R version 2.13.0 (2011-04-13)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i486-pc-linux-gnu (32-bit)

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> y <- c(4.6,4,4.8,4,5,5,4,4,4.4,4,4,5,3.8,4.6,4,4.6,4.666666667,4,4,4.4,4.8,5.8,4.6,4.75,5,2.75,4,3.8,4.4,4.8,4.25,4.4,4,4.5,5,3.5,2,4.4,4.4,4.25,3.25,4.2,4.75,4.4,4,4.2,5,4.6,4.4,4,4.4,4.5,5.2,4.4,3.25,4.6,3.75,5,3.8,4,5.4,5,5,4.2,4.4,4,4.6,4.2,5.2,6.4,4,4,5,4,4.2,4,4,4,4,4,4.2,4,4,4,5.2,4.2,4.8,4,4.8,5,4.6,4,4.4,4,3.8,4.5)
> x <- c(4.4,4.2,5.2,5.2,4.4,5.5,4,4,4,3.8,4,5.25,3.6,4.4,4,4.4,4.333333333,4.6,4,4.4,5,5.2,5.2,4.6,4.6,2.333333333,4,3.8,4,4.6,4.75,4.4,4,4,5.2,3.8,2.5,3.2,4.2,4,3.25,4.2,4.75,4.4,4,4.2,4,4.2,4.4,4,4.6,4.4,4,4.8,2.25,4.8,3.75,5.6,4.2,4.2,5,5.8,5,4,4.4,4.4,4.4,4.4,5.8,6,4,4,5,4,4.2,4.4,4,4,4,4.2,4.6,4.4,4.4,4,5,4.2,5,4,4.8,4,4.6,4,4.4,4,3.4,5.8)
> par20 = ''
> par19 = ''
> par18 = ''
> par17 = ''
> par16 = ''
> par15 = ''
> par14 = ''
> par13 = ''
> par12 = ''
> par11 = ''
> par10 = ''
> par9 = ''
> par8 = ''
> par7 = ''
> par6 = ''
> par5 = ''
> par4 = ''
> par3 = ''
> par2 = 'two.sided'
> par1 = 'spearman'
> ylab = 'specappliedmean'
> xlab = 'compappliedmean'
> postscript(file="/var/wessaorg/rcomp/tmp/1ntkf1320160648.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> plot(x,y, xlab=xlab, ylab=ylab)
> abline(coef=(lm(y ~ x))$coeff, col='red')
> ctp<-cor.test(x, y, use='pair', method='pearson')
> legend('bottomright', c('cor =', as.character(round(ctp$estimate, digits=4))))
> dev.off()
null device 
          1 
> (sw1<-shapiro.test(x))

	Shapiro-Wilk normality test

data:  x 
W = 0.9259, p-value = 4.195e-05

> (sw2<-shapiro.test(y))

	Shapiro-Wilk normality test

data:  y 
W = 0.9226, p-value = 2.799e-05

> (cxy<-cor.test(x, y, method=par1))

	Spearman's rank correlation rho

data:  x and y 
S = 39473.31, p-value < 2.2e-16
alternative hypothesis: true rho is not equal to 0 
sample estimates:
      rho 
0.7322754 

Warning message:
In cor.test.default(x, y, method = par1) :
  Cannot compute exact p-values with ties
> 
> #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/wessaorg/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,paste('Shapiro Test (', xlab,')',sep=''),3,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Statistic W',header=TRUE)
> a<-table.element(a,'Probability',header=TRUE)
> a<-table.element(a,'Link',header=TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,round(sw1$statistic, digits=4))
> a<-table.element(a,round(sw1$p.value, digits=4))
> a<-table.element(a,hyperlink('http://en.wikipedia.org/wiki/Shapiro%E2%80%93Wilk_test','Shapiro-Wilk Test','Shapiro-Wilk Test'))
> a<-table.row.end(a)
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/2bl1s1320160648.tab") 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a, paste('Shapiro Test (', ylab,')',sep=''),3,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Statistic W',header=TRUE)
> a<-table.element(a,'probability',header=TRUE)
> a<-table.element(a,'Link',header=TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,round(sw2$statistic, digits=4))
> a<-table.element(a,round(sw2$p.value, digits=4))
> a<-table.element(a,hyperlink('http://en.wikipedia.org/wiki/Shapiro%E2%80%93Wilk_test','Shapiro-Wilk Test','Shapiro-Wilk Test'))
> a<-table.row.end(a)
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/3f66b1320160648.tab") 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Correlation Test X-Y',5,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Statistic',header=TRUE)
> a<-table.element(a,'Value',header=TRUE)
> a<-table.element(a,'probability',header=TRUE)
> a<-table.element(a,'Method',header=TRUE)
> a<-table.element(a,'alternative',header=TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,names(cxy$estimate))
> a<-table.element(a,round(cxy$estimate, digits=4))
> a<-table.element(a,round(cxy$p.value, digits=4))
> a<-table.element(a,cxy$method)
> a<-table.element(a,cxy$alternative)
> a<-table.row.end(a)
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/4meia1320160648.tab") 
> 
> try(system("convert tmp/1ntkf1320160648.ps tmp/1ntkf1320160648.png",intern=TRUE))
character(0)
> 
> 
> proc.time()
   user  system elapsed 
  0.508   0.079   0.585