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Type 'q()' to quit R. > x <- c(2.35,2.35,2.35,2.35,2.35,2.35,2.35,2.36,2.36,2.36,2.36,2.36,2.36,2.37,2.37,2.39,2.4,2.41,2.41,2.42,2.44,2.44,2.44,2.44,2.44,2.45,2.45,2.46,2.47,2.48,2.48,2.48,2.49,2.5,2.5,2.5,2.5,2.5,2.5,2.5,2.51,2.52,2.54,2.56,2.57,2.57,2.58,2.59,2.6,2.6,2.62,2.62,2.63,2.63,2.63,2.63,2.63,2.63,2.63,2.64) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 60 > (np <- floor(n / par1)) [1] 5 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 5 5 5 5 5 5 5 5 5 5 5 5 > arr [,1] [,2] [,3] [,4] [,5] [,6] [1,] 2.35 2.36 2.44 2.50 2.60 NA [2,] 2.35 2.37 2.45 2.50 2.60 NA [3,] 2.35 2.37 2.45 2.50 2.62 NA [4,] 2.35 2.39 2.46 2.50 2.62 NA [5,] 2.35 2.40 2.47 2.51 2.63 NA [6,] 2.35 2.41 2.48 2.52 2.63 NA [7,] 2.35 2.41 2.48 2.54 2.63 NA [8,] 2.36 2.42 2.48 2.56 2.63 NA [9,] 2.36 2.44 2.49 2.57 2.63 NA [10,] 2.36 2.44 2.50 2.57 2.63 NA [11,] 2.36 2.44 2.50 2.58 2.63 NA [12,] 2.36 2.44 2.50 2.59 2.64 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/wessaorg/rcomp/tmp/1q85t1335778054.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2c42j1335778054.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/3zefb1335778054.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/4gj9f1335778054.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 2.35 2.35 2.35 2.35 2.35 2.35 2.35 2.36 2.36 2.36 2.36 2.36 [2,] 2.36 2.37 2.37 2.39 2.40 2.41 2.41 2.42 2.44 2.44 2.44 2.44 [3,] 2.44 2.45 2.45 2.46 2.47 2.48 2.48 2.48 2.49 2.50 2.50 2.50 [4,] 2.50 2.50 2.50 2.50 2.51 2.52 2.54 2.56 2.57 2.57 2.58 2.59 [5,] 2.60 2.60 2.62 2.62 2.63 2.63 2.63 2.63 2.63 2.63 2.63 2.64 $n [1] 5 5 5 5 5 5 5 5 5 5 5 5 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 2.341076 2.358142 2.358142 2.382274 2.392274 2.402274 2.388142 2.381076 [2,] 2.538924 2.541858 2.541858 2.537726 2.547726 2.557726 2.571858 2.578924 [,9] [,10] [,11] [,12] [1,] 2.398142 2.408142 2.401076 2.39401 [2,] 2.581858 2.591858 2.598924 2.60599 $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(2.35, 2.36, 2.44, 2.5, 2.6, 2.35, 2.37, 2.45, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/5c1sc1335778054.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [1,] 2.35 2.36 2.440 2.50 2.62 NA [2,] 2.35 2.38 2.455 2.50 2.62 NA [3,] 2.35 2.41 2.480 2.53 2.63 NA [4,] 2.36 2.44 2.495 2.57 2.63 NA [5,] 2.36 2.44 2.500 2.59 2.64 NA $n [1] 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [1,] 2.345439 2.382634 2.461756 2.498073 2.625439 NA [2,] 2.354561 2.437366 2.498244 2.561927 2.634561 NA $out [1] 2.6 2.6 $group [1] 5 5 $names [1] "1" "2" "3" "4" "5" NA Warning message: In bxp(list(stats = c(2.35, 2.35, 2.35, 2.36, 2.36, 2.36, 2.38, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/66d4v1335778054.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 0.1016366 0.27 0.11 [2,] 0.1055449 0.27 0.12 [3,] 0.1074007 0.27 0.13 [4,] 0.1083728 0.28 0.14 [5,] 0.1126055 0.28 0.15 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 0.1061109 0.2654389 0.1208779 [2,] 0.1086905 0.2745611 0.1391221 $out [1] 0.25 0.25 $group [1] 2 2 $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(0.101636607578175, 0.105544912001456, 0.107400691013306, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/1q85t1335778054.ps tmp/1q85t1335778054.png",intern=TRUE)) character(0) > try(system("convert tmp/2c42j1335778054.ps tmp/2c42j1335778054.png",intern=TRUE)) character(0) > try(system("convert tmp/3zefb1335778054.ps tmp/3zefb1335778054.png",intern=TRUE)) character(0) > try(system("convert tmp/4gj9f1335778054.ps tmp/4gj9f1335778054.png",intern=TRUE)) character(0) > try(system("convert tmp/5c1sc1335778054.ps tmp/5c1sc1335778054.png",intern=TRUE)) character(0) > try(system("convert tmp/66d4v1335778054.ps tmp/66d4v1335778054.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.425 0.497 1.923