R version 2.13.0 (2011-04-13) Copyright (C) 2011 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: i486-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(100.17,102.01,100.3,99.94,100.16,100.18,99.98,100.04,100.05,100.11,100.11,101.03,100.84,102.68,101.27,100.28,100.82,100.87,101.23,101.09,101.22,101.33,101.3,102.39,101.69,103.75,102.99,100.8,102.21,102.45,102.49,102.4,102.99,103.19,103.35,104.44,103.42,105.81,104.25,103.78,104.53,105.01,104.83,104.55,105.16,105.06,105.2,105.87,105.41,107.89,106.06,105.5,106.71,106.34,106.11,106.15,106.61,106.63,106.27,105.59,107.09,108.53,108.01,106.52,107.27,107.58,107.36,107.23,107.54,107.64,108.23,108.42) > par2 = '12' > par1 = '50' > par2 <- '12' > par1 <- '50' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Blocked Bootstrap Plot for Central Tendency (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_bootstrapplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > par2 <- as.numeric(par2) > if (par1 < 10) par1 = 10 > if (par1 > 5000) par1 = 5000 > if (par2 < 3) par2 = 3 > if (par2 > length(x)) par2 = length(x) > library(lattice) > library(boot) Attaching package: 'boot' The following object(s) are masked from 'package:lattice': melanoma > boot.stat <- function(s) + { + s.mean <- mean(s) + s.median <- median(s) + s.midrange <- (max(s) + min(s)) / 2 + c(s.mean, s.median, s.midrange) + } > (r <- tsboot(x, boot.stat, R=par1, l=12, sim='fixed')) BLOCK BOOTSTRAP FOR TIME SERIES Fixed Block Length of 12 Call: tsboot(tseries = x, statistic = boot.stat, R = par1, l = 12, sim = "fixed") Bootstrap Statistics : original bias std. error t1* 103.8376 0.0614 0.9009393 t2* 103.7650 0.1674 1.5311261 t3* 104.2350 0.0001 0.2403388 > postscript(file="/var/wessaorg/rcomp/tmp/170831335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,1],type='p',ylab='simulated values',main='Simulation of Mean') > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2eyea1335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,2],type='p',ylab='simulated values',main='Simulation of Median') > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/3uy8w1335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,3],type='p',ylab='simulated values',main='Simulation of Midrange') > grid() > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/4qwas1335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,1],col='black',main='Density Plot',xlab='mean') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/57bay1335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,2],col='black',main='Density Plot',xlab='median') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/6uz1d1335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,3],col='black',main='Density Plot',xlab='midrange') > dev.off() null device 1 > z <- data.frame(cbind(r$t[,1],r$t[,2],r$t[,3])) > colnames(z) <- list('mean','median','midrange') > postscript(file="/var/wessaorg/rcomp/tmp/7lrpi1335534838.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > boxplot(z,notch=TRUE,ylab='simulated values',main='Bootstrap Simulation - Central Tendency') > grid() > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Estimation Results of Blocked Bootstrap',6,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'statistic',header=TRUE) > a<-table.element(a,'Q1',header=TRUE) > a<-table.element(a,'Estimate',header=TRUE) > a<-table.element(a,'Q3',header=TRUE) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,'IQR',header=TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'mean',header=TRUE) > q1 <- quantile(r$t[,1],0.25)[[1]] > q3 <- quantile(r$t[,1],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[1]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,1]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'median',header=TRUE) > q1 <- quantile(r$t[,2],0.25)[[1]] > q3 <- quantile(r$t[,2],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[2]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,2]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'midrange',header=TRUE) > q1 <- quantile(r$t[,3],0.25)[[1]] > q3 <- quantile(r$t[,3],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[3]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,3]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/8z0r71335534838.tab") > > try(system("convert tmp/170831335534838.ps tmp/170831335534838.png",intern=TRUE)) character(0) > try(system("convert tmp/2eyea1335534838.ps tmp/2eyea1335534838.png",intern=TRUE)) character(0) > try(system("convert tmp/3uy8w1335534838.ps tmp/3uy8w1335534838.png",intern=TRUE)) character(0) > try(system("convert tmp/4qwas1335534838.ps tmp/4qwas1335534838.png",intern=TRUE)) character(0) > try(system("convert tmp/57bay1335534838.ps tmp/57bay1335534838.png",intern=TRUE)) character(0) > try(system("convert tmp/6uz1d1335534838.ps tmp/6uz1d1335534838.png",intern=TRUE)) character(0) > try(system("convert tmp/7lrpi1335534838.ps tmp/7lrpi1335534838.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.142 0.444 2.626