R version 2.13.0 (2011-04-13) Copyright (C) 2011 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: i486-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- array(list(56,49,58,50,58,50,58,50,61,50,61,50,63,51,64,51,64,51,64,51,65,51,66,52,66,52,66,52,66,52,67,52,67,53,67,53,68,53,68,53,68,53,68,54,68,54,69,54,69,54,70,54,70,55,70,55,70,55,70,55,70,55,71,55,71,55,71,55,71,55,73,55,73,55,73,55,73,55,74,56,75,56,75,56,75,56,75,56,76,56,76,56,76,57,76,57,76,57,77,57,77,57,77,58,78,58,79,59,80,59,80,59,80,59,81,59,82,59,82,59,83,59,83,60,84,60,85,61,86,61,86,61,86,61,86,61,87,61,89,62,90,62,91,62,91,62,93,62,94,63,95,63,98,63,100,64,101,64,101,64,107,66,124,66),dim=c(2,82),dimnames=list(c('Mrw','Wrw'),1:82)) > y <- array(NA,dim=c(2,82),dimnames=list(c('Mrw','Wrw'),1:82)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > par8 = 'TRUE' > par7 = '0.95' > par6 = '0.0' > par5 = 'paired' > par4 = 'T-Test' > par3 = '2' > par2 = '1' > par1 = 'greater' > ylab = 'Y-Axis Title' > xlab = 'X-Axis Title' > main = 'Boxplots Title' > par2 <- as.numeric(par2) > par3 <- as.numeric(par3) > par4 <- as.character(par4) > par5 <- as.character(par5) > par6 <- as.numeric(par6) > par7 <- as.numeric(par7) > par8 <- as.logical(par8) > if ( par5 == 'unpaired') paired <- FALSE else paired <- TRUE > x <- t(y) > if(par8){ + postscript(file="/var/wessaorg/rcomp/tmp/1nz7o1338545876.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) + (r<-boxplot(x ,xlab=xlab,ylab=ylab,main=main,notch=FALSE,col=2)) + dev.off() + } null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > if( par4 == 'Wilcoxon-Mann_Whitney'){ + a<-table.start() + a <- table.row.start(a) + a <- table.element(a,'Wilcoxon Test',3,TRUE) + a <- table.row.end(a) + a <- table.row.start(a) + a <- table.element(a,'',1,TRUE) + a <- table.element(a,'Statistic',1,TRUE) + a <- table.element(a,'P-value',1,TRUE) + a <- table.row.end(a) + W <- wilcox.test(x[,par2],x[,par3],alternative=par1, paired = paired) + a<-table.row.start(a) + a<-table.element(a,'Wilcoxon Test',1,TRUE) + a<-table.element(a,W$statistic[[1]]) + a<-table.element(a,round(W$p.value, digits=5) ) + a<-table.row.end(a) + a<-table.end(a) + table.save(a,file="/var/wessaorg/rcomp/tmp/28pxq1338545876.tab") + } > if( par4 == 'T-Test') + { + T <- t.test(x[,par2],x[,par3],alternative=par1, paired=paired, mu=par6, conf.level=par7) + a<-table.start() + a <- table.row.start(a) + a <- table.element(a,'T-Test',3,TRUE) + a <- table.row.end(a) + if(paired){ + a <- table.row.start(a) + a <- table.element(a,'Difference: Mean1 - Mean2',1,TRUE) + a<-table.element(a,round(T$estimate, digits=5) ) + a <- table.row.end(a) + } + if(!paired){ + a <- table.row.start(a) + a <- table.element(a,'Mean1',1,TRUE) + a<-table.element(a,round(T$estimate[1], digits=5) ) + a <- table.row.end(a) + a <- table.row.start(a) + a <- table.element(a,'Mean2',1,TRUE) + a<-table.element(a,round(T$estimate[2], digits=5) ) + a <- table.row.end(a) + } + a <- table.row.start(a) + a <- table.element(a,'T Statistic',1,TRUE) + a<-table.element(a,round(T$statistic, digits=5) ) + a <- table.row.end(a) + a <- table.row.start(a) + a <- table.element(a,'P-value',1,TRUE) + a<-table.element(a,round(T$p.value, digits=5) ) + a <- table.row.end(a) + a <- table.row.start(a) + a <- table.element(a,'Lower Confidence Limit',1,TRUE) + a<-table.element(a,round(T$conf.int[1], digits=5) ) + a <- table.row.end(a) + a<-table.row.start(a) + a <- table.element(a,'Upper Confidence Limit',1,TRUE) + a<-table.element(a,round(T$conf.int[2], digits=5) ) + a <- table.row.end(a) + a<-table.end(a) + table.save(a,file="/var/wessaorg/rcomp/tmp/37qmg1338545876.tab") + } > a<-table.start() > a <- table.row.start(a) > a <- table.element(a,'Standard Deviations',3,TRUE) > a <- table.row.end(a) > a <- table.row.start(a) > a <- table.element(a,'Variable 1',1,TRUE) > a<-table.element(a,round(sd(x[,par2]), digits=5) ) > a <- table.row.end(a) > a <- table.row.start(a) > a <- table.element(a,'Variable 2',1,TRUE) > a<-table.element(a,round(sd(x[,par3]), digits=5) ) > a <- table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/47wpu1338545876.tab") > > try(system("convert tmp/1nz7o1338545876.ps tmp/1nz7o1338545876.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.551 0.138 0.681