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Type 'q()' to quit R. > x <- c(145756,145472,145160,144588,150460,150172,145756,142820,143108,143108,143392,143992,143992,141340,140172,141340,145472,144872,139288,134560,133676,131908,133104,134560,133988,132792,130456,132792,134872,134272,127492,124556,121620,119256,118972,120736,118372,117488,116604,121620,122192,119256,111304,107772,102188,99820,100988,102756,102756,101304,100988,105720,109540,107772,101872,98940,92756,88936,91872,94808,94808,90988,90704,95688,98940,97768,91872,88052,79788,76568,77736,82752,83036,75684,78336,84804,87740,85972,78024,72436,65968,60952,63004,67420,66252,59784,61836,68304,71840,69788,61836,58304,53004,47416,48300,52716,53288,47988,48872,56252,58016,55056,44168,38584,31204,23852,26216,29436,28868,23252,26500,34452,37984,36220,29152,23568,17668,10884,12084,14136) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 120 > (np <- floor(n / par1)) [1] 10 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 145756 143992 133988 118372 102756 94808 83036 66252 53288 28868 [2,] 145472 141340 132792 117488 101304 90988 75684 59784 47988 23252 [3,] 145160 140172 130456 116604 100988 90704 78336 61836 48872 26500 [4,] 144588 141340 132792 121620 105720 95688 84804 68304 56252 34452 [5,] 150460 145472 134872 122192 109540 98940 87740 71840 58016 37984 [6,] 150172 144872 134272 119256 107772 97768 85972 69788 55056 36220 [7,] 145756 139288 127492 111304 101872 91872 78024 61836 44168 29152 [8,] 142820 134560 124556 107772 98940 88052 72436 58304 38584 23568 [9,] 143108 133676 121620 102188 92756 79788 65968 53004 31204 17668 [10,] 143108 131908 119256 99820 88936 76568 60952 47416 23852 10884 [11,] 143392 133104 118972 100988 91872 77736 63004 48300 26216 12084 [12,] 143992 134560 120736 102756 94808 82752 67420 52716 29436 14136 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 145315.33 138690.33 127650.33 111696.67 99772.00 88805.33 75281.33 [8] 59948.33 42744.33 24564.00 > arr.sd [1] 2566.260 4911.727 6299.072 8578.980 6510.964 7833.625 9293.387 [8] 8262.264 12443.339 9336.914 > arr.range [1] 7640 13564 15900 22372 20604 22372 26788 24424 34164 27100 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 1.269e+04 -5.558e-02 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 14.8459 -0.5294 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 36614.4505 -0.1654 > postscript(file="/var/wessaorg/rcomp/tmp/1wwtb1376734401.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2j2q81376734401.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3f7bp1376734401.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4be8o1376734401.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/594pl1376734402.tab") > > try(system("convert tmp/1wwtb1376734401.ps tmp/1wwtb1376734401.png",intern=TRUE)) character(0) > try(system("convert tmp/2j2q81376734401.ps tmp/2j2q81376734401.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.532 0.417 1.948