+ ,42754
+ ,65
+ ,64
+ ,217028
+ ,66
+ ,25
+ ,93
+ ,88
+ ,58534
+ ,15657
+ ,59056
+ ,80
+ ,73
+ ,201536
+ ,90
+ ,31
+ ,109
+ ,75
+ ,44663
+ ,15329
+ ,101621
+ ,81
+ ,78
+ ,408684
+ ,75
+ ,31
+ ,115
+ ,98
+ ,92556
+ ,14881
+ ,118120
+ ,69
+ ,63
+ ,217892
+ ,61
+ ,20
+ ,79
+ ,67
+ ,40078
+ ,16318
+ ,79572
+ ,69
+ ,69
+ ,182286
+ ,61
+ ,28
+ ,103
+ ,84
+ ,34711
+ ,9556
+ ,42744
+ ,37
+ ,36
+ ,200604
+ ,72
+ ,22
+ ,71
+ ,62
+ ,31076
+ ,10462
+ ,65931
+ ,45
+ ,41
+ ,137978
+ ,53
+ ,17
+ ,66
+ ,35
+ ,74608
+ ,7192
+ ,38575
+ ,62
+ ,59
+ ,265732
+ ,135
+ ,25
+ ,100
+ ,74
+ ,58092
+ ,4362
+ ,28795
+ ,33
+ ,33
+ ,236546
+ ,73
+ ,25
+ ,100
+ ,93
+ ,42009
+ ,14349
+ ,94440
+ ,77
+ ,76
+ ,230761
+ ,54
+ ,31
+ ,121
+ ,87
+ ,36022
+ ,10881
+ ,38229
+ ,34
+ ,27
+ ,132807
+ ,54
+ ,14
+ ,51
+ ,39
+ ,23333
+ ,8022
+ ,31972
+ ,44
+ ,44
+ ,161703
+ ,46
+ ,35
+ ,119
+ ,101
+ ,53349
+ ,13073
+ ,40071
+ ,43
+ ,43
+ ,253254
+ ,83
+ ,34
+ ,136
+ ,135
+ ,92596
+ ,26641
+ ,132480
+ ,117
+ ,104
+ ,269329
+ ,106
+ ,22
+ ,84
+ ,76
+ ,49598
+ ,14426
+ ,62797
+ ,125
+ ,120
+ ,161273
+ ,44
+ ,34
+ ,136
+ ,118
+ ,44093
+ ,15604
+ ,40429
+ ,49
+ ,44
+ ,107181
+ ,27
+ ,23
+ ,84
+ ,76
+ ,84205
+ ,9184
+ ,45545
+ ,76
+ ,71
+ ,213097
+ ,73
+ ,24
+ ,92
+ ,65
+ ,63369
+ ,5989
+ ,57568
+ ,81
+ ,78
+ ,139667
+ ,71
+ ,26
+ ,103
+ ,97
+ ,60132
+ ,11270
+ ,39019
+ ,111
+ ,106
+ ,171124
+ ,44
+ ,23
+ ,85
+ ,70
+ ,37403
+ ,13958
+ ,53866
+ ,61
+ ,61
+ ,81407
+ ,23
+ ,35
+ ,106
+ ,63
+ ,24460
+ ,7162
+ ,38345
+ ,56
+ ,53
+ ,250921
+ ,78
+ ,24
+ ,96
+ ,96
+ ,46456
+ ,13275
+ ,50210
+ ,54
+ ,51
+ ,239807
+ ,60
+ ,31
+ ,124
+ ,112
+ ,66616
+ ,21224
+ ,80947
+ ,47
+ ,46
+ ,172743
+ ,73
+ ,30
+ ,106
+ ,82
+ ,41554
+ ,10615
+ ,43461
+ ,55
+ ,55
+ ,48188
+ ,12
+ ,22
+ ,82
+ ,39
+ ,22346
+ ,2102
+ ,14812
+ ,14
+ ,14
+ ,169355
+ ,104
+ ,23
+ ,87
+ ,69
+ ,30874
+ ,12396
+ ,37819
+ ,44
+ ,44
+ ,335398
+ ,95
+ ,27
+ ,97
+ ,93
+ ,68701
+ ,18717
+ ,102738
+ ,115
+ ,113
+ ,244729
+ ,57
+ ,30
+ ,107
+ ,76
+ ,35728
+ ,9724
+ ,54509
+ ,57
+ ,55
+ ,200137
+ ,67
+ ,33
+ ,126
+ ,117
+ ,29010
+ ,9863
+ ,62956
+ ,48
+ ,46
+ ,159913
+ ,44
+ ,12
+ ,43
+ ,31
+ ,23110
+ ,8374
+ ,55411
+ ,40
+ ,39
+ ,223936
+ ,53
+ ,26
+ ,96
+ ,65
+ ,38844
+ ,8030
+ ,50611
+ ,51
+ ,51
+ ,101694
+ ,26
+ ,26
+ ,100
+ ,78
+ ,27084
+ ,7509
+ ,26692
+ ,32
+ ,31
+ ,157258
+ ,67
+ ,23
+ ,91
+ ,87
+ ,35139
+ ,14146
+ ,60056
+ ,36
+ ,36
+ ,211586
+ ,36
+ ,38
+ ,136
+ ,85
+ ,57476
+ ,7768
+ ,25155
+ ,47
+ ,47
+ ,181076
+ ,56
+ ,32
+ ,128
+ ,119
+ ,33277
+ ,13823
+ ,42840
+ ,51
+ ,53
+ ,158024
+ ,55
+ ,22
+ ,87
+ ,68
+ ,31141
+ ,7230
+ ,39358
+ ,37
+ ,38
+ ,141491
+ ,54
+ ,22
+ ,74
+ ,60
+ ,61281
+ ,10170
+ ,47241
+ ,52
+ ,52
+ ,130108
+ ,61
+ ,26
+ ,96
+ ,67
+ ,25820
+ ,7573
+ ,49611
+ ,42
+ ,37
+ ,166420
+ ,27
+ ,28
+ ,102
+ ,94
+ ,23284
+ ,5753
+ ,41833
+ ,11
+ ,11
+ ,125440
+ ,58
+ ,33
+ ,122
+ ,100
+ ,35378
+ ,9791
+ ,48930
+ ,47
+ ,45
+ ,195043
+ ,76
+ ,36
+ ,144
+ ,135
+ ,74990
+ ,19365
+ ,110600
+ ,59
+ ,59
+ ,138708
+ ,93
+ ,25
+ ,90
+ ,71
+ ,29653
+ ,9422
+ ,52235
+ ,82
+ ,82
+ ,116552
+ ,59
+ ,25
+ ,97
+ ,78
+ ,64622
+ ,12310
+ ,53986
+ ,49
+ ,49
+ ,31970
+ ,5
+ ,21
+ ,78
+ ,42
+ ,4157
+ ,1283
+ ,4105
+ ,6
+ ,6
+ ,277661
+ ,58
+ ,19
+ ,72
+ ,42
+ ,29245
+ ,6372
+ ,59331
+ ,83
+ ,81
+ ,167284
+ ,47
+ ,14
+ ,53
+ ,16
+ ,50008
+ ,5413
+ ,47796
+ ,56
+ ,56
+ ,135926
+ ,88
+ ,30
+ ,120
+ ,86
+ ,52338
+ ,10837
+ ,38302
+ ,114
+ ,105
+ ,124014
+ ,53
+ ,24
+ ,66
+ ,48
+ ,13310
+ ,3394
+ ,14063
+ ,46
+ ,46
+ ,171518
+ ,81
+ ,39
+ ,150
+ ,131
+ ,92901
+ ,12964
+ ,54414
+ ,46
+ ,46
+ ,108980
+ ,35
+ ,32
+ ,117
+ ,91
+ ,10956
+ ,3495
+ ,9903
+ ,2
+ ,2
+ ,183471
+ ,102
+ ,28
+ ,123
+ ,102
+ ,34241
+ ,11580
+ ,53987
+ ,51
+ ,51
+ ,159966
+ ,71
+ ,29
+ ,114
+ ,91
+ ,75043
+ ,9970
+ ,88937
+ ,96
+ ,95
+ ,103640
+ ,29
+ ,21
+ ,75
+ ,46
+ ,21152
+ ,4911
+ ,21928
+ ,20
+ ,18
+ ,84971
+ ,34
+ ,31
+ ,114
+ ,60
+ ,42249
+ ,10138
+ ,29487
+ ,57
+ ,55
+ ,88882
+ ,54
+ ,26
+ ,94
+ ,69
+ ,42005
+ ,14697
+ ,35334
+ ,49
+ ,48
+ ,304603
+ ,49
+ ,29
+ ,116
+ ,95
+ ,41152
+ ,8464
+ ,57596
+ ,51
+ ,48
+ ,75101
+ ,30
+ ,23
+ ,86
+ ,17
+ ,14399
+ ,4204
+ ,29750
+ ,40
+ ,39
+ ,145043
+ ,57
+ ,25
+ ,90
+ ,61
+ ,28263
+ ,10226
+ ,41029
+ ,40
+ ,40
+ ,95827
+ ,54
+ ,22
+ ,87
+ ,55
+ ,17215
+ ,3456
+ ,12416
+ ,36
+ ,36
+ ,173931
+ ,38
+ ,26
+ ,99
+ ,55
+ ,48140
+ ,8895
+ ,51158
+ ,64
+ ,60
+ ,246034
+ ,63
+ ,33
+ ,132
+ ,124
+ ,62897
+ ,22557
+ ,79935
+ ,117
+ ,114
+ ,115367
+ ,58
+ ,24
+ ,96
+ ,73
+ ,22883
+ ,6900
+ ,26552
+ ,40
+ ,39
+ ,125839
+ ,49
+ ,24
+ ,91
+ ,73
+ ,41622
+ ,8620
+ ,25807
+ ,46
+ ,45
+ ,164078
+ ,46
+ ,21
+ ,77
+ ,67
+ ,40715
+ ,7820
+ ,50620
+ ,61
+ ,59
+ ,158931
+ ,51
+ ,28
+ ,104
+ ,66
+ ,65897
+ ,12112
+ ,61467
+ ,59
+ ,59
+ ,190348
+ ,90
+ ,28
+ ,100
+ ,77
+ ,76542
+ ,13178
+ ,65292
+ ,94
+ ,93
+ ,155226
+ ,45
+ ,25
+ ,94
+ ,83
+ ,37477
+ ,7028
+ ,55516
+ ,36
+ ,35
+ ,146159
+ ,28
+ ,15
+ ,60
+ ,55
+ ,53216
+ ,6616
+ ,42006
+ ,51
+ ,47
+ ,62641
+ ,26
+ ,13
+ ,46
+ ,27
+ ,40911
+ ,9570
+ ,26273
+ ,39
+ ,36
+ ,245267
+ ,52
+ ,36
+ ,135
+ ,115
+ ,57021
+ ,14612
+ ,90248
+ ,62
+ ,59
+ ,199841
+ ,96
+ ,27
+ ,99
+ ,85
+ ,73116
+ ,11219
+ ,61476
+ ,79
+ ,79
+ ,19349
+ ,13
+ ,1
+ ,2
+ ,0
+ ,3895
+ ,786
+ ,9604
+ ,14
+ ,14
+ ,247280
+ ,43
+ ,24
+ ,96
+ ,83
+ ,46609
+ ,11252
+ ,45108
+ ,45
+ ,42
+ ,164457
+ ,42
+ ,31
+ ,109
+ ,90
+ ,29351
+ ,9289
+ ,47232
+ ,43
+ ,41
+ ,72128
+ ,30
+ ,4
+ ,15
+ ,4
+ ,2325
+ ,593
+ ,3439
+ ,8
+ ,8
+ ,104253
+ ,59
+ ,21
+ ,68
+ ,60
+ ,31747
+ ,6562
+ ,30553
+ ,41
+ ,41
+ ,151090
+ ,73
+ ,27
+ ,102
+ ,74
+ ,32665
+ ,8208
+ ,24751
+ ,25
+ ,24
+ ,147990
+ ,40
+ ,26
+ ,93
+ ,55
+ ,19249
+ ,7488
+ ,34458
+ ,22
+ ,22
+ ,87448
+ ,36
+ ,12
+ ,46
+ ,24
+ ,15292
+ ,4574
+ ,24649
+ ,18
+ ,18
+ ,27676
+ ,2
+ ,16
+ ,59
+ ,17
+ ,5842
+ ,522
+ ,2342
+ ,3
+ ,1
+ ,170326
+ ,103
+ ,29
+ ,116
+ ,105
+ ,33994
+ ,12840
+ ,52739
+ ,54
+ ,53
+ ,132148
+ ,30
+ ,26
+ ,29
+ ,20
+ ,13018
+ ,1350
+ ,6245
+ ,6
+ ,6
+ ,95778
+ ,46
+ ,25
+ ,91
+ ,51
+ ,98177
+ ,10623
+ ,35381
+ ,50
+ ,49
+ ,109001
+ ,25
+ ,21
+ ,76
+ ,76
+ ,37941
+ ,5322
+ ,19595
+ ,33
+ ,33
+ ,158833
+ ,59
+ ,24
+ ,86
+ ,61
+ ,31032
+ ,7987
+ ,50848
+ ,54
+ ,50
+ ,150013
+ ,60
+ ,21
+ ,84
+ ,70
+ ,32683
+ ,10566
+ ,39443
+ ,63
+ ,64
+ ,89887
+ ,36
+ ,21
+ ,65
+ ,38
+ ,34545
+ ,1900
+ ,27023
+ ,56
+ ,53
+ ,3616
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,213786
+ ,51
+ ,23
+ ,84
+ ,81
+ ,27525
+ ,10698
+ ,61022
+ ,49
+ ,48
+ ,167411
+ ,79
+ ,33
+ ,114
+ ,78
+ ,66856
+ ,14884
+ ,63528
+ ,90
+ ,90
+ ,177948
+ ,30
+ ,32
+ ,132
+ ,76
+ ,28549
+ ,6852
+ ,34835
+ ,51
+ ,46
+ ,136061
+ ,43
+ ,23
+ ,92
+ ,89
+ ,38610
+ ,6873
+ ,37172
+ ,29
+ ,29
+ ,43410
+ ,7
+ ,1
+ ,3
+ ,3
+ ,2781
+ ,4
+ ,13
+ ,1
+ ,1
+ ,184277
+ ,80
+ ,29
+ ,109
+ ,87
+ ,41211
+ ,9188
+ ,62548
+ ,68
+ ,64
+ ,109873
+ ,32
+ ,20
+ ,81
+ ,55
+ ,22698
+ ,5141
+ ,31334
+ ,29
+ ,29
+ ,151230
+ ,84
+ ,33
+ ,121
+ ,73
+ ,41194
+ ,4260
+ ,20839
+ ,27
+ ,27
+ ,60493
+ ,3
+ ,12
+ ,48
+ ,32
+ ,32689
+ ,443
+ ,5084
+ ,4
+ ,4
+ ,19764
+ ,10
+ ,2
+ ,8
+ ,4
+ ,5752
+ ,2416
+ ,9927
+ ,10
+ ,10
+ ,177559
+ ,47
+ ,21
+ ,80
+ ,70
+ ,26757
+ ,9831
+ ,53229
+ ,47
+ ,47
+ ,154169
+ ,44
+ ,28
+ ,107
+ ,102
+ ,22527
+ ,5953
+ ,29877
+ ,44
+ ,44
+ ,164249
+ ,54
+ ,35
+ ,140
+ ,109
+ ,44810
+ ,9435
+ ,37310
+ ,53
+ ,51
+ ,11796
+ ,1
+ ,2
+ ,8
+ ,1
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,151322
+ ,46
+ ,18
+ ,56
+ ,39
+ ,100674
+ ,7642
+ ,50067
+ ,40
+ ,38
+ ,6836
+ ,0
+ ,1
+ ,4
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,0
+ ,174712
+ ,51
+ ,21
+ ,70
+ ,45
+ ,57786
+ ,6837
+ ,47708
+ ,57
+ ,57
+ ,40248
+ ,8
+ ,4
+ ,14
+ ,7
+ ,5444
+ ,775
+ ,6012
+ ,6
+ ,6
+ ,127628
+ ,38
+ ,29
+ ,104
+ ,86
+ ,28470
+ ,8191
+ ,27749
+ ,24
+ ,22
+ ,88837
+ ,21
+ ,26
+ ,89
+ ,52
+ ,61849
+ ,1661
+ ,47555
+ ,34
+ ,34
+ ,9056
+ ,0
+ ,4
+ ,12
+ ,1
+ ,2179
+ ,548
+ ,1336
+ ,10
+ ,10
+ ,97191
+ ,26
+ ,19
+ ,60
+ ,49
+ ,8019
+ ,3080
+ ,11017
+ ,16
+ ,16
+ ,149554
+ ,53
+ ,23
+ ,88
+ ,75
+ ,39644
+ ,13400
+ ,55184
+ ,93
+ ,93
+ ,111408
+ ,17
+ ,22
+ ,88
+ ,56
+ ,23494
+ ,8181
+ ,43485
+ ,28
+ ,22)
+ ,dim=c(10
+ ,137)
+ ,dimnames=list(c('TiRFC'
+ ,'NoBC'
+ ,'NoRC'
+ ,'FMPR'
+ ,'FMPR+'
+ ,'Noc'
+ ,'NoR'
+ ,'NoS'
+ ,'NoiH'
+ ,'NoiB')
+ ,1:137))
>  y <- array(NA,dim=c(10,137),dimnames=list(c('TiRFC','NoBC','NoRC','FMPR','FMPR+','Noc','NoR','NoS','NoiH','NoiB'),1:137))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par1 = 'pearson'
> main = 'Correlation Matrix'
> panel.tau <- function(x, y, digits=2, prefix='', cex.cor)
+ {
+ usr <- par('usr'); on.exit(par(usr))
+ par(usr = c(0, 1, 0, 1))
+ rr <- cor.test(x, y, method=par1)
+ r <- round(rr$p.value,2)
+ txt <- format(c(r, 0.123456789), digits=digits)[1]
+ txt <- paste(prefix, txt, sep='')
+ if(missing(cex.cor)) cex <- 0.5/strwidth(txt)
+ text(0.5, 0.5, txt, cex = cex)
+ }
> panel.hist <- function(x, ...)
+ {
+ usr <- par('usr'); on.exit(par(usr))
+ par(usr = c(usr[1:2], 0, 1.5) )
+ h <- hist(x, plot = FALSE)
+ breaks <- h$breaks; nB <- length(breaks)
+ y <- h$counts; y <- y/max(y)
+ rect(breaks[-nB], 0, breaks[-1], y, col='grey', ...)
+ }
> postscript(file="/var/wessaorg/rcomp/tmp/1k5nb1324583513.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> pairs(t(y),diag.panel=panel.hist, upper.panel=panel.smooth, lower.panel=panel.tau, main=main)
> dev.off()
null device 
          1 
> 
> #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/wessaorg/rcomp/createtable")
> 
> n <- length(y[,1])
> n
[1] 10
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,paste('Correlations for all pairs of data series (method=',par1,')',sep=''),n+1,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,' ',header=TRUE)
> for (i in 1:n) {
+ a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE)
+ }
> a<-table.row.end(a)
> for (i in 1:n) {
+ a<-table.row.start(a)
+ a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE)
+ for (j in 1:n) {
+ r <- cor.test(y[i,],y[j,],method=par1)
+ a<-table.element(a,round(r$estimate,3))
+ }
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/2v4k91324583513.tab") 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Correlations for all pairs of data series with p-values',4,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'pair',1,TRUE)
> a<-table.element(a,'Pearson r',1,TRUE)
> a<-table.element(a,'Spearman rho',1,TRUE)
> a<-table.element(a,'Kendall tau',1,TRUE)
> a<-table.row.end(a)
> cor.test(y[1,],y[2,],method=par1)

	Pearson's product-moment correlation

data:  y[1, ] and y[2, ] 
t = 12.4223, df = 135, p-value < 2.2e-16
alternative hypothesis: true correlation is not equal to 0 
95 percent confidence interval:
 0.6411441 0.8000475 
sample estimates:
      cor 
0.7303276 

> for (i in 1:(n-1))
+ {
+ for (j in (i+1):n)
+ {
+ a<-table.row.start(a)
+ dum <- paste(dimnames(t(x))[[2]][i],';',dimnames(t(x))[[2]][j],sep='')
+ a<-table.element(a,dum,header=TRUE)
+ rp <- cor.test(y[i,],y[j,],method='pearson')
+ a<-table.element(a,round(rp$estimate,4))
+ rs <- cor.test(y[i,],y[j,],method='spearman')
+ a<-table.element(a,round(rs$estimate,4))
+ rk <- cor.test(y[i,],y[j,],method='kendall')
+ a<-table.element(a,round(rk$estimate,4))
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'p-value',header=T)
+ a<-table.element(a,paste('(',round(rp$p.value,4),')',sep=''))
+ a<-table.element(a,paste('(',round(rs$p.value,4),')',sep=''))
+ a<-table.element(a,paste('(',round(rk$p.value,4),')',sep=''))
+ a<-table.row.end(a)
+ }
+ }
There were 45 warnings (use warnings() to see them)
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/3jmwp1324583513.tab") 
> 
> try(system("convert tmp/1k5nb1324583513.ps tmp/1k5nb1324583513.png",intern=TRUE))
character(0)
> 
> 
> proc.time()
   user  system elapsed 
  2.145   0.120   2.259