R version 2.13.0 (2011-04-13)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i486-pc-linux-gnu (32-bit)

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> par9 = 'cases'
> par8 = 'ATTLES separate'
> par7 = '1'
> par6 = 'all'
> par5 = 'all'
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases or variables'
> main = 'Dendrogram'
> par9 <- 'cases'
> par8 <- 'ATTLES separate'
> par7 <- '1'
> par6 <- 'all'
> par5 <- 'all'
> par4 <- 'FALSE'
> par3 <- 'FALSE'
> par2 <- 'ALL'
> par1 <- 'ward'
> #'GNU S' R Code compiled by R2WASP v. 1.2.291 ()
> #Author: root
> #To cite this work: Wessa, P., (2012), Hierarchical Clustering (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_hierarchicalclustering.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #
> x <- as.data.frame(read.table(file='http://www.wessa.net/download/utaut.csv',sep=',',header=T))
> x$U25 <- 6-x$U25
> if(par5 == 'female') x <- x[x$Gender==0,]
> if(par5 == 'male') x <- x[x$Gender==1,]
> if(par6 == 'prep') x <- x[x$Pop==1,]
> if(par6 == 'bachelor') x <- x[x$Pop==0,]
> if(par7 != 'all') {
+ x <- x[x$Year==as.numeric(par7),]
+ }
> cAc <- with(x,cbind( A1, A2, A3, A4, A5, A6, A7, A8, A9,A10))
> cAs <- with(x,cbind(A11,A12,A13,A14,A15,A16,A17,A18,A19,A20))
> cA <- cbind(cAc,cAs)
> cCa <- with(x,cbind(C1,C3,C5,C7, C9,C11,C13,C15,C17,C19,C21,C23,C25,C27,C29,C31,C33,C35,C37,C39,C41,C43,C45,C47))
> cCp <- with(x,cbind(C2,C4,C6,C8,C10,C12,C14,C16,C18,C20,C22,C24,C26,C28,C30,C32,C34,C36,C38,C40,C42,C44,C46,C48))
> cC <- cbind(cCa,cCp)
> cU <- with(x,cbind(U1,U2,U3,U4,U5,U6,U7,U8,U9,U10,U11,U12,U13,U14,U15,U16,U17,U18,U19,U20,U21,U22,U23,U24,U25,U26,U27,U28,U29,U30,U31,U32,U33))
> cE <- with(x,cbind(BC,NNZFG,MRT,AFL,LPM,LPC,W,WPA))
> cX <- with(x,cbind(X1,X2,X3,X4,X5,X6,X7,X8,X9,X10,X11,X12,X13,X14,X15,X16,X17,X18))
> if (par8=='ATTLES connected') x <- cAc
> if (par8=='ATTLES separate') x <- cAs
> if (par8=='ATTLES all') x <- cA
> if (par8=='COLLES actuals') x <- cCa
> if (par8=='COLLES preferred') x <- cCp
> if (par8=='COLLES all') x <- cC
> if (par8=='CSUQ') x <- cU
> if (par8=='Learning Activities') x <- cE
> if (par8=='Exam Items') x <- cX
> ncol <- length(x[1,])
> for (jjj in 1:ncol) {
+ x <- x[!is.na(x[,jjj]),]
+ }
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == TRUE){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> if (par9=='variables') {
+ x <- t(x)
+ } else {
+ ncol <- length(x[1,])
+ colnames(x) <- 1:ncol
+ }
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 228 members at h = 55.7]
  |--[dendrogram w/ 2 branches and 154 members at h = 35.3]
  |  |--[dendrogram w/ 2 branches and 49 members at h = 14.7]
  |  |  |--[dendrogram w/ 2 branches and 26 members at h = 7.02]
  |  |  |  |--[dendrogram w/ 2 branches and 11 members at h = 4.19]
  |  |  |  |  |--[dendrogram w/ 2 branches and 5 members at h = 3.32]
  |  |  |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2]
  |  |  |  |  |  |  |--leaf 19 
  |  |  |  |  |  |  `--leaf 190 
  |  |  |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2.55]
  |  |  |  |  |     |--leaf 167 
  |  |  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |  |  |  |  |        |--leaf 26 
  |  |  |  |  |        `--leaf 62 
  |  |  |  |  `--[dendrogram w/ 2 branches and 6 members at h = 3.81]
  |  |  |  |     |--leaf 176 
  |  |  |  |     `--[dendrogram w/ 2 branches and 5 members at h = 2.99]
  |  |  |  |        |--[dendrogram w/ 2 branches and 3 members at h = 1.89]
  |  |  |  |        |  |--leaf 144 
  |  |  |  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |  |  |        |     |--leaf 11 
  |  |  |  |        |     `--leaf 136 
  |  |  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |  |  |  |           |--leaf 145 
  |  |  |  |           `--leaf 179 
  |  |  |  `--[dendrogram w/ 2 branches and 15 members at h = 6.06]
  |  |  |     |--[dendrogram w/ 2 branches and 6 members at h = 3.38]
  |  |  |     |  |--[dendrogram w/ 2 branches and 3 members at h = 1.8]
  |  |  |     |  |  |--leaf 226 
  |  |  |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |  |  |     |  |     |--leaf 165 
  |  |  |     |  |     `--leaf 204 
  |  |  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 2.55]
  |  |  |     |     |--leaf 107 
  |  |  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |  |  |     |        |--leaf 72 
  |  |  |     |        `--leaf 134 
  |  |  |     `--[dendrogram w/ 2 branches and 9 members at h = 3.7]
  |  |  |        |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |  |        |  |--leaf 25 
  |  |  |        |  `--leaf 148 
  |  |  |        `--[dendrogram w/ 2 branches and 7 members at h = 2.81]
  |  |  |           |--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |  |  |           |  |--leaf 30 
  |  |  |           |  `--leaf 140 
  |  |  |           `--[dendrogram w/ 2 branches and 5 members at h = 2.33]
  |  |  |              |--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |  |  |              |  |--leaf 93 
  |  |  |              |  `--leaf 173 
  |  |  |              `--[dendrogram w/ 2 branches and 3 members at h = 1.8]
  |  |  |                 |--leaf 207 
  |  |  |                 `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |  |  |                    |--leaf 52 
  |  |  |                    `--leaf 155 
  |  |  `--[dendrogram w/ 2 branches and 23 members at h = 12.1]
  |  |     |--[dendrogram w/ 2 branches and 12 members at h = 6.08]
  |  |     |  |--[dendrogram w/ 2 branches and 4 members at h = 4.14]
  |  |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |     |  |  |  |--leaf 39 
  |  |     |  |  |  `--leaf 163 
  |  |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.83]
  |  |     |  |     |--leaf 43 
  |  |     |  |     `--leaf 53 
  |  |     |  `--[dendrogram w/ 2 branches and 8 members at h = 4.78]
  |  |     |     |--[dendrogram w/ 2 branches and 3 members at h = 2.77]
  |  |     |     |  |--leaf 153 
  |  |     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 2]
  |  |     |     |     |--leaf 20 
  |  |     |     |     `--leaf 205 
  |  |     |     `--[dendrogram w/ 2 branches and 5 members at h = 2.87]
  |  |     |        |--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |  |     |        |  |--leaf 83 
  |  |     |        |  `--leaf 164 
  |  |     |        `--[dendrogram w/ 2 branches and 3 members at h = 2.21]
  |  |     |           |--leaf 211 
  |  |     |           `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |  |     |              |--leaf 69 
  |  |     |              `--leaf 92 
  |  |     `--[dendrogram w/ 2 branches and 11 members at h = 8.31]
  |  |        |--[dendrogram w/ 2 branches and 4 members at h = 4.3]
  |  |        |  |--leaf 197 
  |  |        |  `--[dendrogram w/ 2 branches and 3 members at h = 3.93]
  |  |        |     |--leaf 91 
  |  |        |     `--[dendrogram w/ 2 branches and 2 members at h = 3.16]
  |  |        |        |--leaf 78 
  |  |        |        `--leaf 127 
  |  |        `--[dendrogram w/ 2 branches and 7 members at h = 5.56]
  |  |           |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |           |  |--leaf 45 
  |  |           |  `--leaf 170 
  |  |           `--[dendrogram w/ 2 branches and 5 members at h = 4.85]
  |  |              |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |  |              |  |--leaf 10 
  |  |              |  `--leaf 135 
  |  |              `--[dendrogram w/ 2 branches and 3 members at h = 3.27]
  |  |                 |--leaf 191 
  |  |                 `--[dendrogram w/ 2 branches and 2 members at h = 2.83]
  |  |                    |--leaf 202 
  |  |                    `--leaf 206 
  |  `--[dendrogram w/ 2 branches and 105 members at h = 26.2]
  |     |--[dendrogram w/ 2 branches and 50 members at h = 19.8]
  |     |  |--[dendrogram w/ 2 branches and 13 members at h = 6.04]
  |     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 2.78]
  |     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |     |  |  |  |  |--leaf 44 
  |     |  |  |  |  `--leaf 125 
  |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2]
  |     |  |  |     |--leaf 106 
  |     |  |  |     `--leaf 194 
  |     |  |  `--[dendrogram w/ 2 branches and 9 members at h = 4.49]
  |     |  |     |--[dendrogram w/ 2 branches and 3 members at h = 2.45]
  |     |  |     |  |--leaf 42 
  |     |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |     |  |     |     |--leaf 79 
  |     |  |     |     `--leaf 111 
  |     |  |     `--[dendrogram w/ 2 branches and 6 members at h = 3.54]
  |     |  |        |--[dendrogram w/ 2 branches and 2 members at h = 2.45]
  |     |  |        |  |--leaf 29 
  |     |  |        |  `--leaf 131 
  |     |  |        `--[dendrogram w/ 2 branches and 4 members at h = 2.96]
  |     |  |           |--leaf 218 
  |     |  |           `--[dendrogram w/ 2 branches and 3 members at h = 2.49]
  |     |  |              |--leaf 183 
  |     |  |              `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |     |  |                 |--leaf 22 
  |     |  |                 `--leaf 68 
  |     |  `--[dendrogram w/ 2 branches and 37 members at h = 9.58]
  |     |     |--[dendrogram w/ 2 branches and 14 members at h = 4.89]
  |     |     |  |--[dendrogram w/ 2 branches and 5 members at h = 3.11]
  |     |     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 2.15]
  |     |     |  |  |  |--leaf 147 
  |     |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 1]
  |     |     |  |  |     |--leaf 34 
  |     |     |  |  |     `--leaf 168 
  |     |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |     |     |  |     |--leaf 60 
  |     |     |  |     `--leaf 181 
  |     |     |  `--[dendrogram w/ 2 branches and 9 members at h = 3.91]
  |     |     |     |--[dendrogram w/ 2 branches and 2 members at h = 2]
  |     |     |     |  |--leaf 177 
  |     |     |     |  `--leaf 213 
  |     |     |     `--[dendrogram w/ 2 branches and 7 members at h = 3.5]
  |     |     |        |--[dendrogram w/ 2 branches and 3 members at h = 1.91]
  |     |     |        |  |--leaf 124 
  |     |     |        |  `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |     |     |        |     |--leaf 87 
  |     |     |        |     `--leaf 216 
  |     |     |        `--[dendrogram w/ 2 branches and 4 members at h = 2.48]
  |     |     |           |--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |     |     |           |  |--leaf 41 
  |     |     |           |  `--leaf 54 
  |     |     |           `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |     |     |              |--leaf 24 
  |     |     |              `--leaf 174 
  |     |     `--[dendrogram w/ 2 branches and 23 members at h = 7.56]
  |     |        |--[dendrogram w/ 2 branches and 10 members at h = 4.43]
  |     |        |  |--[dendrogram w/ 2 branches and 4 members at h = 2.23]
  |     |        |  |  |--[dendrogram w/ 2 branches and 2 members at h = 1]
  |     |        |  |  |  |--leaf 123 
  |     |        |  |  |  `--leaf 137 
  |     |        |  |  `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |     |        |  |     |--leaf 81 
  |     |        |  |     `--leaf 186 
  |     |        |  `--[dendrogram w/ 2 branches and 6 members at h = 3.87]
  |     |        |     |--[dendrogram w/ 2 branches and 3 members at h = 2.31]
  |     |        |     |  |--leaf 21 
  |     |        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 0]
  |     |        |     |     |--leaf 57 
  |     |        |     |     `--leaf 86 
  |     |        |     `--[dendrogram w/ 2 branches and 3 members at h = 3.21]
  |     |        |        |--leaf 152 
  |     |        |        `--[dendrogram w/ 2 branches and 2 members at h = 2.65]
  |     |        |           |--leaf 100 
  |     |        |           `--leaf 122 
  |     |        `--[dendrogram w/ 2 branches and 13 members at h = 6.13]
  |     |           |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |     |           |  |--leaf 7 
  |     |           |  `--leaf 133 
  |     |           `--[dendrogram w/ 2 branches and 11 members at h = 5.36]
  |     |              |--[dendrogram w/ 2 branches and 6 members at h = 3.04]
  |     |              |  |--[dendrogram w/ 2 branches and 2 members at h = 2]
  |     |              |  |  |--leaf 2 
  |     |              |  |  `--leaf 75 
  |     |              |  `--[dendrogram w/ 2 branches and 4 members at h = 2.87]
  |     |              |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |     |              |     |  |--leaf 3 
  |     |              |     |  `--leaf 128 
  |     |              |     `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |     |              |        |--leaf 99 
  |     |              |        `--leaf 101 
  |     |              `--[dendrogram w/ 2 branches and 5 members at h = 3.1]
  |     |                 |--[dendrogram w/ 2 branches and 2 members at h = 2]
  |     |                 |  |--leaf 64 
  |     |                 |  `--leaf 104 
  |     |                 `--[dendrogram w/ 2 branches and 3 members at h = 3.06]
  |     |                    |--leaf 109 
  |     |                    `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |     |                       |--leaf 50 
  |     |                       `--leaf 110 
  |     `--[dendrogram w/ 2 branches and 55 members at h = 22.1]
  |        |--[dendrogram w/ 2 branches and 24 members at h = 10.6]
  |        |  |--[dendrogram w/ 2 branches and 15 members at h = 6.33]
  |        |  |  |--[dendrogram w/ 2 branches and 7 members at h = 4.55]
  |        |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 1.84]
  |        |  |  |  |  |--leaf 95 
  |        |  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |        |  |  |  |     |--leaf 12 
  |        |  |  |  |     `--leaf 105 
  |        |  |  |  `--[dendrogram w/ 2 branches and 4 members at h = 3.74]
  |        |  |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |        |  |  |     |  |--leaf 35 
  |        |  |  |     |  `--leaf 159 
  |        |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 1]
  |        |  |  |        |--leaf 65 
  |        |  |  |        `--leaf 217 
  |        |  |  `--[dendrogram w/ 2 branches and 8 members at h = 5.28]
  |        |  |     |--[dendrogram w/ 2 branches and 3 members at h = 3.18]
  |        |  |     |  |--leaf 119 
  |        |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 2.45]
  |        |  |     |     |--leaf 113 
  |        |  |     |     `--leaf 219 
  |        |  |     `--[dendrogram w/ 2 branches and 5 members at h = 3.48]
  |        |  |        |--[dendrogram w/ 2 branches and 3 members at h = 1.89]
  |        |  |        |  |--leaf 116 
  |        |  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 0]
  |        |  |        |     |--leaf 37 
  |        |  |        |     `--leaf 161 
  |        |  |        `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |        |  |           |--leaf 56 
  |        |  |           `--leaf 59 
  |        |  `--[dendrogram w/ 2 branches and 9 members at h = 6.74]
  |        |     |--[dendrogram w/ 2 branches and 4 members at h = 3.22]
  |        |     |  |--[dendrogram w/ 2 branches and 2 members at h = 2]
  |        |     |  |  |--leaf 98 
  |        |     |  |  `--leaf 149 
  |        |     |  `--[dendrogram w/ 2 branches and 2 members at h = 2.45]
  |        |     |     |--leaf 70 
  |        |     |     `--leaf 178 
  |        |     `--[dendrogram w/ 2 branches and 5 members at h = 3.43]
  |        |        |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |        |        |  |--leaf 46 
  |        |        |  `--leaf 171 
  |        |        `--[dendrogram w/ 2 branches and 3 members at h = 2.82]
  |        |           |--leaf 76 
  |        |           `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |        |              |--leaf 14 
  |        |              `--leaf 94 
  |        `--[dendrogram w/ 2 branches and 31 members at h = 14]
  |           |--[dendrogram w/ 2 branches and 10 members at h = 6.32]
  |           |  |--[dendrogram w/ 2 branches and 5 members at h = 3.45]
  |           |  |  |--leaf 63 
  |           |  |  `--[dendrogram w/ 2 branches and 4 members at h = 2.68]
  |           |  |     |--[dendrogram w/ 2 branches and 2 members at h = 2]
  |           |  |     |  |--leaf 85 
  |           |  |     |  `--leaf 112 
  |           |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2]
  |           |  |        |--leaf 121 
  |           |  |        `--leaf 187 
  |           |  `--[dendrogram w/ 2 branches and 5 members at h = 3.89]
  |           |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
  |           |     |  |--leaf 66 
  |           |     |  `--leaf 188 
  |           |     `--[dendrogram w/ 2 branches and 3 members at h = 1.91]
  |           |        |--leaf 117 
  |           |        `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
  |           |           |--leaf 8 
  |           |           `--leaf 201 
  |           `--[dendrogram w/ 2 branches and 21 members at h = 11.5]
  |              |--[dendrogram w/ 2 branches and 6 members at h = 4]
  |              |  |--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |              |  |  |--leaf 28 
  |              |  |  `--leaf 130 
  |              |  `--[dendrogram w/ 2 branches and 4 members at h = 3.09]
  |              |     |--leaf 196 
  |              |     `--[dendrogram w/ 2 branches and 3 members at h = 2.79]
  |              |        |--leaf 156 
  |              |        `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
  |              |           |--leaf 48 
  |              |           `--leaf 208 
  |              `--[dendrogram w/ 2 branches and 15 members at h = 8.36]
  |                 |--[dendrogram w/ 2 branches and 7 members at h = 3.85]
  |                 |  |--[dendrogram w/ 2 branches and 2 members at h = 2.45]
  |                 |  |  |--leaf 151 
  |                 |  |  `--leaf 210 
  |                 |  `--[dendrogram w/ 2 branches and 5 members at h = 3.4]
  |                 |     |--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |                 |     |  |--leaf 51 
  |                 |     |  `--leaf 158 
  |                 |     `--[dendrogram w/ 2 branches and 3 members at h = 2.98]
  |                 |        |--leaf 223 
  |                 |        `--[dendrogram w/ 2 branches and 2 members at h = 0]
  |                 |           |--leaf 36 
  |                 |           `--leaf 160 
  |                 `--[dendrogram w/ 2 branches and 8 members at h = 6.23]
  |                    |--[dendrogram w/ 2 branches and 2 members at h = 2.45]
  |                    |  |--leaf 96 
  |                    |  `--leaf 192 
  |                    `--[dendrogram w/ 2 branches and 6 members at h = 3.3]
  |                       |--[dendrogram w/ 2 branches and 3 members at h = 1.28]
  |                       |  |--leaf 221 
  |                       |  `--[dendrogram w/ 2 branches and 2 members at h = 1]
  |                       |     |--leaf 114 
  |                       |     `--leaf 214 
  |                       `--[dendrogram w/ 2 branches and 3 members at h = 2.85]
  |                          |--leaf 126 
  |                          `--[dendrogram w/ 2 branches and 2 members at h = 2]
  |                             |--leaf 74 
  |                             `--leaf 224 
  `--[dendrogram w/ 2 branches and 74 members at h = 40.5]
     |--[dendrogram w/ 2 branches and 33 members at h = 10.8]
     |  |--[dendrogram w/ 2 branches and 8 members at h = 5.61]
     |  |  |--[dendrogram w/ 2 branches and 4 members at h = 2.57]
     |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 1.73]
     |  |  |  |  |--leaf 73 
     |  |  |  |  `--leaf 195 
     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2]
     |  |  |     |--leaf 18 
     |  |  |     `--leaf 82 
     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 4.33]
     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
     |  |     |  |--leaf 16 
     |  |     |  `--leaf 141 
     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
     |  |        |--leaf 90 
     |  |        `--leaf 220 
     |  `--[dendrogram w/ 2 branches and 25 members at h = 7.39]
     |     |--[dendrogram w/ 2 branches and 8 members at h = 6.05]
     |     |  |--[dendrogram w/ 2 branches and 4 members at h = 2.57]
     |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 1.73]
     |     |  |  |  |--leaf 212 
     |     |  |  |  `--leaf 225 
     |     |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2]
     |     |  |     |--leaf 71 
     |     |  |     `--leaf 143 
     |     |  `--[dendrogram w/ 2 branches and 4 members at h = 4.47]
     |     |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
     |     |     |  |--leaf 6 
     |     |     |  `--leaf 132 
     |     |     `--[dendrogram w/ 2 branches and 2 members at h = 0]
     |     |        |--leaf 23 
     |     |        `--leaf 146 
     |     `--[dendrogram w/ 2 branches and 17 members at h = 7.1]
     |        |--[dendrogram w/ 2 branches and 5 members at h = 5.12]
     |        |  |--leaf 77 
     |        |  `--[dendrogram w/ 2 branches and 4 members at h = 3.76]
     |        |     |--[dendrogram w/ 2 branches and 2 members at h = 1.41]
     |        |     |  |--leaf 129 
     |        |     |  `--leaf 199 
     |        |     `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
     |        |        |--leaf 5 
     |        |        `--leaf 228 
     |        `--[dendrogram w/ 2 branches and 12 members at h = 5.65]
     |           |--[dendrogram w/ 2 branches and 4 members at h = 3.46]
     |           |  |--[dendrogram w/ 2 branches and 2 members at h = 0]
     |           |  |  |--leaf 31 
     |           |  |  `--leaf 154 
     |           |  `--[dendrogram w/ 2 branches and 2 members at h = 0]
     |           |     |--leaf 58 
     |           |     `--leaf 182 
     |           `--[dendrogram w/ 2 branches and 8 members at h = 3.99]
     |              |--[dendrogram w/ 2 branches and 4 members at h = 2.48]
     |              |  |--[dendrogram w/ 2 branches and 2 members at h = 1]
     |              |  |  |--leaf 115 
     |              |  |  `--leaf 193 
     |              |  `--[dendrogram w/ 2 branches and 2 members at h = 2]
     |              |     |--leaf 80 
     |              |     `--leaf 120 
     |              `--[dendrogram w/ 2 branches and 4 members at h = 3.34]
     |                 |--leaf 27 
     |                 `--[dendrogram w/ 2 branches and 3 members at h = 1.84]
     |                    |--leaf 89 
     |                    `--[dendrogram w/ 2 branches and 2 members at h = 1.41]
     |                       |--leaf 102 
     |                       `--leaf 118 
     `--[dendrogram w/ 2 branches and 41 members at h = 23]
        |--[dendrogram w/ 2 branches and 20 members at h = 10.1]
        |  |--[dendrogram w/ 2 branches and 12 members at h = 7.48]
        |  |  |--[dendrogram w/ 2 branches and 5 members at h = 4.55]
        |  |  |  |--[dendrogram w/ 2 branches and 2 members at h = 2.45]
        |  |  |  |  |--leaf 1 
        |  |  |  |  `--leaf 97 
        |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 3.35]
        |  |  |     |--leaf 9 
        |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
        |  |  |        |--leaf 55 
        |  |  |        `--leaf 169 
        |  |  `--[dendrogram w/ 2 branches and 7 members at h = 5.08]
        |  |     |--[dendrogram w/ 2 branches and 3 members at h = 2.52]
        |  |     |  |--leaf 184 
        |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
        |  |     |     |--leaf 103 
        |  |     |     `--leaf 209 
        |  |     `--[dendrogram w/ 2 branches and 4 members at h = 3.84]
        |  |        |--leaf 84 
        |  |        `--[dendrogram w/ 2 branches and 3 members at h = 2.82]
        |  |           |--leaf 49 
        |  |           `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
        |  |              |--leaf 32 
        |  |              `--leaf 180 
        |  `--[dendrogram w/ 2 branches and 8 members at h = 7.98]
        |     |--[dendrogram w/ 2 branches and 2 members at h = 0]
        |     |  |--leaf 38 
        |     |  `--leaf 162 
        |     `--[dendrogram w/ 2 branches and 6 members at h = 6.43]
        |        |--[dendrogram w/ 2 branches and 2 members at h = 0]
        |        |  |--leaf 67 
        |        |  `--leaf 189 
        |        `--[dendrogram w/ 2 branches and 4 members at h = 5.29]
        |           |--[dendrogram w/ 2 branches and 2 members at h = 0]
        |           |  |--leaf 17 
        |           |  `--leaf 142 
        |           `--[dendrogram w/ 2 branches and 2 members at h = 0]
        |              |--leaf 47 
        |              `--leaf 172 
        `--[dendrogram w/ 2 branches and 21 members at h = 15.9]
           |--[dendrogram w/ 2 branches and 10 members at h = 10.3]
           |  |--[dendrogram w/ 2 branches and 4 members at h = 4.2]
           |  |  |--[dendrogram w/ 2 branches and 2 members at h = 0]
           |  |  |  |--leaf 88 
           |  |  |  `--leaf 215 
           |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.83]
           |  |     |--leaf 175 
           |  |     `--leaf 227 
           |  `--[dendrogram w/ 2 branches and 6 members at h = 6.65]
           |     |--[dendrogram w/ 2 branches and 2 members at h = 1.73]
           |     |  |--leaf 150 
           |     |  `--leaf 203 
           |     `--[dendrogram w/ 2 branches and 4 members at h = 4.49]
           |        |--leaf 4 
           |        `--[dendrogram w/ 2 branches and 3 members at h = 1.33]
           |           |--leaf 139 
           |           `--[dendrogram w/ 2 branches and 2 members at h = 0]
           |              |--leaf 61 
           |              `--leaf 185 
           `--[dendrogram w/ 2 branches and 11 members at h = 10.4]
              |--[dendrogram w/ 2 branches and 4 members at h = 4.23]
              |  |--[dendrogram w/ 2 branches and 2 members at h = 0]
              |  |  |--leaf 33 
              |  |  `--leaf 157 
              |  `--[dendrogram w/ 2 branches and 2 members at h = 3.46]
              |     |--leaf 40 
              |     `--leaf 198 
              `--[dendrogram w/ 2 branches and 7 members at h = 6.29]
                 |--[dendrogram w/ 2 branches and 3 members at h = 2.98]
                 |  |--leaf 222 
                 |  `--[dendrogram w/ 2 branches and 2 members at h = 0]
                 |     |--leaf 13 
                 |     `--leaf 138 
                 `--[dendrogram w/ 2 branches and 4 members at h = 3.8]
                    |--[dendrogram w/ 2 branches and 2 members at h = 2.24]
                    |  |--leaf 15 
                    |  `--leaf 166 
                    `--[dendrogram w/ 2 branches and 2 members at h = 3]
                       |--leaf 108 
                       `--leaf 200 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/wessaorg/rcomp/tmp/19g9o1335793267.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == TRUE){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == TRUE){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/wessaorg/rcomp/tmp/2op0l1335793268.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == TRUE){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/wessaorg/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/38cb51335793268.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/wessaorg/rcomp/tmp/4ensr1335793268.tab") 
+ }
> 
> try(system("convert tmp/19g9o1335793267.ps tmp/19g9o1335793267.png",intern=TRUE))
character(0)
> try(system("convert tmp/2op0l1335793268.ps tmp/2op0l1335793268.png",intern=TRUE))
convert: unable to open image `tmp/2op0l1335793268.ps': No such file or directory @ blob.c/OpenBlob/2480.
convert: missing an image filename `tmp/2op0l1335793268.png' @ convert.c/ConvertImageCommand/2838.
character(0)
Warning message:
running command 'convert tmp/2op0l1335793268.ps tmp/2op0l1335793268.png' had status 1 
> 
> 
> proc.time()
   user  system elapsed 
  1.701   0.200   1.897