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Type 'q()' to quit R. > x <- c(68.897,38.683,44.720,39.525,45.315,50.380,40.600,36.279,42.438,38.064,31.879,11.379,70.249,39.253,47.060,41.697,38.708,49.267,39.018,32.228,40.870,39.383,34.571,12.066,70.938,34.077,45.409,40.809,37.013,44.953,37.848,32.745,43.412,34.931,33.008,8.620,68.906,39.556,50.669,36.432,40.891,48.428,36.222,33.425,39.401,37.967,34.801,12.657,69.116,41.519,51.321,38.529,41.547,52.073,38.401,40.898,40.439,41.888,37.898,8.771,68.184,50.530,47.221,41.756,45.633,48.138,39.486,39.341,41.117,41.629,29.722,7.054,56.676,34.870,35.117,30.169,30.936,35.699,33.228,27.733,33.666,35.429,27.438,8.170,63.410,38.040,45.389,37.353,37.024,50.957,37.994,36.454,46.080,43.373,37.395,10.963,76.058,50.179,57.452,47.568,50.050,50.856,41.992,39.284,44.521,43.832,41.153,17.100) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 108 > (np <- floor(n / par1)) [1] 9 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 68.897 70.249 70.938 68.906 69.116 68.184 56.676 63.410 76.058 [2,] 38.683 39.253 34.077 39.556 41.519 50.530 34.870 38.040 50.179 [3,] 44.720 47.060 45.409 50.669 51.321 47.221 35.117 45.389 57.452 [4,] 39.525 41.697 40.809 36.432 38.529 41.756 30.169 37.353 47.568 [5,] 45.315 38.708 37.013 40.891 41.547 45.633 30.936 37.024 50.050 [6,] 50.380 49.267 44.953 48.428 52.073 48.138 35.699 50.957 50.856 [7,] 40.600 39.018 37.848 36.222 38.401 39.486 33.228 37.994 41.992 [8,] 36.279 32.228 32.745 33.425 40.898 39.341 27.733 36.454 39.284 [9,] 42.438 40.870 43.412 39.401 40.439 41.117 33.666 46.080 44.521 [10,] 38.064 39.383 34.931 37.967 41.888 41.629 35.429 43.373 43.832 [11,] 31.879 34.571 33.008 34.801 37.898 29.722 27.438 37.395 41.153 [12,] 11.379 12.066 8.620 12.657 8.771 7.054 8.170 10.963 17.100 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 40.67992 40.36417 38.64692 39.94625 41.86667 41.65092 32.42758 40.36933 [9] 46.67042 > arr.sd [1] 13.13819 13.23400 14.01893 13.04108 13.72954 14.21066 10.72703 12.17325 [9] 13.53750 > arr.range [1] 57.518 58.183 62.318 56.249 60.345 61.130 48.506 52.447 58.958 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 4.8684 0.2041 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 0.05799 0.67999 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 27.359 0.743 > postscript(file="/var/wessaorg/rcomp/tmp/161rv1355433387.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/21gru1355433387.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3ln6u1355433387.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4ge3r1355433387.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5cjv41355433387.tab") > > try(system("convert tmp/161rv1355433387.ps tmp/161rv1355433387.png",intern=TRUE)) character(0) > try(system("convert tmp/21gru1355433387.ps tmp/21gru1355433387.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.347 0.239 1.563