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Type 'q()' to quit R. > x <- c(1200,1400,1210,1260,1320,1320,1310,1260,1340,1180,1330,1390,1130,1340,1140,1290,1260,1280,1330,1270,1300,1150,1410,1250,1030,1320,1160,1300,1190,1310,1290,1320,1300,1230,1330,1220,1010,1290,1170,1240,1260,1260,1310,1360,1250,1170,1360,1140,1030,1260,1210,1190,1230,1350,1300,1340,1270,1220,1400,1120,1000,1260,1260,1150,1240,1360,1350,1280,1320,1210,1370,1060,1040,1260,1210,1200,1200,1290,1400,1280,1280,1220,1350,1000,980,1240,1190,1200,1150,1270,1410,1420,1260,1300,1410,1000,950,1280,1330,1190,1170,1270,1340,1470,1270,1280,1430,980) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 108 > (np <- floor(n / par1)) [1] 9 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 1200 1130 1030 1010 1030 1000 1040 980 950 [2,] 1400 1340 1320 1290 1260 1260 1260 1240 1280 [3,] 1210 1140 1160 1170 1210 1260 1210 1190 1330 [4,] 1260 1290 1300 1240 1190 1150 1200 1200 1190 [5,] 1320 1260 1190 1260 1230 1240 1200 1150 1170 [6,] 1320 1280 1310 1260 1350 1360 1290 1270 1270 [7,] 1310 1330 1290 1310 1300 1350 1400 1410 1340 [8,] 1260 1270 1320 1360 1340 1280 1280 1420 1470 [9,] 1340 1300 1300 1250 1270 1320 1280 1260 1270 [10,] 1180 1150 1230 1170 1220 1210 1220 1300 1280 [11,] 1330 1410 1330 1360 1400 1370 1350 1410 1430 [12,] 1390 1250 1220 1140 1120 1060 1000 1000 980 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 1293.333 1262.500 1250.000 1235.000 1243.333 1238.333 1227.500 1235.833 [9] 1246.667 > arr.sd [1] 71.77406 85.40013 89.34102 99.77247 102.18818 117.22809 114.42544 [8] 145.31835 156.86319 > arr.range [1] 220 280 300 350 370 370 400 440 520 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 1153.5311 -0.8368 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 82.57 -10.93 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 4215.710 -3.088 > postscript(file="/var/wessaorg/rcomp/tmp/182011344875031.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/22d111344875031.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/39u931344875031.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4untf1344875031.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5ik3g1344875031.tab") > > try(system("convert tmp/182011344875031.ps tmp/182011344875031.png",intern=TRUE)) character(0) > try(system("convert tmp/22d111344875031.ps tmp/22d111344875031.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.978 0.208 1.187