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Type 'q()' to quit R. > x <- c(120.6,119.9,119.48,117.45,118.37,117.07,114.98,112.59,111.7,112.04,110.79,109.82,109.11,109.84,109.31,108.29,107.42,106.71,105.11,104.43,105.55,106.12,105.78,105.33,104.63,104.62,105.57,107.5,107.52,107.76,106.74,106.21,105.77,105.27,104.35,103.52,102.28,100.93,101.04,99.95,99.55,99.56,99.01,98.64,98.98,100.8,100.32,100.72,280.8,280.4,280.4,280.3,281,280.9,279.7,283.1,290.6,291.6,291.7,291.8,291.7,291.5,291.7,293.4,293.1,293.1,292.6,292.1,292.2,292,292.1,293.4,292.2,292.1,291.6,290.9,290.9,290.8,290.5,290,290.2,290.1,291,291.8) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 120.60 109.11 104.63 102.28 280.8 291.7 292.2 [2,] 119.90 109.84 104.62 100.93 280.4 291.5 292.1 [3,] 119.48 109.31 105.57 101.04 280.4 291.7 291.6 [4,] 117.45 108.29 107.50 99.95 280.3 293.4 290.9 [5,] 118.37 107.42 107.52 99.55 281.0 293.1 290.9 [6,] 117.07 106.71 107.76 99.56 280.9 293.1 290.8 [7,] 114.98 105.11 106.74 99.01 279.7 292.6 290.5 [8,] 112.59 104.43 106.21 98.64 283.1 292.1 290.0 [9,] 111.70 105.55 105.77 98.98 290.6 292.2 290.2 [10,] 112.04 106.12 105.27 100.80 291.6 292.0 290.1 [11,] 110.79 105.78 104.35 100.32 291.7 292.1 291.0 [12,] 109.82 105.33 103.52 100.72 291.8 293.4 291.8 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 115.3992 106.9167 105.7883 100.1483 284.3583 292.4083 291.0083 > arr.sd [1] 3.8752043 1.8346728 1.3861971 1.0621747 5.2886600 0.6868351 0.7633161 > arr.range [1] 10.78 5.41 4.24 3.64 12.10 1.90 2.20 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 1.91702 0.00114 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 1.5553 -0.2107 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 6.349313 -0.003222 > postscript(file="/var/fisher/rcomp/tmp/19red1385986184.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2rq3e1385986184.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3pita1385986185.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4bsql1385986185.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5lums1385986185.tab") > > try(system("convert tmp/19red1385986184.ps tmp/19red1385986184.png",intern=TRUE)) character(0) > try(system("convert tmp/2rq3e1385986184.ps tmp/2rq3e1385986184.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.938 0.846 3.825