R version 2.15.2 (2012-10-26) -- "Trick or Treat"
Copyright (C) 2012 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i686-pc-linux-gnu (32-bit)

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> x <- array(list(11,1,11,1,11,1,12,0,11,1,10,2,9,3,12,0,9,3,9,3,12,0,9,3,12,0,12,0,9,3,11,1,9,3,11,1,11,1,12,0,11,1,12,0,12,0,12,0,12,0,7,5,9,3,12,0,4,8,10,2,12,0,12,0,6,6,12,0,10,2,12,0,9,3,12,0,9,3,12,0,10,2,12,0,11,1,12,0,12,0,11,1,7,5,12,0,12,0,12,0,10,2,8,4,8,4,10,2,12,0,12,0,12,0,12,0,10,2,12,0,9,3,9,3,12,0,12,0,9,3,11,1,11,1,10,2,10,2,12,0,10,2,9,3,9,3,11,1,12,0,11,1,11,1,12,0,12,0,11,1,12,0,10,2,12,0,4,8,11,1,11,1,12,0,11,1,12,0,9,3),dim=c(2,90),dimnames=list(c('Cat','Non-cat'),1:90))
>  y <- array(NA,dim=c(2,90),dimnames=list(c('Cat','Non-cat'),1:90))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par8 = 'TRUE'
> par7 = ''
> par6 = '0.0'
> par5 = 'paired'
> par4 = 'Students T-Test'
> par3 = '2'
> par2 = '1'
> par1 = 'two.sided'
> ylab = 'No. of responses'
> xlab = 'Categorical or Non-categorical'
> main = 'Part 1 Cat vs Non-Cat Responses'
> par2 <- as.numeric(par2)
> par3 <- as.numeric(par3)
> par4 <- as.character(par4)
> par5 <- as.character(par5)
> par6 <- as.numeric(par6)
> if ( par5 == 'unpaired') paired <- FALSE else paired <- TRUE
> x <- t(y)
> postscript(file="/var/fisher/rcomp/tmp/1o5w91355754317.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> (r<-boxplot(x ,xlab=xlab,ylab=ylab,main=main,notch=FALSE,col=2))
$stats
     [,1] [,2]
[1,]    7    0
[2,]   10    0
[3,]   11    1
[4,]   12    2
[5,]   12    5

$n
[1] 90 90

$conf
         [,1]      [,2]
[1,] 10.66691 0.6669068
[2,] 11.33309 1.3330932

$out
[1] 4 6 4 8 6 8

$group
[1] 1 1 1 2 2 2

$names
[1] "Cat"     "Non-cat"

> dev.off()
null device 
          1 
> 
> #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/fisher/rcomp/createtable")
> 
> if( par4 == 'Wilcoxon-Mann_Whitney'){
+ a<-table.start()
+ a <- table.row.start(a)
+ a <- table.element(a,'Wilcoxon Test',3,TRUE)
+ a <- table.row.end(a)
+ a <- table.row.start(a)
+ a <- table.element(a,'',1,TRUE)
+ a <- table.element(a,'Statistic',1,TRUE)
+ a <- table.element(a,'P-value',1,TRUE)
+ a <- table.row.end(a)
+ W <- wilcox.test(x[,par2],x[,par3],alternative=par1, paired = paired)
+ a<-table.row.start(a)
+ a<-table.element(a,'Wilcoxon Test',1,TRUE)
+ a<-table.element(a,W$statistic[[1]])
+ a<-table.element(a,round(W$p.value, digits=5) )
+ a<-table.row.end(a)
+ a<-table.end(a)
+ table.save(a,file="/var/fisher/rcomp/tmp/2uwqo1355754317.tab") 
+ }
> if( par4 == 'Students T-Test')
+ {
+ a<-table.start()
+ a <- table.row.start(a)
+ a <- table.element(a,'Students T-Test',3,TRUE)
+ a <- table.row.end(a)
+ a <- table.row.start(a)
+ a <- table.element(a,'',1,TRUE)
+ a <- table.element(a,'Statistic',1,TRUE)
+ a <- table.element(a,'P-value',1,TRUE)
+ a <- table.row.end(a)
+ T <- t.test(x[,par2],x[,par3],alternative=par1, paired=paired, mu=par6)
+ a<-table.row.start(a)
+ a<-table.element(a,'Students T-Test',1,TRUE)
+ a<-table.element(a,round(T$statistic[[1]], digits=5) )
+ a<-table.element(a,round(T$p.value, digits=5) )
+ a<-table.row.end(a)
+ a<-table.end(a)
+ table.save(a,file="/var/fisher/rcomp/tmp/3ddj01355754317.tab") 
+ }
> 
> try(system("convert tmp/1o5w91355754317.ps tmp/1o5w91355754317.png",intern=TRUE))
character(0)
> 
> 
> proc.time()
   user  system elapsed 
  0.892   0.251   1.120