R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows" Copyright (C) 2012 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: i686-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(3.43,3.43,3.43,3.43,3.43,3.43,3.43,3.43,3.5,3.52,3.53,3.53,3.53,3.53,3.53,3.53,3.53,3.53,3.53,3.53,3.58,3.58,3.59,3.59,3.59,3.59,3.59,3.59,3.59,3.59,3.59,3.61,3.71,3.83,3.83,3.83,3.83,3.83,3.83,3.83,3.83,3.83,3.83,3.83,3.92,3.92,3.92,3.92,3.92,3.92,3.92,3.92,3.92,3.92,3.92,3.92,3.98,3.98,3.98,3.98,3.98,3.98,3.98,3.98,3.98,3.98,3.98,3.98,4.09,4.09,4.09,4.09) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Mean Plot (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_meanplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 6 > arr <- array(NA,dim=c(par1,np+1)) > darr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > dx <- diff(x) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + darr[j,ari[j]] <- dx[i] + if (j == par1) j = 0 + } > ari [1] 6 6 6 6 6 6 6 6 6 6 6 6 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [2,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [3,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [4,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [5,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [6,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [7,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [8,] 3.43 3.53 3.61 3.83 3.92 3.98 NA [9,] 3.50 3.58 3.71 3.92 3.98 4.09 NA [10,] 3.52 3.58 3.83 3.92 3.98 4.09 NA [11,] 3.53 3.59 3.83 3.92 3.98 4.09 NA [12,] 3.53 3.59 3.83 3.92 3.98 4.09 NA > darr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [2,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [3,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [4,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [5,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [6,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [7,] 0.00 0.00 0.02 0.00 0.00 0.00 NA [8,] 0.07 0.05 0.10 0.09 0.06 0.11 NA [9,] 0.02 0.00 0.12 0.00 0.00 0.00 NA [10,] 0.01 0.01 0.00 0.00 0.00 0.00 NA [11,] 0.00 0.00 0.00 0.00 0.00 0.00 NA [12,] 0.00 0.00 0.00 0.00 0.00 NA NA > arr.mean <- array(NA,dim=par1) > arr.median <- array(NA,dim=par1) > arr.midrange <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.mean[j] <- mean(arr[j,],na.rm=TRUE) + arr.median[j] <- median(arr[j,],na.rm=TRUE) + arr.midrange[j] <- (quantile(arr[j,],0.75,na.rm=TRUE) + quantile(arr[j,],0.25,na.rm=TRUE)) / 2 + } > overall.mean <- mean(x) > overall.median <- median(x) > overall.midrange <- (quantile(x,0.75) + quantile(x,0.25)) / 2 > postscript(file="/var/fisher/rcomp/tmp/13iro1350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,type='b',ylab='mean',main='Mean Plot',xlab='Periodic Index') > mtext(paste('#blocks = ',np)) > abline(overall.mean,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2tiyc1350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.median,type='b',ylab='median',main='Median Plot',xlab='Periodic Index') > mtext(paste('#blocks = ',np)) > abline(overall.median,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/3mgyu1350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.midrange,type='b',ylab='midrange',main='Midrange Plot',xlab='Periodic Index') > mtext(paste('#blocks = ',np)) > abline(overall.midrange,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/4hr2l1350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 3.43 3.43 3.43 3.43 3.43 3.43 3.43 3.43 3.500 3.520 3.530 3.530 [2,] 3.53 3.53 3.53 3.53 3.53 3.53 3.53 3.53 3.580 3.580 3.590 3.590 [3,] 3.71 3.71 3.71 3.71 3.71 3.71 3.71 3.72 3.815 3.875 3.875 3.875 [4,] 3.92 3.92 3.92 3.92 3.92 3.92 3.92 3.92 3.980 3.980 3.980 3.980 [5,] 3.98 3.98 3.98 3.98 3.98 3.98 3.98 3.98 4.090 4.090 4.090 4.090 $n [1] 6 6 6 6 6 6 6 6 6 6 6 6 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 3.458437 3.458437 3.458437 3.458437 3.458437 3.458437 3.458437 3.468437 [2,] 3.961563 3.961563 3.961563 3.961563 3.961563 3.961563 3.961563 3.971563 [,9] [,10] [,11] [,12] [1,] 3.556987 3.616987 3.623437 3.623437 [2,] 4.073013 4.133013 4.126563 4.126563 $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(3.43, 3.53, 3.71, 3.92, 3.98, 3.43, 3.53, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/5e0w21350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(darr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Differenced Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 0 0 0 0 0 0 0 0.05 0.00 0.00 0 0 [2,] 0 0 0 0 0 0 0 0.06 0.00 0.00 0 0 [3,] 0 0 0 0 0 0 0 0.08 0.00 0.00 0 0 [4,] 0 0 0 0 0 0 0 0.10 0.02 0.01 0 0 [5,] 0 0 0 0 0 0 0 0.11 0.02 0.01 0 0 $n [1] 6 6 6 6 6 6 6 6 6 6 6 5 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 0 0 0 0 0 0 0 0.05419871 -0.01290065 -0.006450323 [2,] 0 0 0 0 0 0 0 0.10580129 0.01290065 0.006450323 [,11] [,12] [1,] 0 0 [2,] 0 0 $out [1] 0.02 0.12 $group [1] 7 9 $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/6asnb1350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [2,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [3,] 3.43 3.53 3.59 3.83 3.92 3.98 NA [4,] 3.51 3.58 3.77 3.92 3.98 4.09 NA [5,] 3.53 3.59 3.83 3.92 3.98 4.09 NA $n [1] 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 3.393511 3.507195 3.507901 3.78895 3.892634 3.929828 NA [2,] 3.466489 3.552805 3.672099 3.87105 3.947366 4.030172 NA $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" NA Warning message: In bxp(list(stats = c(3.43, 3.43, 3.43, 3.51, 3.53, 3.53, 3.53, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/7cgcy1350836214.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.mean,arr.median,arr.midrange)) > names(z) <- list('mean','median','midrange') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Central Tendency',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 3.713333 3.710 3.72125 [2,] 3.713333 3.710 3.72125 [3,] 3.713333 3.710 3.72125 [4,] 3.808333 3.845 3.79625 [5,] 3.823333 3.875 3.80750 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 3.670003 3.648426 3.687042 [2,] 3.756663 3.771574 3.755458 $out numeric(0) $group numeric(0) $names [1] "mean" "median" "midrange" Warning message: In bxp(list(stats = c(3.71333333333333, 3.71333333333333, 3.71333333333333, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/13iro1350836214.ps tmp/13iro1350836214.png",intern=TRUE)) character(0) > try(system("convert tmp/2tiyc1350836214.ps tmp/2tiyc1350836214.png",intern=TRUE)) character(0) > try(system("convert tmp/3mgyu1350836214.ps tmp/3mgyu1350836214.png",intern=TRUE)) character(0) > try(system("convert tmp/4hr2l1350836214.ps tmp/4hr2l1350836214.png",intern=TRUE)) character(0) > try(system("convert tmp/5e0w21350836214.ps tmp/5e0w21350836214.png",intern=TRUE)) character(0) > try(system("convert tmp/6asnb1350836214.ps tmp/6asnb1350836214.png",intern=TRUE)) character(0) > try(system("convert tmp/7cgcy1350836214.ps tmp/7cgcy1350836214.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 3.326 0.659 3.978