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Type 'q()' to quit R. > x <- c(9.24,9.29,9.39,9.42,9.42,9.43,9.5,9.53,9.58,9.58,9.6,9.61,9.65,9.71,9.78,9.79,9.84,9.87,9.9,9.95,9.96,9.98,10.01,10,10.03,10.05,10.06,10.09,10.24,10.23,10.27,10.28,10.29,10.44,10.51,10.52,10.57,10.62,10.71,10.73,10.74,10.75,10.79,10.81,10.87,10.92,10.95,10.94,10.97,10.99,11.04,11.09,11.12,11.11,11.14,11.2,11.25,11.3,11.31,11.31,11.33,11.41,11.46,11.48,11.58,11.63,11.69,11.74,11.68,11.69,11.71,11.75) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 6 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [1,] 9.24 9.65 10.03 10.57 10.97 11.33 [2,] 9.29 9.71 10.05 10.62 10.99 11.41 [3,] 9.39 9.78 10.06 10.71 11.04 11.46 [4,] 9.42 9.79 10.09 10.73 11.09 11.48 [5,] 9.42 9.84 10.24 10.74 11.12 11.58 [6,] 9.43 9.87 10.23 10.75 11.11 11.63 [7,] 9.50 9.90 10.27 10.79 11.14 11.69 [8,] 9.53 9.95 10.28 10.81 11.20 11.74 [9,] 9.58 9.96 10.29 10.87 11.25 11.68 [10,] 9.58 9.98 10.44 10.92 11.30 11.69 [11,] 9.60 10.01 10.51 10.95 11.31 11.71 [12,] 9.61 10.00 10.52 10.94 11.31 11.75 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 9.465833 9.870000 10.250833 10.783333 11.152500 11.595833 > arr.sd [1] 0.1218388 0.1180909 0.1732291 0.1216054 0.1215151 0.1417077 > arr.range [1] 0.37 0.36 0.49 0.38 0.34 0.42 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.10133 0.00301 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -2.7104 0.2906 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 0.355300 0.003615 > postscript(file="/var/wessaorg/rcomp/tmp/17mvt1354120164.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2m8qt1354120164.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/32hu81354120164.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4k4ok1354120164.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5lcup1354120165.tab") > > try(system("convert tmp/17mvt1354120164.ps tmp/17mvt1354120164.png",intern=TRUE)) character(0) > try(system("convert tmp/2m8qt1354120164.ps tmp/2m8qt1354120164.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.225 0.247 1.466