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Type 'q()' to quit R. > x <- c(3.96,3.97,3.96,3.95,3.94,3.94,3.95,3.93,3.94,3.92,3.95,3.94,3.95,3.92,3.92,3.92,3.92,3.9,3.92,3.94,3.96,3.95,3.96,3.97,3.99,4,4.05,4.08,4.09,4.12,4.14,4.15,4.15,4.15,4.15,4.2,4.22,4.22,4.22,4.23,4.3,4.29,4.32,4.31,4.35,4.34,4.35,4.38,4.39,4.38,4.34,4.33,4.33,4.33,4.33,4.32,4.35,4.35,4.35,4.36,4.38,4.41,4.43,4.42,4.43,4.43,4.42,4.46,4.44,4.41,4.41,4.46,4.5,4.58,4.61,4.65,4.55,4.63,4.69,4.72,4.71,4.74,4.77,4.78) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 3.96 3.95 3.99 4.22 4.39 4.38 4.50 [2,] 3.97 3.92 4.00 4.22 4.38 4.41 4.58 [3,] 3.96 3.92 4.05 4.22 4.34 4.43 4.61 [4,] 3.95 3.92 4.08 4.23 4.33 4.42 4.65 [5,] 3.94 3.92 4.09 4.30 4.33 4.43 4.55 [6,] 3.94 3.90 4.12 4.29 4.33 4.43 4.63 [7,] 3.95 3.92 4.14 4.32 4.33 4.42 4.69 [8,] 3.93 3.94 4.15 4.31 4.32 4.46 4.72 [9,] 3.94 3.96 4.15 4.35 4.35 4.44 4.71 [10,] 3.92 3.95 4.15 4.34 4.35 4.41 4.74 [11,] 3.95 3.96 4.15 4.35 4.35 4.41 4.77 [12,] 3.94 3.97 4.20 4.38 4.36 4.46 4.78 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 3.945833 3.935833 4.105833 4.294167 4.346667 4.425000 4.660833 > arr.sd [1] 0.01378954 0.02193309 0.06515134 0.05822501 0.02146173 0.02236068 0.08918401 > arr.range [1] 0.05 0.07 0.21 0.16 0.07 0.08 0.28 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -0.22166 0.06205 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -12.398 6.237 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -0.6733 0.1896 > postscript(file="/var/wessaorg/rcomp/tmp/19umh1386061369.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2917a1386061369.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3f3191386061369.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4qqav1386061369.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/52zga1386061369.tab") > > try(system("convert tmp/19umh1386061369.ps tmp/19umh1386061369.png",intern=TRUE)) character(0) > try(system("convert tmp/2917a1386061369.ps tmp/2917a1386061369.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.824 0.352 2.147