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Type 'q()' to quit R. > x <- c(86.9,85.8,84.4,80.4,84.4,90.7,91.6,91.9,92.5,92.5,92,92,94.5,95.5,96.3,100,103.1,109.2,108.7,107.5,104.5,103.8,102.5,100.8,100.7,102.7,106.5,105.5,110.1,110.1,109,106.9,108,106.1,101.7,100.6,102.6,100.5,105.2,104.3,104.1,104.8,105.2,102.7,101,93.9,90.2,92.4,94.4,93.3,93.9,95.1,97.6,99.3,101.1,100.6,99.3,97,96.4,98.7) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 60 > (np <- floor(n / par1)) [1] 5 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [1,] 86.9 94.5 100.7 102.6 94.4 [2,] 85.8 95.5 102.7 100.5 93.3 [3,] 84.4 96.3 106.5 105.2 93.9 [4,] 80.4 100.0 105.5 104.3 95.1 [5,] 84.4 103.1 110.1 104.1 97.6 [6,] 90.7 109.2 110.1 104.8 99.3 [7,] 91.6 108.7 109.0 105.2 101.1 [8,] 91.9 107.5 106.9 102.7 100.6 [9,] 92.5 104.5 108.0 101.0 99.3 [10,] 92.5 103.8 106.1 93.9 97.0 [11,] 92.0 102.5 101.7 90.2 96.4 [12,] 92.0 100.8 100.6 92.4 98.7 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 88.75833 102.20000 105.65833 100.57500 97.22500 > arr.sd [1] 4.164669 4.989808 3.479409 5.349278 2.646138 > arr.range [1] 12.1 14.7 9.5 15.0 7.8 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 2.55822 0.01585 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -0.06978 0.31705 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 9.99547 0.01845 > postscript(file="/var/wessaorg/rcomp/tmp/10jdd1337775143.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2d1a41337775143.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3bvj61337775143.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4mmlp1337775143.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5i2pp1337775143.tab") > > try(system("convert tmp/10jdd1337775143.ps tmp/10jdd1337775143.png",intern=TRUE)) character(0) > try(system("convert tmp/2d1a41337775143.ps tmp/2d1a41337775143.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.727 0.210 0.932