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Type 'q()' to quit R. > x <- c(86.86,86.79,82.52,86.87,81.62,82.66,89.87,92.04,79.74,77.75,79.12,76.37,75.01,77.6,77.81,81.7,76.47,74.72,84.43,86.72,70.99,75.43,74.14,73.3,71.97,69.27,74.13,76.4,72.26,72.1,87.82,91.62,82.69,85.76,86.87,93.09,83.73,84.49,87.37,89.13,83.2,83.77,93.68,93.09,88.59,87.88,87.89,89.38,89.13,89.58,90.22,91.44,91.04,92.1,97.54,99.12,100,99.68,100.08,99.9,99.63,99.45,99.63,99.46,96.91,97.65,102.1,103.57,104.59,104.79,101.31,104.8,104.56,104.15,102.73,101.86,101.9,102.33,105.71,106.1,102.81,103.23,102.35,104.11) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 86.86 75.01 71.97 83.73 89.13 99.63 104.56 [2,] 86.79 77.60 69.27 84.49 89.58 99.45 104.15 [3,] 82.52 77.81 74.13 87.37 90.22 99.63 102.73 [4,] 86.87 81.70 76.40 89.13 91.44 99.46 101.86 [5,] 81.62 76.47 72.26 83.20 91.04 96.91 101.90 [6,] 82.66 74.72 72.10 83.77 92.10 97.65 102.33 [7,] 89.87 84.43 87.82 93.68 97.54 102.10 105.71 [8,] 92.04 86.72 91.62 93.09 99.12 103.57 106.10 [9,] 79.74 70.99 82.69 88.59 100.00 104.59 102.81 [10,] 77.75 75.43 85.76 87.88 99.68 104.79 103.23 [11,] 79.12 74.14 86.87 87.89 100.08 101.31 102.35 [12,] 76.37 73.30 93.09 89.38 99.90 104.80 104.11 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 83.51750 77.36000 80.33167 87.68333 94.98583 101.15750 103.48667 > arr.sd [1] 4.948804 4.681960 8.544875 3.469423 4.705792 2.792588 1.434734 > arr.range [1] 15.67 15.73 23.82 10.48 10.95 7.89 4.24 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 18.7968 -0.1607 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) 18.725 -3.867 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 60.5138 -0.5327 > postscript(file="/var/fisher/rcomp/tmp/1hgpt1386100342.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2lz3r1386100342.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3kcte1386100342.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4jh0d1386100342.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5xv0z1386100342.tab") > > try(system("convert tmp/1hgpt1386100342.ps tmp/1hgpt1386100342.png",intern=TRUE)) character(0) > try(system("convert tmp/2lz3r1386100342.ps tmp/2lz3r1386100342.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.996 0.550 2.530