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Type 'q()' to quit R. > x <- c(1855.87,1868.53,1865.71,1872.59,1875.95,1875.95,1875.95,1878.08,1878.26,1876.39,1876.77,1876.88,1876.88,1876.68,1865.52,1858.99,1856.87,1858.22,1858.22,1859.32,1859.52,1852.48,1850.07,1850.07,1850.07,1841.55,1845,1844.01,1842.67,1842.67,1842.67,1842.9,1840.37,1841.59,1844.33,1844.33,1844.33,1845.39,1861.84,1862.85,1869.46,1870.8,1870.8,1871.52,1875.52,1880.38,1885.05,1886.42,1886.42,1891.65,1903.11,1905.29,1904.26,1905.37,1905.37,1905.12,1908.62,1915.08,1916.36,1916.68,1916.24,1922.05,1922.63,1922.47,1920.64,1920.66,1920.66,1921.19,1921.44,1921.73,1921.81,1921.81) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 6 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [1,] 1855.87 1876.88 1850.07 1844.33 1886.42 1916.24 [2,] 1868.53 1876.68 1841.55 1845.39 1891.65 1922.05 [3,] 1865.71 1865.52 1845.00 1861.84 1903.11 1922.63 [4,] 1872.59 1858.99 1844.01 1862.85 1905.29 1922.47 [5,] 1875.95 1856.87 1842.67 1869.46 1904.26 1920.64 [6,] 1875.95 1858.22 1842.67 1870.80 1905.37 1920.66 [7,] 1875.95 1858.22 1842.67 1870.80 1905.37 1920.66 [8,] 1878.08 1859.32 1842.90 1871.52 1905.12 1921.19 [9,] 1878.26 1859.52 1840.37 1875.52 1908.62 1921.44 [10,] 1876.39 1852.48 1841.59 1880.38 1915.08 1921.73 [11,] 1876.77 1850.07 1844.33 1885.05 1916.36 1921.81 [12,] 1876.88 1850.07 1844.33 1886.42 1916.68 1921.81 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 1873.078 1860.237 1843.513 1868.697 1905.277 1921.111 > arr.sd [1] 6.653767 8.865469 2.462904 13.484471 9.081398 1.675114 > arr.range [1] 22.39 26.81 9.70 42.09 30.26 6.39 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 55.26388 -0.02567 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 92.89 -12.09 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 157.2557 -0.0715 > postscript(file="/var/fisher/rcomp/tmp/1ny6j1355486106.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/253pv1355486106.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3qblr1355486106.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4e9gk1355486106.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5awti1355486106.tab") > > try(system("convert tmp/1ny6j1355486106.ps tmp/1ny6j1355486106.png",intern=TRUE)) character(0) > try(system("convert tmp/253pv1355486106.ps tmp/253pv1355486106.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.445 0.478 1.928