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Type 'q()' to quit R. > x <- c(12960,12480,13200,10560,13680,13440,14400,14880,16560,14400,13680,17040,14400,10800,12720,9600,13440,11040,14640,13200,13920,15600,15360,18240,13200,11040,12240,8880,12720,9840,13920,13200,11760,16800,15120,17280,12960,12000,10800,8880,11760,10560,14400,13920,12000,16080,14880,19200,15360,9360,9360,9360,11040,11040,14880,13680,12240,15360,14160,20400,16080,9360,9840,8160,11280,12960,16320,16080,12960,15120,13440,19200,14640,11760,10560,7920,11760,14160,16560,15600,11520,16560,12960,19920,16560,12000,11040,7440,11760,11280,17040,17040,12960,16800,12480,19440,16560,12240,9360,6480,12720,12240,16080,18480,13680,15360,11520,19920) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 108 > (np <- floor(n / par1)) [1] 9 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 12960 14400 13200 12960 15360 16080 14640 16560 16560 [2,] 12480 10800 11040 12000 9360 9360 11760 12000 12240 [3,] 13200 12720 12240 10800 9360 9840 10560 11040 9360 [4,] 10560 9600 8880 8880 9360 8160 7920 7440 6480 [5,] 13680 13440 12720 11760 11040 11280 11760 11760 12720 [6,] 13440 11040 9840 10560 11040 12960 14160 11280 12240 [7,] 14400 14640 13920 14400 14880 16320 16560 17040 16080 [8,] 14880 13200 13200 13920 13680 16080 15600 17040 18480 [9,] 16560 13920 11760 12000 12240 12960 11520 12960 13680 [10,] 14400 15600 16800 16080 15360 15120 16560 16800 15360 [11,] 13680 15360 15120 14880 14160 13440 12960 12480 11520 [12,] 17040 18240 17280 19200 20400 19200 19920 19440 19920 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 13940 13580 13000 13120 13020 13400 13660 13820 13720 > arr.sd [1] 1738.087 2370.270 2543.698 2786.356 3292.504 3314.234 3244.979 3486.139 [9] 3802.774 > arr.range [1] 6480 8640 8400 10320 11040 11040 12000 12000 13440 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 4400.9138 -0.1074 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 20.292 -1.296 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 7369.7240 0.2229 > postscript(file="/var/wessaorg/rcomp/tmp/1hfzv1376937085.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2nnan1376937085.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3j47q1376937085.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4ynfv1376937085.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5mumb1376937085.tab") > > try(system("convert tmp/1hfzv1376937085.ps tmp/1hfzv1376937085.png",intern=TRUE)) character(0) > try(system("convert tmp/2nnan1376937085.ps tmp/2nnan1376937085.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.014 0.555 2.536