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Type 'q()' to quit R. > x <- array(list(111 + ,45 + ,27 + ,52 + ,102 + ,50 + ,18 + ,55 + ,108 + ,49 + ,19 + ,80 + ,109 + ,55 + ,20 + ,45 + ,118 + ,39 + ,29 + ,60 + ,79 + ,68 + ,46 + ,34 + ,88 + ,69 + ,27 + ,45 + ,102 + ,56 + ,23 + ,68 + ,105 + ,58 + ,29 + ,26 + ,92 + ,48 + ,38 + ,70 + ,131 + ,34 + ,20 + ,85 + ,104 + ,50 + ,37 + ,54 + ,83 + ,76 + ,32 + ,55 + ,84 + ,49 + ,26 + ,40 + ,85 + ,51 + ,40 + ,55 + ,110 + ,53 + ,30 + ,50 + ,121 + ,36 + ,26 + ,71 + ,120 + ,62 + ,23 + ,55 + ,100 + ,46 + ,27 + ,70 + ,94 + ,50 + ,38 + ,55 + ,89 + ,47 + ,25 + ,60 + ,93 + ,50 + ,33 + ,65 + ,128 + ,44 + ,45 + ,66 + ,84 + ,50 + ,34 + ,55 + ,127 + ,29 + ,20 + ,90 + ,106 + ,49 + ,24 + ,55 + ,129 + ,26 + ,26 + ,60 + ,82 + ,79 + ,26 + ,35 + ,106 + ,53 + ,39 + ,55 + ,109 + ,53 + ,27 + ,26 + ,91 + ,72 + ,18 + ,14 + ,111 + ,35 + ,34 + ,45 + ,105 + ,42 + ,25 + ,35 + ,118 + ,37 + ,26 + ,65 + ,103 + ,46 + ,28 + ,35 + ,101 + ,48 + ,21 + ,60 + ,101 + ,46 + ,39 + ,60 + ,95 + ,49 + ,25 + ,60 + ,108 + ,65 + ,29 + ,65 + ,95 + ,52 + ,37 + ,45 + ,98 + ,75 + ,34 + ,20 + ,82 + ,58 + ,30 + ,50 + ,100 + ,43 + ,28 + ,60 + ,100 + ,60 + ,25 + ,48 + ,107 + ,43 + ,27 + ,40 + ,95 + ,51 + ,33 + ,55 + ,97 + ,70 + ,30 + ,54 + ,93 + ,69 + ,26 + ,40 + ,81 + ,65 + ,18 + ,40 + ,89 + ,63 + ,21 + ,34 + ,111 + ,44 + ,39 + ,60 + ,95 + ,61 + ,36 + ,30 + ,106 + ,40 + ,32 + ,75 + ,83 + ,62 + ,23 + ,24 + ,81 + ,59 + ,27 + ,30 + ,115 + ,47 + ,45 + ,80 + ,112 + ,50 + ,24 + ,60 + ,92 + ,50 + ,29 + ,46 + ,85 + ,65 + ,21 + ,35 + ,95 + ,54 + ,28 + ,60 + ,115 + ,44 + ,37 + ,75 + ,91 + ,66 + ,22 + ,54 + ,107 + ,34 + ,31 + ,78 + ,102 + ,74 + ,32 + ,20 + ,86 + ,57 + ,20 + ,45 + ,96 + ,60 + ,33 + ,60 + ,114 + ,36 + ,32 + ,70 + ,105 + ,50 + ,18 + ,35 + ,82 + ,60 + ,44 + ,20 + ,120 + ,45 + ,24 + ,60 + ,88 + ,55 + ,21 + ,20 + ,90 + ,44 + ,29 + ,50 + ,85 + ,57 + ,30 + ,50 + ,106 + ,33 + ,37 + ,75 + ,109 + ,30 + ,33 + ,70 + ,75 + ,64 + ,25 + ,20 + ,91 + ,49 + ,19 + ,45 + ,96 + ,76 + ,16 + ,20 + ,108 + ,40 + ,31 + ,50 + ,86 + ,48 + ,29 + ,55 + ,98 + ,65 + ,37 + ,15 + ,99 + ,50 + ,41 + ,26 + ,95 + ,70 + ,28 + ,25 + ,88 + ,78 + ,19 + ,30 + ,111 + ,44 + ,28 + ,60 + ,103 + ,48 + ,33 + ,40 + ,107 + ,52 + ,32 + ,40 + ,118 + ,40 + ,28 + ,50) + ,dim=c(4 + ,88) + ,dimnames=list(c('IQ' + ,'Add' + ,'MumAge' + ,'Grade') + ,1:88)) > y <- array(NA,dim=c(4,88),dimnames=list(c('IQ','Add','MumAge','Grade'),1:88)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > par3 = 'FALSE' > par2 = '2' > par1 = '1' > ylab = 'Y Variable Name' > xlab = 'X Variable Name' > main = 'Title Goes Here' > par3 <- 'FALSE' > par2 <- '2' > par1 <- '1' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: aston2 > #To cite this work: Ian E. Holliday, 2012, One-Way-Between-Groups ANOVA (v1.0.4) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/Ian.Holliday/rwasp_One%20Factor%20ANOVA.wasp/ > #Source of accompanying publication: > # > cat1 <- as.numeric(par1) # > cat2<- as.numeric(par2) # > intercept<-as.logical(par3) > x <- t(x) > x1<-as.numeric(x[,cat1]) > f1<-as.character(x[,cat2]) > xdf<-data.frame(x1,f1) > (V1<-dimnames(y)[[1]][cat1]) [1] "IQ" > (V2<-dimnames(y)[[1]][cat2]) [1] "Add" > names(xdf)<-c('Response', 'Treatment') > if(intercept == FALSE) (lmxdf<-lm(Response ~ Treatment - 1, data = xdf) ) else (lmxdf<-lm(Response ~ Treatment, data = xdf) ) Call: lm(formula = Response ~ Treatment - 1, data = xdf) Coefficients: Treatment26 Treatment29 Treatment30 Treatment33 Treatment34 Treatment35 129.00 127.00 109.00 106.00 119.00 111.00 Treatment36 Treatment37 Treatment39 Treatment40 Treatment42 Treatment43 117.50 118.00 118.00 110.67 105.00 103.50 Treatment44 Treatment45 Treatment46 Treatment47 Treatment48 Treatment49 111.00 115.50 101.33 102.00 95.50 96.80 Treatment50 Treatment51 Treatment52 Treatment53 Treatment54 Treatment55 98.33 90.00 101.00 108.33 95.00 98.50 Treatment56 Treatment57 Treatment58 Treatment59 Treatment60 Treatment61 102.00 85.50 93.50 81.00 92.67 95.00 Treatment62 Treatment63 Treatment64 Treatment65 Treatment66 Treatment68 101.50 89.00 75.00 93.00 91.00 79.00 Treatment69 Treatment70 Treatment72 Treatment74 Treatment75 Treatment76 90.50 96.00 91.00 102.00 98.00 89.50 Treatment78 Treatment79 88.00 82.00 > (aov.xdf<-aov(lmxdf) ) Call: aov(formula = lmxdf) Terms: Treatment Residuals Sum of Squares 892392 4755 Deg. of Freedom 44 44 Residual standard error: 10.39555 Estimated effects are balanced > (anova.xdf<-anova(lmxdf) ) Analysis of Variance Table Response: Response Df Sum Sq Mean Sq F value Pr(>F) Treatment 44 892392 20281.6 187.68 < 2.2e-16 *** Residuals 44 4755 108.1 --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'ANOVA Model', length(lmxdf$coefficients)+1,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a, paste(V1, ' ~ ', V2), length(lmxdf$coefficients)+1,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a, 'means',,TRUE) > for(i in 1:length(lmxdf$coefficients)){ + a<-table.element(a, round(lmxdf$coefficients[i], digits=3),,FALSE) + } > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/181ks1386028079.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'ANOVA Statistics', 5+1,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a, ' ',,TRUE) > a<-table.element(a, 'Df',,FALSE) > a<-table.element(a, 'Sum Sq',,FALSE) > a<-table.element(a, 'Mean Sq',,FALSE) > a<-table.element(a, 'F value',,FALSE) > a<-table.element(a, 'Pr(>F)',,FALSE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a, V2,,TRUE) > a<-table.element(a, anova.xdf$Df[1],,FALSE) > a<-table.element(a, round(anova.xdf$'Sum Sq'[1], digits=3),,FALSE) > a<-table.element(a, round(anova.xdf$'Mean Sq'[1], digits=3),,FALSE) > a<-table.element(a, round(anova.xdf$'F value'[1], digits=3),,FALSE) > a<-table.element(a, round(anova.xdf$'Pr(>F)'[1], digits=3),,FALSE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a, 'Residuals',,TRUE) > a<-table.element(a, anova.xdf$Df[2],,FALSE) > a<-table.element(a, round(anova.xdf$'Sum Sq'[2], digits=3),,FALSE) > a<-table.element(a, round(anova.xdf$'Mean Sq'[2], digits=3),,FALSE) > a<-table.element(a, ' ',,FALSE) > a<-table.element(a, ' ',,FALSE) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/2f0nh1386028079.tab") > postscript(file="/var/fisher/rcomp/tmp/3rc9l1386028079.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > boxplot(Response ~ Treatment, data=xdf, xlab=V2, ylab=V1) > dev.off() null device 1 > if(intercept==TRUE){ + 'Tukey Plot' + thsd<-TukeyHSD(aov.xdf) + postscript(file="/var/fisher/rcomp/tmp/4xht41386028079.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) + plot(thsd) + dev.off() + } > if(intercept==TRUE){ + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Tukey Honest Significant Difference Comparisons', 5,TRUE) + a<-table.row.end(a) + a<-table.row.start(a) + a<-table.element(a, ' ', 1, TRUE) + for(i in 1:4){ + a<-table.element(a,colnames(thsd[[1]])[i], 1, TRUE) + } + a<-table.row.end(a) + for(i in 1:length(rownames(thsd[[1]]))){ + a<-table.row.start(a) + a<-table.element(a,rownames(thsd[[1]])[i], 1, TRUE) + for(j in 1:4){ + a<-table.element(a,round(thsd[[1]][i,j], digits=3), 1, FALSE) + } + a<-table.row.end(a) + } + a<-table.end(a) + table.save(a,file="/var/fisher/rcomp/tmp/509xb1386028079.tab") + } > if(intercept==FALSE){ + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'TukeyHSD Message', 1,TRUE) + a<-table.row.end(a) + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Must Include Intercept to use Tukey Test ', 1, FALSE) + a<-table.row.end(a) + a<-table.end(a) + table.save(a,file="/var/fisher/rcomp/tmp/6eb241386028079.tab") + } > library(car) Loading required package: MASS Loading required package: nnet > lt.lmxdf<-leveneTest(lmxdf) > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Levenes Test for Homogeneity of Variance', 4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,' ', 1, TRUE) > for (i in 1:3){ + a<-table.element(a,names(lt.lmxdf)[i], 1, FALSE) + } > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Group', 1, TRUE) > for (i in 1:3){ + a<-table.element(a,round(lt.lmxdf[[i]][1], digits=3), 1, FALSE) + } > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,' ', 1, TRUE) > a<-table.element(a,lt.lmxdf[[1]][2], 1, FALSE) > a<-table.element(a,' ', 1, FALSE) > a<-table.element(a,' ', 1, FALSE) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/7heyb1386028079.tab") > > try(system("convert tmp/3rc9l1386028079.ps tmp/3rc9l1386028079.png",intern=TRUE)) character(0) > try(system("convert tmp/4xht41386028079.ps tmp/4xht41386028079.png",intern=TRUE)) convert: unable to open image `tmp/4xht41386028079.ps': @ error/blob.c/OpenBlob/2587. convert: missing an image filename `tmp/4xht41386028079.png' @ error/convert.c/ConvertImageCommand/3011. character(0) attr(,"status") [1] 1 Warning message: running command 'convert tmp/4xht41386028079.ps tmp/4xht41386028079.png' had status 1 > > > proc.time() user system elapsed 1.761 0.523 2.254