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Type 'q()' to quit R. > x <- c(0.6,0.59,0.61,0.61,0.6,0.6,0.58,0.63,0.65,0.62,0.61,0.67,0.66,0.59,0.54,0.53,0.5,0.5,0.52,0.53,0.54,0.54,0.55,0.52,0.47,0.47,0.44,0.45,0.43,0.41,0.4,0.37,0.37,0.4,0.45,0.4,0.38,0.43,0.53,0.59,0.57,0.61,0.57,0.56,0.53,0.55,0.55,0.58,0.58,0.56,0.52,0.49,0.48,0.46,0.47,0.44,0.45,0.45,0.43,0.44,0.45,0.45,0.45,0.46,0.46,0.45,0.43,0.44,0.47,0.47,0.5,0.51) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 72 > (np <- floor(n / par1)) [1] 6 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 6 6 6 6 6 6 6 6 6 6 6 6 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 0.60 0.66 0.47 0.38 0.58 0.45 NA [2,] 0.59 0.59 0.47 0.43 0.56 0.45 NA [3,] 0.61 0.54 0.44 0.53 0.52 0.45 NA [4,] 0.61 0.53 0.45 0.59 0.49 0.46 NA [5,] 0.60 0.50 0.43 0.57 0.48 0.46 NA [6,] 0.60 0.50 0.41 0.61 0.46 0.45 NA [7,] 0.58 0.52 0.40 0.57 0.47 0.43 NA [8,] 0.63 0.53 0.37 0.56 0.44 0.44 NA [9,] 0.65 0.54 0.37 0.53 0.45 0.47 NA [10,] 0.62 0.54 0.40 0.55 0.45 0.47 NA [11,] 0.61 0.55 0.45 0.55 0.43 0.50 NA [12,] 0.67 0.52 0.40 0.58 0.44 0.51 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/fisher/rcomp/tmp/1jes71367007895.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2kn1j1367007896.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/3kw5u1367007896.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/4lfr41367007896.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 0.380 0.430 0.440 0.45 0.43 0.41 0.400 0.370 0.37 0.400 0.430 0.400 [2,] 0.450 0.450 0.450 0.46 0.46 0.45 0.430 0.440 0.45 0.450 0.450 0.440 [3,] 0.525 0.515 0.525 0.51 0.49 0.48 0.495 0.485 0.50 0.505 0.525 0.515 [4,] 0.600 0.590 0.540 0.59 0.57 0.60 0.570 0.560 0.54 0.550 0.550 0.580 [5,] 0.660 0.590 0.610 0.61 0.60 0.61 0.580 0.630 0.65 0.620 0.610 0.670 $n [1] 6 6 6 6 6 6 6 6 6 6 6 6 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 0.4282452 0.4246955 0.4669471 0.4261458 0.4190464 0.3832452 0.4046955 [2,] 0.6217548 0.6053045 0.5830529 0.5938542 0.5609536 0.5767548 0.5853045 [,8] [,9] [,10] [,11] [,12] [1,] 0.4075961 0.4419471 0.4404968 0.4604968 0.4246955 [2,] 0.5624039 0.5580529 0.5695032 0.5895032 0.6053045 $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(0.38, 0.45, 0.525, 0.6, 0.66, 0.43, 0.45, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/587v11367007896.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 0.580 0.500 0.37 0.530 0.430 0.430 NA [2,] 0.600 0.520 0.40 0.530 0.445 0.450 NA [3,] 0.610 0.535 0.42 0.555 0.465 0.455 NA [4,] 0.625 0.545 0.45 0.575 0.505 0.470 NA [5,] 0.650 0.550 0.47 0.610 0.580 0.470 NA $n [1] 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 0.5985973 0.5235973 0.3971947 0.5344752 0.4376336 0.4458779 NA [2,] 0.6214027 0.5464027 0.4428053 0.5755248 0.4923664 0.4641221 NA $out [1] 0.67 0.66 0.59 0.38 0.43 0.50 0.51 $group [1] 1 2 2 4 4 6 6 $names [1] "1" "2" "3" "4" "5" "6" NA Warning message: In bxp(list(stats = c(0.58, 0.6, 0.61, 0.625, 0.65, 0.5, 0.52, 0.535, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/6e1yd1367007896.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 0.06284903 0.160 0.0700 [2,] 0.06755065 0.170 0.0875 [3,] 0.07682317 0.190 0.1075 [4,] 0.09520153 0.265 0.1200 [5,] 0.10633281 0.280 0.1400 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 0.06421141 0.1466699 0.09267653 [2,] 0.08943492 0.2333301 0.12232347 $out numeric(0) $group numeric(0) $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(0.0628490254498827, 0.067550646433696, 0.0768231678004742, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/1jes71367007895.ps tmp/1jes71367007895.png",intern=TRUE)) character(0) > try(system("convert tmp/2kn1j1367007896.ps tmp/2kn1j1367007896.png",intern=TRUE)) character(0) > try(system("convert tmp/3kw5u1367007896.ps tmp/3kw5u1367007896.png",intern=TRUE)) character(0) > try(system("convert tmp/4lfr41367007896.ps tmp/4lfr41367007896.png",intern=TRUE)) character(0) > try(system("convert tmp/587v11367007896.ps tmp/587v11367007896.png",intern=TRUE)) character(0) > try(system("convert tmp/6e1yd1367007896.ps tmp/6e1yd1367007896.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.993 0.561 3.539