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Type 'q()' to quit R. > x <- c(9.676,8.642,9.402,9.610,9.294,9.448,10.319,9.548,9.801,9.596,8.923,9.746,9.829,9.125,9.782,9.441,9.162,9.915,10.444,10.209,9.985,9.842,9.429,10.132,9.849,9.172,10.313,9.819,9.955,10.048,10.082,10.541,10.208,10.233,9.439,9.963,10.158,9.225,10.474,9.757,10.490,10.281,10.444,10.640,10.695,10.786,9.832,9.747,10.411,9.511,10.402,9.701,10.540,10.112,10.915,11.183,10.384,10.834,9.886,10.216,10.943,9.867,10.203,10.837,10.573,10.647,11.502,10.656,10.866,10.835,9.945,10.331,10.718,9.462,10.579,10.633,10.346,10.757,11.207,11.013,11.015,10.765,10.042,10.661) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 9.676 9.829 9.849 10.158 10.411 10.943 10.718 [2,] 8.642 9.125 9.172 9.225 9.511 9.867 9.462 [3,] 9.402 9.782 10.313 10.474 10.402 10.203 10.579 [4,] 9.610 9.441 9.819 9.757 9.701 10.837 10.633 [5,] 9.294 9.162 9.955 10.490 10.540 10.573 10.346 [6,] 9.448 9.915 10.048 10.281 10.112 10.647 10.757 [7,] 10.319 10.444 10.082 10.444 10.915 11.502 11.207 [8,] 9.548 10.209 10.541 10.640 11.183 10.656 11.013 [9,] 9.801 9.985 10.208 10.695 10.384 10.866 11.015 [10,] 9.596 9.842 10.233 10.786 10.834 10.835 10.765 [11,] 8.923 9.429 9.439 9.832 9.886 9.945 10.042 [12,] 9.746 10.132 9.963 9.747 10.216 10.331 10.661 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 9.500417 9.774583 9.968500 10.210750 10.341250 10.600417 10.599833 > arr.sd [1] 0.4264344 0.4116551 0.3747223 0.4762713 0.4959060 0.4588284 0.4722495 > arr.range [1] 1.677 1.319 1.369 1.561 1.672 1.635 1.745 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -0.21219 0.06481 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -4.235 1.477 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -0.2642 0.1807 > postscript(file="/var/fisher/rcomp/tmp/1rllf1353936570.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2sx6q1353936570.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3sx7g1353936570.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4julz1353936570.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5nh2v1353936570.tab") > > try(system("convert tmp/1rllf1353936570.ps tmp/1rllf1353936570.png",intern=TRUE)) character(0) > try(system("convert tmp/2sx6q1353936570.ps tmp/2sx6q1353936570.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.259 0.349 1.595