R version 2.13.0 (2011-04-13)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i486-pc-linux-gnu (32-bit)

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> par9 = 'cases'
> par8 = 'COLLES preferred'
> par7 = 'all'
> par6 = 'prep'
> par5 = 'male'
> par4 = 'FALSE'
> par3 = 'FALSE'
> par2 = 'ALL'
> par1 = 'ward'
> ylab = 'height'
> xlab = 'cases or variables'
> main = 'Dendrogram'
> par9 <- 'cases'
> par8 <- 'COLLES preferred'
> par7 <- 'all'
> par6 <- 'prep'
> par5 <- 'male'
> par4 <- 'FALSE'
> par3 <- 'FALSE'
> par2 <- 'ALL'
> par1 <- 'ward'
> #'GNU S' R Code compiled by R2WASP v. 1.2.291 ()
> #Author: root
> #To cite this work: Wessa, P., (2012), Hierarchical Clustering (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_hierarchicalclustering.wasp/
> #Source of accompanying publication: Office for Research, Development, and Education
> #
> x <- as.data.frame(read.table(file='http://www.wessa.net/download/utaut.csv',sep=',',header=T))
> x$U25 <- 6-x$U25
> if(par5 == 'female') x <- x[x$Gender==0,]
> if(par5 == 'male') x <- x[x$Gender==1,]
> if(par6 == 'prep') x <- x[x$Pop==1,]
> if(par6 == 'bachelor') x <- x[x$Pop==0,]
> if(par7 != 'all') {
+ x <- x[x$Year==as.numeric(par7),]
+ }
> cAc <- with(x,cbind( A1, A2, A3, A4, A5, A6, A7, A8, A9,A10))
> cAs <- with(x,cbind(A11,A12,A13,A14,A15,A16,A17,A18,A19,A20))
> cA <- cbind(cAc,cAs)
> cCa <- with(x,cbind(C1,C3,C5,C7, C9,C11,C13,C15,C17,C19,C21,C23,C25,C27,C29,C31,C33,C35,C37,C39,C41,C43,C45,C47))
> cCp <- with(x,cbind(C2,C4,C6,C8,C10,C12,C14,C16,C18,C20,C22,C24,C26,C28,C30,C32,C34,C36,C38,C40,C42,C44,C46,C48))
> cC <- cbind(cCa,cCp)
> cU <- with(x,cbind(U1,U2,U3,U4,U5,U6,U7,U8,U9,U10,U11,U12,U13,U14,U15,U16,U17,U18,U19,U20,U21,U22,U23,U24,U25,U26,U27,U28,U29,U30,U31,U32,U33))
> cE <- with(x,cbind(BC,NNZFG,MRT,AFL,LPM,LPC,W,WPA))
> cX <- with(x,cbind(X1,X2,X3,X4,X5,X6,X7,X8,X9,X10,X11,X12,X13,X14,X15,X16,X17,X18))
> if (par8=='ATTLES connected') x <- cAc
> if (par8=='ATTLES separate') x <- cAs
> if (par8=='ATTLES all') x <- cA
> if (par8=='COLLES actuals') x <- cCa
> if (par8=='COLLES preferred') x <- cCp
> if (par8=='COLLES all') x <- cC
> if (par8=='CSUQ') x <- cU
> if (par8=='Learning Activities') x <- cE
> if (par8=='Exam Items') x <- cX
> ncol <- length(x[1,])
> for (jjj in 1:ncol) {
+ x <- x[!is.na(x[,jjj]),]
+ }
> par3 <- as.logical(par3)
> par4 <- as.logical(par4)
> if (par3 == TRUE){
+ dum = xlab
+ xlab = ylab
+ ylab = dum
+ }
> if (par9=='variables') {
+ x <- t(x)
+ } else {
+ ncol <- length(x[1,])
+ colnames(x) <- 1:ncol
+ }
> hc <- hclust(dist(x),method=par1)
> d <- as.dendrogram(hc)
> str(d)
--[dendrogram w/ 2 branches and 240 members at h = 107]
  |--[dendrogram w/ 2 branches and 55 members at h = 17.3]
  |  |--[dendrogram w/ 2 branches and 26 members at h = 10.2]
  |  |  |--[dendrogram w/ 2 branches and 8 members at h = 6.61]
  |  |  |  |--[dendrogram w/ 2 branches and 4 members at h = 5.3]
  |  |  |  |  |--leaf 85 
  |  |  |  |  `--[dendrogram w/ 2 branches and 3 members at h = 3.43]
  |  |  |  |     |--leaf 96 
  |  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.65]
  |  |  |  |        |--leaf 10 
  |  |  |  |        `--leaf 16 
  |  |  |  `--[dendrogram w/ 2 branches and 4 members at h = 5.45]
  |  |  |     |--leaf 230 
  |  |  |     `--[dendrogram w/ 2 branches and 3 members at h = 3.78]
  |  |  |        |--leaf 77 
  |  |  |        `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
  |  |  |           |--leaf 33 
  |  |  |           `--leaf 59 
  |  |  `--[dendrogram w/ 2 branches and 18 members at h = 7.69]
  |  |     |--[dendrogram w/ 2 branches and 12 members at h = 6.23]
  |  |     |  |--[dendrogram w/ 2 branches and 5 members at h = 5.64]
  |  |     |  |  |--[dendrogram w/ 2 branches and 2 members at h = 3.61]
  |  |     |  |  |  |--leaf 137 
  |  |     |  |  |  `--leaf 140 
  |  |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 4.2]
  |  |     |  |     |--leaf 89 
  |  |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.61]
  |  |     |  |        |--leaf 95 
  |  |     |  |        `--leaf 181 
  |  |     |  `--[dendrogram w/ 2 branches and 7 members at h = 5.81]
  |  |     |     |--[dendrogram w/ 2 branches and 2 members at h = 4.47]
  |  |     |     |  |--leaf 116 
  |  |     |     |  `--leaf 186 
  |  |     |     `--[dendrogram w/ 2 branches and 5 members at h = 4.62]
  |  |     |        |--[dendrogram w/ 2 branches and 3 members at h = 2.49]
  |  |     |        |  |--leaf 68 
  |  |     |        |  `--[dendrogram w/ 2 branches and 2 members at h = 1]
  |  |     |        |     |--leaf 101 
  |  |     |        |     `--leaf 224 
  |  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 3]
  |  |     |           |--leaf 20 
  |  |     |           `--leaf 32 
  |  |     `--[dendrogram w/ 2 branches and 6 members at h = 7.06]
  |  |        |--leaf 57 
  |  |        `--[dendrogram w/ 2 branches and 5 members at h = 5.86]
  |  |           |--leaf 36 
  |  |           `--[dendrogram w/ 2 branches and 4 members at h = 4.53]
  |  |              |--[dendrogram w/ 2 branches and 2 members at h = 3.16]
  |  |              |  |--leaf 7 
  |  |              |  `--leaf 235 
  |  |              `--[dendrogram w/ 2 branches and 2 members at h = 4]
  |  |                 |--leaf 51 
  |  |                 `--leaf 81 
  |  `--[dendrogram w/ 2 branches and 29 members at h = 13.2]
  |     |--[dendrogram w/ 2 branches and 2 members at h = 6.93]
  |     |  |--leaf 66 
  |     |  `--leaf 105 
  |     `--[dendrogram w/ 2 branches and 27 members at h = 12.4]
  |        |--leaf 183 
  |        `--[dendrogram w/ 2 branches and 26 members at h = 11.3]
  |           |--[dendrogram w/ 2 branches and 12 members at h = 8.09]
  |           |  |--[dendrogram w/ 2 branches and 5 members at h = 5.96]
  |           |  |  |--[dendrogram w/ 2 branches and 3 members at h = 4.4]
  |           |  |  |  |--leaf 146 
  |           |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 4.24]
  |           |  |  |     |--leaf 35 
  |           |  |  |     `--leaf 99 
  |           |  |  `--[dendrogram w/ 2 branches and 2 members at h = 4.9]
  |           |  |     |--leaf 25 
  |           |  |     `--leaf 144 
  |           |  `--[dendrogram w/ 2 branches and 7 members at h = 6.55]
  |           |     |--[dendrogram w/ 2 branches and 2 members at h = 3.61]
  |           |     |  |--leaf 22 
  |           |     |  `--leaf 98 
  |           |     `--[dendrogram w/ 2 branches and 5 members at h = 5.57]
  |           |        |--[dendrogram w/ 2 branches and 2 members at h = 3.87]
  |           |        |  |--leaf 75 
  |           |        |  `--leaf 93 
  |           |        `--[dendrogram w/ 2 branches and 3 members at h = 4.65]
  |           |           |--leaf 38 
  |           |           `--[dendrogram w/ 2 branches and 2 members at h = 3.61]
  |           |              |--leaf 23 
  |           |              `--leaf 179 
  |           `--[dendrogram w/ 2 branches and 14 members at h = 8.58]
  |              |--[dendrogram w/ 2 branches and 3 members at h = 5.21]
  |              |  |--leaf 70 
  |              |  `--[dendrogram w/ 2 branches and 2 members at h = 4.58]
  |              |     |--leaf 12 
  |              |     `--leaf 78 
  |              `--[dendrogram w/ 2 branches and 11 members at h = 7.68]
  |                 |--[dendrogram w/ 2 branches and 5 members at h = 6.22]
  |                 |  |--leaf 134 
  |                 |  `--[dendrogram w/ 2 branches and 4 members at h = 4.67]
  |                 |     |--[dendrogram w/ 2 branches and 2 members at h = 3.46]
  |                 |     |  |--leaf 6 
  |                 |     |  `--leaf 29 
  |                 |     `--[dendrogram w/ 2 branches and 2 members at h = 3.87]
  |                 |        |--leaf 11 
  |                 |        `--leaf 114 
  |                 `--[dendrogram w/ 2 branches and 6 members at h = 6.54]
  |                    |--leaf 155 
  |                    `--[dendrogram w/ 2 branches and 5 members at h = 4.96]
  |                       |--[dendrogram w/ 2 branches and 2 members at h = 3.32]
  |                       |  |--leaf 174 
  |                       |  `--leaf 192 
  |                       `--[dendrogram w/ 2 branches and 3 members at h = 4.28]
  |                          |--leaf 120 
  |                          `--[dendrogram w/ 2 branches and 2 members at h = 3.32]
  |                             |--leaf 4 
  |                             `--leaf 9 
  `--[dendrogram w/ 2 branches and 185 members at h = 72]
     |--[dendrogram w/ 2 branches and 42 members at h = 14.3]
     |  |--[dendrogram w/ 2 branches and 7 members at h = 4.95]
     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 2.85]
     |  |  |  |--leaf 148 
     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2]
     |  |  |     |--leaf 198 
     |  |  |     `--leaf 240 
     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 4.25]
     |  |     |--leaf 122 
     |  |     `--[dendrogram w/ 2 branches and 3 members at h = 2.7]
     |  |        |--leaf 157 
     |  |        `--[dendrogram w/ 2 branches and 2 members at h = 2.45]
     |  |           |--leaf 90 
     |  |           `--leaf 176 
     |  `--[dendrogram w/ 2 branches and 35 members at h = 9.88]
     |     |--[dendrogram w/ 2 branches and 10 members at h = 7.5]
     |     |  |--[dendrogram w/ 2 branches and 7 members at h = 4.91]
     |     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 3.59]
     |     |  |  |  |--leaf 191 
     |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.65]
     |     |  |  |     |--leaf 215 
     |     |  |  |     `--leaf 238 
     |     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 4.56]
     |     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 3.32]
     |     |  |     |  |--leaf 84 
     |     |  |     |  `--leaf 212 
     |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.74]
     |     |  |        |--leaf 125 
     |     |  |        `--leaf 216 
     |     |  `--[dendrogram w/ 2 branches and 3 members at h = 5.89]
     |     |     |--leaf 168 
     |     |     `--[dendrogram w/ 2 branches and 2 members at h = 4.24]
     |     |        |--leaf 159 
     |     |        `--leaf 194 
     |     `--[dendrogram w/ 2 branches and 25 members at h = 8.56]
     |        |--[dendrogram w/ 2 branches and 11 members at h = 5.98]
     |        |  |--[dendrogram w/ 2 branches and 4 members at h = 3.98]
     |        |  |  |--leaf 161 
     |        |  |  `--[dendrogram w/ 2 branches and 3 members at h = 3.32]
     |        |  |     |--leaf 199 
     |        |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3]
     |        |  |        |--leaf 115 
     |        |  |        `--leaf 197 
     |        |  `--[dendrogram w/ 2 branches and 7 members at h = 4.63]
     |        |     |--[dendrogram w/ 2 branches and 2 members at h = 2.83]
     |        |     |  |--leaf 49 
     |        |     |  `--leaf 219 
     |        |     `--[dendrogram w/ 2 branches and 5 members at h = 3.45]
     |        |        |--[dendrogram w/ 2 branches and 2 members at h = 2]
     |        |        |  |--leaf 150 
     |        |        |  `--leaf 166 
     |        |        `--[dendrogram w/ 2 branches and 3 members at h = 2.65]
     |        |           |--leaf 130 
     |        |           `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
     |        |              |--leaf 178 
     |        |              `--leaf 205 
     |        `--[dendrogram w/ 2 branches and 14 members at h = 6.95]
     |           |--[dendrogram w/ 2 branches and 9 members at h = 4.75]
     |           |  |--[dendrogram w/ 2 branches and 2 members at h = 3]
     |           |  |  |--leaf 47 
     |           |  |  `--leaf 133 
     |           |  `--[dendrogram w/ 2 branches and 7 members at h = 3.58]
     |           |     |--[dendrogram w/ 2 branches and 3 members at h = 2.9]
     |           |     |  |--leaf 163 
     |           |     |  `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
     |           |     |     |--leaf 87 
     |           |     |     `--leaf 156 
     |           |     `--[dendrogram w/ 2 branches and 4 members at h = 2.93]
     |           |        |--leaf 232 
     |           |        `--[dendrogram w/ 2 branches and 3 members at h = 2.65]
     |           |           |--leaf 151 
     |           |           `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
     |           |              |--leaf 193 
     |           |              `--leaf 233 
     |           `--[dendrogram w/ 2 branches and 5 members at h = 5.11]
     |              |--[dendrogram w/ 2 branches and 2 members at h = 4]
     |              |  |--leaf 229 
     |              |  `--leaf 231 
     |              `--[dendrogram w/ 2 branches and 3 members at h = 4.29]
     |                 |--leaf 160 
     |                 `--[dendrogram w/ 2 branches and 2 members at h = 3.32]
     |                    |--leaf 164 
     |                    `--leaf 227 
     `--[dendrogram w/ 2 branches and 143 members at h = 32.7]
        |--[dendrogram w/ 2 branches and 55 members at h = 16.6]
        |  |--[dendrogram w/ 2 branches and 27 members at h = 9.15]
        |  |  |--[dendrogram w/ 2 branches and 14 members at h = 6.15]
        |  |  |  |--[dendrogram w/ 2 branches and 6 members at h = 2.62]
        |  |  |  |  |--leaf 180 
        |  |  |  |  `--[dendrogram w/ 2 branches and 5 members at h = 2.36]
        |  |  |  |     |--leaf 236 
        |  |  |  |     `--[dendrogram w/ 2 branches and 4 members at h = 1.87]
        |  |  |  |        |--leaf 73 
        |  |  |  |        `--[dendrogram w/ 2 branches and 3 members at h = 1.28]
        |  |  |  |           |--leaf 220 
        |  |  |  |           `--[dendrogram w/ 2 branches and 2 members at h = 1]
        |  |  |  |              |--leaf 80 
        |  |  |  |              `--leaf 88 
        |  |  |  `--[dendrogram w/ 2 branches and 8 members at h = 5.24]
        |  |  |     |--[dendrogram w/ 2 branches and 4 members at h = 3.69]
        |  |  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 2.24]
        |  |  |     |  |  |--leaf 56 
        |  |  |     |  |  `--leaf 177 
        |  |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 3]
        |  |  |     |     |--leaf 103 
        |  |  |     |     `--leaf 204 
        |  |  |     `--[dendrogram w/ 2 branches and 4 members at h = 4.44]
        |  |  |        |--leaf 132 
        |  |  |        `--[dendrogram w/ 2 branches and 3 members at h = 3.83]
        |  |  |           |--leaf 58 
        |  |  |           `--[dendrogram w/ 2 branches and 2 members at h = 2.65]
        |  |  |              |--leaf 2 
        |  |  |              `--leaf 62 
        |  |  `--[dendrogram w/ 2 branches and 13 members at h = 6.49]
        |  |     |--[dendrogram w/ 2 branches and 4 members at h = 4.91]
        |  |     |  |--leaf 48 
        |  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 4.28]
        |  |     |     |--leaf 187 
        |  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 3.32]
        |  |     |        |--leaf 94 
        |  |     |        `--leaf 189 
        |  |     `--[dendrogram w/ 2 branches and 9 members at h = 5.42]
        |  |        |--leaf 45 
        |  |        `--[dendrogram w/ 2 branches and 8 members at h = 5.09]
        |  |           |--[dendrogram w/ 2 branches and 3 members at h = 4.53]
        |  |           |  |--leaf 72 
        |  |           |  `--[dendrogram w/ 2 branches and 2 members at h = 3.74]
        |  |           |     |--leaf 218 
        |  |           |     `--leaf 234 
        |  |           `--[dendrogram w/ 2 branches and 5 members at h = 4.54]
        |  |              |--leaf 188 
        |  |              `--[dendrogram w/ 2 branches and 4 members at h = 3.97]
        |  |                 |--leaf 222 
        |  |                 `--[dendrogram w/ 2 branches and 3 members at h = 3.33]
        |  |                    |--leaf 52 
        |  |                    `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
        |  |                       |--leaf 92 
        |  |                       `--leaf 173 
        |  `--[dendrogram w/ 2 branches and 28 members at h = 11.3]
        |     |--[dendrogram w/ 2 branches and 15 members at h = 7.8]
        |     |  |--[dendrogram w/ 2 branches and 5 members at h = 5.52]
        |     |  |  |--leaf 14 
        |     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 4.18]
        |     |  |     |--[dendrogram w/ 2 branches and 2 members at h = 3]
        |     |  |     |  |--leaf 21 
        |     |  |     |  `--leaf 50 
        |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.61]
        |     |  |        |--leaf 42 
        |     |  |        `--leaf 226 
        |     |  `--[dendrogram w/ 2 branches and 10 members at h = 6.98]
        |     |     |--[dendrogram w/ 2 branches and 2 members at h = 4.12]
        |     |     |  |--leaf 91 
        |     |     |  `--leaf 109 
        |     |     `--[dendrogram w/ 2 branches and 8 members at h = 5.1]
        |     |        |--[dendrogram w/ 2 branches and 3 members at h = 4.11]
        |     |        |  |--leaf 200 
        |     |        |  `--[dendrogram w/ 2 branches and 2 members at h = 3.16]
        |     |        |     |--leaf 175 
        |     |        |     `--leaf 211 
        |     |        `--[dendrogram w/ 2 branches and 5 members at h = 4.38]
        |     |           |--leaf 17 
        |     |           `--[dendrogram w/ 2 branches and 4 members at h = 3.16]
        |     |              |--leaf 143 
        |     |              `--[dendrogram w/ 2 branches and 3 members at h = 2.55]
        |     |                 |--leaf 86 
        |     |                 `--[dendrogram w/ 2 branches and 2 members at h = 1.73]
        |     |                    |--leaf 111 
        |     |                    `--leaf 149 
        |     `--[dendrogram w/ 2 branches and 13 members at h = 10.6]
        |        |--[dendrogram w/ 2 branches and 2 members at h = 4.47]
        |        |  |--leaf 207 
        |        |  `--leaf 237 
        |        `--[dendrogram w/ 2 branches and 11 members at h = 7.85]
        |           |--[dendrogram w/ 2 branches and 6 members at h = 4.96]
        |           |  |--[dendrogram w/ 2 branches and 2 members at h = 3.74]
        |           |  |  |--leaf 74 
        |           |  |  `--leaf 202 
        |           |  `--[dendrogram w/ 2 branches and 4 members at h = 4.23]
        |           |     |--leaf 41 
        |           |     `--[dendrogram w/ 2 branches and 3 members at h = 3.13]
        |           |        |--leaf 129 
        |           |        `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
        |           |           |--leaf 19 
        |           |           `--leaf 82 
        |           `--[dendrogram w/ 2 branches and 5 members at h = 5.73]
        |              |--[dendrogram w/ 2 branches and 2 members at h = 3.46]
        |              |  |--leaf 136 
        |              |  `--leaf 162 
        |              `--[dendrogram w/ 2 branches and 3 members at h = 4.58]
        |                 |--leaf 190 
        |                 `--[dendrogram w/ 2 branches and 2 members at h = 4.36]
        |                    |--leaf 13 
        |                    `--leaf 121 
        `--[dendrogram w/ 2 branches and 88 members at h = 24]
           |--[dendrogram w/ 2 branches and 62 members at h = 15.4]
           |  |--[dendrogram w/ 2 branches and 38 members at h = 10.6]
           |  |  |--[dendrogram w/ 2 branches and 20 members at h = 8.31]
           |  |  |  |--[dendrogram w/ 2 branches and 9 members at h = 4.9]
           |  |  |  |  |--[dendrogram w/ 2 branches and 3 members at h = 2.95]
           |  |  |  |  |  |--leaf 153 
           |  |  |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.45]
           |  |  |  |  |     |--leaf 65 
           |  |  |  |  |     `--leaf 210 
           |  |  |  |  `--[dendrogram w/ 2 branches and 6 members at h = 4.08]
           |  |  |  |     |--[dendrogram w/ 2 branches and 4 members at h = 3.6]
           |  |  |  |     |  |--leaf 126 
           |  |  |  |     |  `--[dendrogram w/ 2 branches and 3 members at h = 2.85]
           |  |  |  |     |     |--leaf 196 
           |  |  |  |     |     `--[dendrogram w/ 2 branches and 2 members at h = 2]
           |  |  |  |     |        |--leaf 37 
           |  |  |  |     |        `--leaf 53 
           |  |  |  |     `--[dendrogram w/ 2 branches and 2 members at h = 3.74]
           |  |  |  |        |--leaf 60 
           |  |  |  |        `--leaf 165 
           |  |  |  `--[dendrogram w/ 2 branches and 11 members at h = 6.18]
           |  |  |     |--[dendrogram w/ 2 branches and 5 members at h = 4.54]
           |  |  |     |  |--leaf 128 
           |  |  |     |  `--[dendrogram w/ 2 branches and 4 members at h = 3.46]
           |  |  |     |     |--leaf 112 
           |  |  |     |     `--[dendrogram w/ 2 branches and 3 members at h = 2.89]
           |  |  |     |        |--leaf 124 
           |  |  |     |        `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
           |  |  |     |           |--leaf 30 
           |  |  |     |           `--leaf 40 
           |  |  |     `--[dendrogram w/ 2 branches and 6 members at h = 4.98]
           |  |  |        |--[dendrogram w/ 2 branches and 3 members at h = 3.06]
           |  |  |        |  |--leaf 43 
           |  |  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 2.83]
           |  |  |        |     |--leaf 55 
           |  |  |        |     `--leaf 208 
           |  |  |        `--[dendrogram w/ 2 branches and 3 members at h = 4.22]
           |  |  |           |--leaf 228 
           |  |  |           `--[dendrogram w/ 2 branches and 2 members at h = 2.83]
           |  |  |              |--leaf 15 
           |  |  |              `--leaf 106 
           |  |  `--[dendrogram w/ 2 branches and 18 members at h = 9.04]
           |  |     |--[dendrogram w/ 2 branches and 4 members at h = 6.72]
           |  |     |  |--[dendrogram w/ 2 branches and 2 members at h = 3.46]
           |  |     |  |  |--leaf 8 
           |  |     |  |  `--leaf 145 
           |  |     |  `--[dendrogram w/ 2 branches and 2 members at h = 4.9]
           |  |     |     |--leaf 3 
           |  |     |     `--leaf 113 
           |  |     `--[dendrogram w/ 2 branches and 14 members at h = 8.05]
           |  |        |--[dendrogram w/ 2 branches and 3 members at h = 5.39]
           |  |        |  |--leaf 27 
           |  |        |  `--[dendrogram w/ 2 branches and 2 members at h = 4.8]
           |  |        |     |--leaf 44 
           |  |        |     `--leaf 61 
           |  |        `--[dendrogram w/ 2 branches and 11 members at h = 6.11]
           |  |           |--leaf 1 
           |  |           `--[dendrogram w/ 2 branches and 10 members at h = 5.15]
           |  |              |--[dendrogram w/ 2 branches and 5 members at h = 3.85]
           |  |              |  |--[dendrogram w/ 2 branches and 2 members at h = 2.24]
           |  |              |  |  |--leaf 63 
           |  |              |  |  `--leaf 209 
           |  |              |  `--[dendrogram w/ 2 branches and 3 members at h = 3.41]
           |  |              |     |--leaf 225 
           |  |              |     `--[dendrogram w/ 2 branches and 2 members at h = 3.32]
           |  |              |        |--leaf 102 
           |  |              |        `--leaf 141 
           |  |              `--[dendrogram w/ 2 branches and 5 members at h = 4.91]
           |  |                 |--[dendrogram w/ 2 branches and 2 members at h = 3.16]
           |  |                 |  |--leaf 97 
           |  |                 |  `--leaf 172 
           |  |                 `--[dendrogram w/ 2 branches and 3 members at h = 3.71]
           |  |                    |--leaf 31 
           |  |                    `--[dendrogram w/ 2 branches and 2 members at h = 3]
           |  |                       |--leaf 100 
           |  |                       `--leaf 119 
           |  `--[dendrogram w/ 2 branches and 24 members at h = 11.5]
           |     |--[dendrogram w/ 2 branches and 17 members at h = 7.04]
           |     |  |--[dendrogram w/ 2 branches and 7 members at h = 6.63]
           |     |  |  |--[dendrogram w/ 2 branches and 3 members at h = 4.51]
           |     |  |  |  |--leaf 108 
           |     |  |  |  `--[dendrogram w/ 2 branches and 2 members at h = 2.45]
           |     |  |  |     |--leaf 71 
           |     |  |  |     `--leaf 154 
           |     |  |  `--[dendrogram w/ 2 branches and 4 members at h = 4.75]
           |     |  |     |--leaf 110 
           |     |  |     `--[dendrogram w/ 2 branches and 3 members at h = 3.97]
           |     |  |        |--leaf 142 
           |     |  |        `--[dendrogram w/ 2 branches and 2 members at h = 3.32]
           |     |  |           |--leaf 104 
           |     |  |           `--leaf 147 
           |     |  `--[dendrogram w/ 2 branches and 10 members at h = 6.92]
           |     |     |--[dendrogram w/ 2 branches and 6 members at h = 3.88]
           |     |     |  |--[dendrogram w/ 2 branches and 4 members at h = 3.3]
           |     |     |  |  |--leaf 152 
           |     |     |  |  `--[dendrogram w/ 2 branches and 3 members at h = 2.9]
           |     |     |  |     |--leaf 158 
           |     |     |  |     `--[dendrogram w/ 2 branches and 2 members at h = 2.24]
           |     |     |  |        |--leaf 64 
           |     |     |  |        `--leaf 201 
           |     |     |  `--[dendrogram w/ 2 branches and 2 members at h = 3.46]
           |     |     |     |--leaf 169 
           |     |     |     `--leaf 203 
           |     |     `--[dendrogram w/ 2 branches and 4 members at h = 5.43]
           |     |        |--[dendrogram w/ 2 branches and 2 members at h = 3.87]
           |     |        |  |--leaf 185 
           |     |        |  `--leaf 195 
           |     |        `--[dendrogram w/ 2 branches and 2 members at h = 4]
           |     |           |--leaf 117 
           |     |           `--leaf 239 
           |     `--[dendrogram w/ 2 branches and 7 members at h = 9.74]
           |        |--[dendrogram w/ 2 branches and 3 members at h = 4.33]
           |        |  |--leaf 69 
           |        |  `--[dendrogram w/ 2 branches and 2 members at h = 3.46]
           |        |     |--leaf 28 
           |        |     `--leaf 123 
           |        `--[dendrogram w/ 2 branches and 4 members at h = 6.23]
           |           |--leaf 214 
           |           `--[dendrogram w/ 2 branches and 3 members at h = 5.56]
           |              |--leaf 170 
           |              `--[dendrogram w/ 2 branches and 2 members at h = 4.47]
           |                 |--leaf 67 
           |                 `--leaf 184 
           `--[dendrogram w/ 2 branches and 26 members at h = 17.4]
              |--[dendrogram w/ 2 branches and 15 members at h = 10.5]
              |  |--[dendrogram w/ 2 branches and 8 members at h = 7.42]
              |  |  |--[dendrogram w/ 2 branches and 2 members at h = 5.1]
              |  |  |  |--leaf 24 
              |  |  |  `--leaf 167 
              |  |  `--[dendrogram w/ 2 branches and 6 members at h = 5.54]
              |  |     |--[dendrogram w/ 2 branches and 2 members at h = 3.87]
              |  |     |  |--leaf 107 
              |  |     |  `--leaf 213 
              |  |     `--[dendrogram w/ 2 branches and 4 members at h = 5.13]
              |  |        |--leaf 131 
              |  |        `--[dendrogram w/ 2 branches and 3 members at h = 4.12]
              |  |           |--leaf 139 
              |  |           `--[dendrogram w/ 2 branches and 2 members at h = 3.87]
              |  |              |--leaf 83 
              |  |              `--leaf 138 
              |  `--[dendrogram w/ 2 branches and 7 members at h = 7.84]
              |     |--[dendrogram w/ 2 branches and 3 members at h = 4.83]
              |     |  |--leaf 26 
              |     |  `--[dendrogram w/ 2 branches and 2 members at h = 3.74]
              |     |     |--leaf 18 
              |     |     `--leaf 76 
              |     `--[dendrogram w/ 2 branches and 4 members at h = 5.57]
              |        |--leaf 223 
              |        `--[dendrogram w/ 2 branches and 3 members at h = 3.65]
              |           |--leaf 79 
              |           `--[dendrogram w/ 2 branches and 2 members at h = 3.46]
              |              |--leaf 5 
              |              `--leaf 34 
              `--[dendrogram w/ 2 branches and 11 members at h = 12.3]
                 |--[dendrogram w/ 2 branches and 6 members at h = 7.19]
                 |  |--leaf 217 
                 |  `--[dendrogram w/ 2 branches and 5 members at h = 6.41]
                 |     |--leaf 127 
                 |     `--[dendrogram w/ 2 branches and 4 members at h = 4.62]
                 |        |--leaf 206 
                 |        `--[dendrogram w/ 2 branches and 3 members at h = 3.61]
                 |           |--leaf 46 
                 |           `--[dendrogram w/ 2 branches and 2 members at h = 3.32]
                 |              |--leaf 39 
                 |              `--leaf 54 
                 `--[dendrogram w/ 2 branches and 5 members at h = 7.48]
                    |--leaf 171 
                    `--[dendrogram w/ 2 branches and 4 members at h = 6.6]
                       |--leaf 182 
                       `--[dendrogram w/ 2 branches and 3 members at h = 4.97]
                          |--leaf 221 
                          `--[dendrogram w/ 2 branches and 2 members at h = 4.69]
                             |--leaf 118 
                             `--leaf 135 
> mysub <- paste('Method: ',par1)
> postscript(file="/var/wessaorg/rcomp/tmp/1ayxq1335880266.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> if (par4 == TRUE){
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
> dev.off()
null device 
          1 
> if (par2 != 'ALL'){
+ if (par3 == TRUE){
+ ylab = 'cluster'
+ } else {
+ xlab = 'cluster'
+ }
+ par2 <- as.numeric(par2)
+ memb <- cutree(hc, k = par2)
+ cent <- NULL
+ for(k in 1:par2){
+ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
+ }
+ hc1 <- hclust(dist(cent),method=par1, members = table(memb))
+ de <- as.dendrogram(hc1)
+ postscript(file="/var/wessaorg/rcomp/tmp/29js11335880266.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
+ if (par4 == TRUE){
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
+ } else {
+ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
+ }
+ dev.off()
+ str(de)
+ }
> 
> #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/wessaorg/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Summary of Dendrogram',2,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Label',header=TRUE)
> a<-table.element(a,'Height',header=TRUE)
> a<-table.row.end(a)
> num <- length(x[,1])-1
> for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,hc$labels[i])
+ a<-table.element(a,hc$height[i])
+ a<-table.row.end(a)
+ }
> a<-table.end(a)
> table.save(a,file="/var/wessaorg/rcomp/tmp/31p5t1335880266.tab") 
> if (par2 != 'ALL'){
+ a<-table.start()
+ a<-table.row.start(a)
+ a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
+ a<-table.row.end(a)
+ a<-table.row.start(a)
+ a<-table.element(a,'Label',header=TRUE)
+ a<-table.element(a,'Height',header=TRUE)
+ a<-table.row.end(a)
+ num <- par2-1
+ for (i in 1:num)
+ {
+ a<-table.row.start(a)
+ a<-table.element(a,i)
+ a<-table.element(a,hc1$height[i])
+ a<-table.row.end(a)
+ }
+ a<-table.end(a)
+ table.save(a,file="/var/wessaorg/rcomp/tmp/4aufo1335880266.tab") 
+ }
> 
> try(system("convert tmp/1ayxq1335880266.ps tmp/1ayxq1335880266.png",intern=TRUE))
character(0)
> try(system("convert tmp/29js11335880266.ps tmp/29js11335880266.png",intern=TRUE))
convert: unable to open image `tmp/29js11335880266.ps': No such file or directory @ blob.c/OpenBlob/2480.
convert: missing an image filename `tmp/29js11335880266.png' @ convert.c/ConvertImageCommand/2838.
character(0)
Warning message:
running command 'convert tmp/29js11335880266.ps tmp/29js11335880266.png' had status 1 
> 
> 
> proc.time()
   user  system elapsed 
  1.986   0.180   2.159