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Type 'q()' to quit R. > x <- c(-1,-2,-5,-4,-6,-2,-2,-2,-2,2,1,-8,-1,1,-1,2,2,1,-1,-2,-2,-1,-8,-4,-6,-3,-3,-7,-9,-11,-13,-11,-9,-17,-22,-25,-20,-24,-24,-22,-19,-18,-17,-11,-11,-12,-10,-15,-15,-15,-13,-8,-13,-9,-7,-4,-4,-2,0,-2,-3,1,-2,-1,1,-3,-4,-9,-9,-7,-14,-12) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 6 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 6 6 6 6 6 6 6 6 6 6 6 6 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] -1 -1 -6 -20 -15 -3 NA [2,] -2 1 -3 -24 -15 1 NA [3,] -5 -1 -3 -24 -13 -2 NA [4,] -4 2 -7 -22 -8 -1 NA [5,] -6 2 -9 -19 -13 1 NA [6,] -2 1 -11 -18 -9 -3 NA [7,] -2 -1 -13 -17 -7 -4 NA [8,] -2 -2 -11 -11 -4 -9 NA [9,] -2 -2 -9 -11 -4 -9 NA [10,] 2 -1 -17 -12 -2 -7 NA [11,] 1 -8 -22 -10 0 -14 NA [12,] -8 -4 -25 -15 -2 -12 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/fisher/rcomp/tmp/1olj71355424662.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/28yea1355424662.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/3ukkp1355424662.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/4q8d21355424662.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] -20.0 -24.0 -24 -8.0 -19.0 -18 -17.0 -11.0 -11.0 -17.0 -22 -25 [2,] -15.0 -15.0 -13 -8.0 -13.0 -11 -13.0 -11.0 -9.0 -12.0 -14 -15 [3,] -4.5 -2.5 -4 -5.5 -7.5 -6 -5.5 -6.5 -6.5 -4.5 -9 -10 [4,] -1.0 1.0 -2 -1.0 1.0 -2 -2.0 -2.0 -2.0 -1.0 0 -4 [5,] -1.0 1.0 -1 2.0 2.0 1 -1.0 -2.0 -2.0 2.0 1 -2 $n [1] 6 6 6 6 6 6 6 6 6 6 6 6 $conf [,1] [,2] [,3] [,4] [,5] [,6] [1,] -13.530452 -12.820517 -11.095355 -10.0152261 -16.530452 -11.8052907 [2,] 4.530452 7.820517 3.095355 -0.9847739 1.530452 -0.1947093 [,7] [,8] [,9] [,10] [,11] [,12] [1,] -12.595355 -12.3052907 -11.015226 -11.595355 -18.03045219 -17.095355 [2,] 1.595355 -0.6947093 -1.984774 2.595355 0.03045219 -2.904645 $out [1] -22 $group [1] 4 $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(-20, -15, -4.5, -1, -1, -24, -15, -2.5, 1, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/52ccb1355424662.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] -8.0 -4 -25.0 -24.0 -15.0 -14.0 NA [2,] -4.5 -2 -15.0 -21.0 -13.0 -9.0 NA [3,] -2.0 -1 -10.0 -17.5 -7.5 -3.5 NA [4,] -1.5 1 -6.5 -11.5 -3.0 -1.5 NA [5,] 2.0 2 -3.0 -10.0 0.0 1.0 NA $n [1] 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] -3.3683201 -2.3683201 -13.876907 -21.83301 -12.061067 -6.92080034 NA [2,] -0.6316799 0.3683201 -6.123093 -13.16699 -2.938933 -0.07919966 NA $out [1] -8 $group [1] 2 $names [1] "1" "2" "3" "4" "5" "6" NA Warning message: In bxp(list(stats = c(-8, -4.5, -2, -1.5, 2, -4, -2, -1, 1, 2, -25, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/6bwk71355424662.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 4.324350 16.0 6.000 [2,] 6.711300 17.5 8.125 [3,] 8.053745 20.0 9.125 [4,] 8.535934 23.0 11.125 [5,] 10.217632 25.0 12.250 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 7.221517 17.49141 7.75668 [2,] 8.885973 22.50859 10.49332 $out [1] 3.970726 9.000000 9.000000 $group [1] 1 2 2 $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(4.32434966208793, 6.71129954086948, 8.05374523920646, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/1olj71355424662.ps tmp/1olj71355424662.png",intern=TRUE)) character(0) > try(system("convert tmp/28yea1355424662.ps tmp/28yea1355424662.png",intern=TRUE)) character(0) > try(system("convert tmp/3ukkp1355424662.ps tmp/3ukkp1355424662.png",intern=TRUE)) character(0) > try(system("convert tmp/4q8d21355424662.ps tmp/4q8d21355424662.png",intern=TRUE)) character(0) > try(system("convert tmp/52ccb1355424662.ps tmp/52ccb1355424662.png",intern=TRUE)) character(0) > try(system("convert tmp/6bwk71355424662.ps tmp/6bwk71355424662.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 3.216 0.860 4.096