R version 2.15.3 (2013-03-01) -- "Security Blanket" Copyright (C) 2013 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: i686-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(530.3,527.76,521.41,1601.93,1577.49,1551.43,1551.43,1516.88,1485.95,1438.22,1385.06,1329.49,1329.49,1276.16,1242.34,1181.59,1160.21,1135.18,1135.18,1084.96,1077.35,1061.13,1029.98,1013.08,1013.08,996.04,975.02,951.89,944.4,932.47,932.47,920.44,900.18,886.9,867.74,859.03,859.03,844.99,834.82,825.62,816.92,813.21,813.21,811.03,804.16,788.62,778.76,765.91,765.91,753.85,742.22,732.11,729.94,731.22,731.22,729.11,726.94,720.52,709.36,703.21,703.21,695.88,681.63,672.1,665.49,658.93,658.93,656,650.66,645.93,638.74,634.67) > par2 = '12' > par1 = '50' > par2 <- '12' > par1 <- '50' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Blocked Bootstrap Plot for Central Tendency (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_bootstrapplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > par2 <- as.numeric(par2) > if (par1 < 10) par1 = 10 > if (par1 > 5000) par1 = 5000 > if (par2 < 3) par2 = 3 > if (par2 > length(x)) par2 = length(x) > library(lattice) > library(boot) Attaching package: 'boot' The following object(s) are masked from 'package:lattice': melanoma > boot.stat <- function(s) + { + s.mean <- mean(s) + s.median <- median(s) + s.midrange <- (max(s) + min(s)) / 2 + c(s.mean, s.median, s.midrange) + } > (r <- tsboot(x, boot.stat, R=par1, l=12, sim='fixed')) BLOCK BOOTSTRAP FOR TIME SERIES Fixed Block Length of 12 Call: tsboot(tseries = x, statistic = boot.stat, R = par1, l = 12, sim = "fixed") Bootstrap Statistics : original bias std. error t1* 922.4683 11.52345 100.35210 t2* 830.2200 48.35160 135.67766 t3* 1061.6700 -15.49310 52.28559 > postscript(file="/var/fisher/rcomp/tmp/1il331366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,1],type='p',ylab='simulated values',main='Simulation of Mean') > grid() > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2a9gm1366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,2],type='p',ylab='simulated values',main='Simulation of Median') > grid() > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/3itqn1366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(r$t[,3],type='p',ylab='simulated values',main='Simulation of Midrange') > grid() > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/4nksk1366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,1],col='black',main='Density Plot',xlab='mean') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/5q9681366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,2],col='black',main='Density Plot',xlab='median') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/63f3l1366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > densityplot(~r$t[,3],col='black',main='Density Plot',xlab='midrange') > dev.off() null device 1 > z <- data.frame(cbind(r$t[,1],r$t[,2],r$t[,3])) > colnames(z) <- list('mean','median','midrange') > postscript(file="/var/fisher/rcomp/tmp/7ufnb1366666130.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > boxplot(z,notch=TRUE,ylab='simulated values',main='Bootstrap Simulation - Central Tendency') > grid() > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Estimation Results of Blocked Bootstrap',6,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'statistic',header=TRUE) > a<-table.element(a,'Q1',header=TRUE) > a<-table.element(a,'Estimate',header=TRUE) > a<-table.element(a,'Q3',header=TRUE) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,'IQR',header=TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'mean',header=TRUE) > q1 <- quantile(r$t[,1],0.25)[[1]] > q3 <- quantile(r$t[,1],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[1]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,1]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'median',header=TRUE) > q1 <- quantile(r$t[,2],0.25)[[1]] > q3 <- quantile(r$t[,2],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[2]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,2]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'midrange',header=TRUE) > q1 <- quantile(r$t[,3],0.25)[[1]] > q3 <- quantile(r$t[,3],0.75)[[1]] > a<-table.element(a,q1) > a<-table.element(a,r$t0[3]) > a<-table.element(a,q3) > a<-table.element(a,sqrt(var(r$t[,3]))) > a<-table.element(a,q3-q1) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/808cu1366666130.tab") > > try(system("convert tmp/1il331366666130.ps tmp/1il331366666130.png",intern=TRUE)) character(0) > try(system("convert tmp/2a9gm1366666130.ps tmp/2a9gm1366666130.png",intern=TRUE)) character(0) > try(system("convert tmp/3itqn1366666130.ps tmp/3itqn1366666130.png",intern=TRUE)) character(0) > try(system("convert tmp/4nksk1366666130.ps tmp/4nksk1366666130.png",intern=TRUE)) character(0) > try(system("convert tmp/5q9681366666130.ps tmp/5q9681366666130.png",intern=TRUE)) character(0) > try(system("convert tmp/63f3l1366666130.ps tmp/63f3l1366666130.png",intern=TRUE)) character(0) > try(system("convert tmp/7ufnb1366666130.ps tmp/7ufnb1366666130.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 3.524 0.530 4.045