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Type 'q()' to quit R. > x <- array(list(-2,2,0,0,0,0,0,0,2,-2,0,0,0,0,4,-4,3,-3,1,-1,0,0,0,0,0,0,-5,5,1,-1,0,0,-1,1,1,-1,1,-1,0,0,0,0,-1,1,-5,5,3,-3,2,-2,1,-1,1,-1,0,0,0,0,-1,1,-2,2,1,-1,0,0,-1,1,-1,1,-2,2,-5,5,1,-1,0,0,0,0,0,0,0,0,-2,2,3,-3,2,-2,0,0,0,0,0,0,-1,1,-1,1,-1,1,2,-2,1,-1,1,-1,-1,1,-2,2,7,-7,4,-4,-2,2,4,-4,4,-4,1,-1,0,0,0,0,0,0,5,-5,5,-5,1,-1,1,-1,0,0,0,0,1,-1,1,-1,1,-1,0,0,0,0,-1,1,4,-4,4,-4,2,-2,1,-1,-1,1,2,-0.48,2,-0.48,1,-0.48,0,-0.48,0,-0.48,-2,-0.48,-1,-0.48,0,-0.48,5,-0.48,0,-0.48,0,-0.48,3,-0.48,0,-0.48,0,-0.48,-1,-0.48,3,-0.48),dim=c(2,98),dimnames=list(c('DiffWF','DiffWM'),1:98)) > y <- array(NA,dim=c(2,98),dimnames=list(c('DiffWF','DiffWM'),1:98)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > par3 = '0' > par2 = 'TRUE' > par1 = '3' > ylab = 'Test Scores' > xlab = 'CARE Variable Names' > main = 'CARE DATA' > par3 <- '0' > par2 <- 'TRUE' > par1 <- '3' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: aston2 > #To cite this work: Ian E. Holliday, 2012, CARE Boxplots and Scatterplot Matrix (v1.0.3) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/Ian.Holliday/rwasp_CARE%20Data%20Boxplot.wasp/ > #Source of accompanying publication: > # > par1 <- as.numeric(par1) #colour > par2<- as.logical(par2) # Notches ? > par3<-as.numeric(par3) # % trim > if(par3>45){par3<-45;warning('trim limited to 45%')} > if(par3<0){par3<-0;warning('negative trim makes no sense. Trim is zero.')} > lotrm<-as.integer(length(y[1,])*par3/100)+1 > hitrm<-as.integer(length(y[1,])*(100-par3)/100) > y1<-array(dim=c(dim(y)[1], hitrm-lotrm+1), dimnames=list(dimnames(y)[[1]], 1:(hitrm-lotrm+1) )) > for(i in 1:dim(y)[1]){ + tmp<-order(y[i,]) + y1[i,]<- y[i, tmp[lotrm:hitrm] ] + } > postscript(file="/var/www/rcomp/tmp/15uak1338123325.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > pairs(t(y)) > dev.off() null device 1 > y<-y1 > z <- as.data.frame(t(y)) > postscript(file="/var/www/rcomp/tmp/2qk191338123325.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > (r<-boxplot(z ,xlab=xlab,ylab=ylab,main=main,notch=par2,col=par1)) $stats [,1] [,2] [1,] -1 -2.00 [2,] 0 -1.00 [3,] 0 -0.48 [4,] 1 0.00 [5,] 2 1.00 $n [1] 98 98 $conf [,1] [,2] [1,] -0.1596041 -0.6396041 [2,] 0.1596041 -0.3203959 $out [1] -5 -5 -5 -2 -2 -2 -2 -2 -2 -2 3 3 3 3 3 4 4 4 4 4 4 5 5 5 7 [26] -7 -5 -5 -4 -4 -4 -4 -4 -4 -3 -3 -3 2 2 2 2 2 2 5 5 5 $group [1] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 [39] 2 2 2 2 2 2 2 2 $names [1] "DiffWF" "DiffWM" Warning message: In bxp(list(stats = c(-1, 0, 0, 1, 2, -2, -1, -0.48, 0, 1), n = c(98, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > #Note: the /var/www/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/www/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,hyperlink('http://www.xycoon.com/overview.htm','Boxplot statistics','Boxplot overview'),6,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Variable',1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/lower_whisker.htm','lower whisker','definition of lower whisker'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/lower_hinge.htm','lower hinge','definition of lower hinge'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/central_tendency.htm','median','definitions about measures of central tendency'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/upper_hinge.htm','upper hinge','definition of upper hinge'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/upper_whisker.htm','upper whisker','definition of upper whisker'),1,TRUE) > a<-table.row.end(a) > for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + for (j in 1:5) + { + a<-table.element(a,signif(r$stats[j,i], digits=4)) + } + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/www/rcomp/tmp/3qjtt1338123325.tab") > if (par2){ + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Boxplot Notches',4,TRUE) + a<-table.row.end(a) + a<-table.row.start(a) + a<-table.element(a,'Variable',1,TRUE) + a<-table.element(a,'lower bound',1,TRUE) + a<-table.element(a,'median',1,TRUE) + a<-table.element(a,'upper bound',1,TRUE) + a<-table.row.end(a) + for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + a<-table.element(a,signif(r$conf[1,i], digits=4)) + a<-table.element(a, signif(r$stats[3,i], digits=4)) + a<-table.element(a,signif(r$conf[2,i], digits=4)) + a<-table.row.end(a) + } + a<-table.end(a) + table.save(a,file="/var/www/rcomp/tmp/4qpgb1338123325.tab") + } > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Boxplot Means',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Variable',1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/trimmed_mean.htm','trimmed mean','definition of trimmed mean'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/unbiased1.htm','unbiased SD','definition of unbiased SD'),1,TRUE) > a<-table.row.end(a) > for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + a<-table.element(a,signif(mean(z[i], trim=par3/100, na.rm=TRUE), digits=4)) + a<-table.element(a,signif(sd(z[i], na.rm=TRUE), digits=4)) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/www/rcomp/tmp/5g6wy1338123325.tab") > > try(system("convert tmp/15uak1338123325.ps tmp/15uak1338123325.png",intern=TRUE)) character(0) > try(system("convert tmp/2qk191338123325.ps tmp/2qk191338123325.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 0.610 0.410 1.014