R version 2.13.0 (2011-04-13)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i486-pc-linux-gnu (32-bit)

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Type 'demo()' for some demos, 'help()' for on-line help, or
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> x <- array(list(77
+ ,182
+ ,77
+ ,180
+ ,68
+ ,177
+ ,70
+ ,175
+ ,76
+ ,170
+ ,76
+ ,165
+ ,76
+ ,167
+ ,77
+ ,165
+ ,69
+ ,186
+ ,73
+ ,180
+ ,71
+ ,178
+ ,71
+ ,175
+ ,65
+ ,171
+ ,64
+ ,170
+ ,70
+ ,175
+ ,75
+ ,174
+ ,92
+ ,187
+ ,101
+ ,185
+ ,76
+ ,197
+ ,75
+ ,200
+ ,119
+ ,180
+ ,124
+ ,178
+ ,65
+ ,175
+ ,66
+ ,173
+ ,66
+ ,173
+ ,70
+ ,170
+ ,101
+ ,183
+ ,100
+ ,180
+ ,75
+ ,178
+ ,73
+ ,175
+ ,79
+ ,173
+ ,76
+ ,173
+ ,64
+ ,176
+ ,65
+ ,175
+ ,69
+ ,174
+ ,69
+ ,171
+ ,88
+ ,178
+ ,86
+ ,175
+ ,65
+ ,187
+ ,67
+ ,188
+ ,80
+ ,178
+ ,80
+ ,178
+ ,78
+ ,183
+ ,80
+ ,180
+ ,85
+ ,179
+ ,82
+ ,175
+ ,82
+ ,182
+ ,85
+ ,183
+ ,74
+ ,169
+ ,73
+ ,170
+ ,102
+ ,185
+ ,107
+ ,185
+ ,64
+ ,177
+ ,NA
+ ,NA
+ ,65
+ ,176
+ ,64
+ ,172
+ ,73
+ ,183
+ ,74
+ ,180
+ ,75
+ ,172
+ ,70
+ ,169
+ ,57
+ ,173
+ ,58
+ ,170
+ ,68
+ ,165
+ ,69
+ ,165
+ ,71
+ ,177
+ ,71
+ ,170
+ ,71
+ ,180
+ ,76
+ ,175
+ ,97
+ ,189
+ ,98
+ ,185
+ ,80
+ ,178
+ ,76
+ ,175
+ ,66
+ ,173
+ ,66
+ ,175
+ ,69
+ ,182
+ ,70
+ ,180
+ ,69
+ ,183
+ ,70
+ ,183
+ ,55
+ ,168
+ ,56
+ ,170
+ ,59
+ ,182
+ ,61
+ ,183
+ ,62
+ ,178
+ ,66
+ ,175
+ ,70
+ ,173
+ ,68
+ ,170
+ ,84
+ ,184
+ ,86
+ ,183
+ ,69
+ ,180
+ ,71
+ ,180
+ ,88
+ ,189
+ ,87
+ ,185
+ ,103
+ ,185
+ ,101
+ ,182
+ ,63
+ ,178
+ ,63
+ ,175
+ ,84
+ ,183
+ ,90
+ ,183
+ ,79
+ ,179
+ ,79
+ ,171
+ ,67
+ ,179
+ ,67
+ ,179
+ ,83
+ ,184
+ ,83
+ ,181
+ ,96
+ ,184
+ ,94
+ ,183
+ ,75
+ ,169
+ ,76
+ ,165
+ ,65
+ ,178
+ ,66
+ ,178
+ ,78
+ ,178
+ ,77
+ ,175
+ ,69
+ ,167
+ ,73
+ ,165
+ ,87
+ ,185
+ ,89
+ ,185
+ ,83
+ ,177
+ ,84
+ ,175
+ ,90
+ ,188
+ ,91
+ ,185
+ ,85
+ ,191
+ ,83
+ ,188
+ ,66
+ ,175
+ ,68
+ ,175
+ ,88
+ ,184
+ ,86
+ ,183
+ ,54
+ ,169
+ ,58
+ ,165
+ ,69
+ ,172
+ ,68
+ ,174
+ ,56
+ ,163
+ ,58
+ ,161
+ ,96
+ ,191
+ ,95
+ ,188
+ ,76
+ ,169
+ ,75
+ ,165
+ ,61
+ ,170
+ ,61
+ ,170
+ ,62
+ ,168
+ ,64
+ ,168
+ ,71
+ ,178
+ ,68
+ ,178
+ ,66
+ ,170
+ ,67
+ ,165
+ ,81
+ ,178
+ ,82
+ ,175
+ ,68
+ ,174
+ ,68
+ ,173
+ ,80
+ ,176
+ ,78
+ ,175
+ ,70
+ ,173
+ ,70
+ ,173
+ ,76
+ ,183
+ ,75
+ ,180
+ ,88
+ ,185
+ ,93
+ ,188
+ ,89
+ ,173
+ ,86
+ ,173
+ ,74
+ ,175
+ ,71
+ ,175
+ ,83
+ ,180
+ ,80
+ ,180
+ ,90
+ ,181
+ ,91
+ ,178
+ ,79
+ ,177
+ ,81
+ ,178)
+ ,dim=c(4
+ ,83)
+ ,dimnames=list(c('weight'
+ ,'height'
+ ,'repwt'
+ ,'repht
')
+ ,1:83))
>  y <- array(NA,dim=c(4,83),dimnames=list(c('weight','height','repwt','repht
'),1:83))
>  for (i in 1:dim(x)[1])
+  {
+  	for (j in 1:dim(x)[2])
+  	{
+  		y[i,j] <- as.numeric(x[i,j])
+  	}
+  }
> par3 = '0'
> par2 = 'TRUE'
> par1 = '3'
> ylab = 'Height and Weight values'
> xlab = 'CARE Variable Names'
> main = 'Males'
> par3 <- '0'
> par2 <- 'TRUE'
> par1 <- '3'
> par1 <- as.numeric(par1) #colour
> par2<- as.logical(par2) # Notches ?
> par3<-as.numeric(par3) # % trim
> if(par3>45){par3<-45;warning('trim limited to 45%')}
> if(par3<0){par3<-0;warning('negative trim makes no sense. Trim is zero.')}
> lotrm<-as.integer(length(y[1,])*par3/100)+1
> hitrm<-as.integer(length(y[1,])*(100-par3)/100)
> y1<-array(dim=c(dim(y)[1], hitrm-lotrm+1), dimnames=list(dimnames(y)[[1]], 1:(hitrm-lotrm+1) ))
> for(i in 1:dim(y)[1]){
+ tmp<-order(y[i,])
+ y1[i,]<- y[i, tmp[lotrm:hitrm] ]
+ }
> postscript(file="/var/wessaorg/rcomp/tmp/1g90d1338544975.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> pairs(t(y))
Warning messages:
1: In strwidth(labels, "user") : font width unknown for character 0xd
2: In text.default(x, y, txt, cex = cex, font = font) :
  font width unknown for character 0xd
3: In text.default(x, y, txt, cex = cex, font = font) :
  font metrics unknown for character 0xd
> dev.off()
null device 
          1 
> y<-y1
> z <- as.data.frame(t(y))
> postscript(file="/var/wessaorg/rcomp/tmp/2ihev1338544975.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> (r<-boxplot(z ,xlab=xlab,ylab=ylab,main=main,notch=par2,col=par1))
$stats
      [,1] [,2] [,3] [,4]
[1,]  54.0  163   56  161
[2,]  67.5  173   68  171
[3,]  75.0  178   75  175
[4,]  83.0  183   83  180
[5,] 103.0  197  101  188

$n
[1] 83 83 82 82

$conf
         [,1]     [,2]     [,3]     [,4]
[1,] 72.31187 176.2657 72.38277 173.4297
[2,] 77.68813 179.7343 77.61723 176.5703

$out
[1] 119 107 124 200

$group
[1] 1 3 3 4

$names
[1] "weight"  "height"  "repwt"   "repht\r"

Warning messages:
1: In axis(side = 1, at = 1:4, labels = c("weight", "height", "repwt",  :
  font width unknown for character 0xd
2: In axis(side = 1, at = 1:4, labels = c("weight", "height", "repwt",  :
  font width unknown for character 0xd
> dev.off()
null device 
          1 
> 
> #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/wessaorg/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,hyperlink('http://www.xycoon.com/overview.htm','Boxplot statistics','Boxplot overview'),6,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Variable',1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/lower_whisker.htm','lower whisker','definition of lower whisker'),1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/lower_hinge.htm','lower hinge','definition of lower hinge'),1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/central_tendency.htm','median','definitions about measures of central tendency'),1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/upper_hinge.htm','upper hinge','definition of upper hinge'),1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/upper_whisker.htm','upper whisker','definition of upper whisker'),1,TRUE)
> a<-table.row.end(a)
> for (i in 1:length(y[,1]))
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE)
+ for (j in 1:5)
+ {
+ a<-table.element(a,signif(r$stats[j,i], digits=4))
+ }
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/3lajr1338544975.tab") 
> if (par2){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Boxplot Notches',4,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Variable',1,TRUE)
+ a<-table.element(a,'lower bound',1,TRUE)
+ a<-table.element(a,'median',1,TRUE)
+ a<-table.element(a,'upper bound',1,TRUE)
+ a<-table.row.end(a)
+ for (i in 1:length(y[,1]))
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE)
+ a<-table.element(a,signif(r$conf[1,i], digits=4))
+ a<-table.element(a, signif(r$stats[3,i], digits=4))
+ a<-table.element(a,signif(r$conf[2,i], digits=4))
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/wessaorg/rcomp/tmp/4wbgc1338544975.tab") 
+ }
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Boxplot Means',4,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Variable',1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/trimmed_mean.htm','trimmed mean','definition of trimmed mean'),1,TRUE)
> a<-table.element(a,hyperlink('http://www.xycoon.com/unbiased1.htm','unbiased SD','definition of unbiased SD'),1,TRUE)
> a<-table.row.end(a)
> for (i in 1:length(y[,1]))
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE)
+ a<-table.element(a,signif(mean(z[i], trim=par3/100, na.rm=TRUE), digits=4))
+ a<-table.element(a,signif(sd(z[i], na.rm=TRUE), digits=4))
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/52vqs1338544975.tab") 
> 
> try(system("convert tmp/1g90d1338544975.ps tmp/1g90d1338544975.png",intern=TRUE))
character(0)
> try(system("convert tmp/2ihev1338544975.ps tmp/2ihev1338544975.png",intern=TRUE))
character(0)
> 
> 
> proc.time()
   user  system elapsed 
  0.909   0.216   1.130