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Type 'q()' to quit R. > x <- c(2.57,2.58,2.58,2.58,2.57,2.57,2.57,2.57,2.59,2.62,2.66,2.67,2.67,2.69,2.69,2.69,2.69,2.71,2.71,2.71,2.74,2.77,2.82,2.82,2.82,2.8,2.82,2.82,2.82,2.82,2.82,2.82,2.85,2.93,2.94,2.94,2.95,2.95,2.96,2.96,2.97,2.97,2.97,2.97,2.98,3.03,3.03,3.03,3.03,3.04,3.05,3.06,3.06,3.07,3.07,3.07,3.04,3.06,3.09,3.09,3.09,3.09,3.1,3.1,3.1,3.1,3.1,3.11,3.11,3.17,3.19,3.19,3.19,3.19,3.19,3.19,3.19,3.19,3.19,3.19,3.25,3.23,3.24,3.24) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 2.57 2.67 2.82 2.95 3.03 3.09 3.19 [2,] 2.58 2.69 2.80 2.95 3.04 3.09 3.19 [3,] 2.58 2.69 2.82 2.96 3.05 3.10 3.19 [4,] 2.58 2.69 2.82 2.96 3.06 3.10 3.19 [5,] 2.57 2.69 2.82 2.97 3.06 3.10 3.19 [6,] 2.57 2.71 2.82 2.97 3.07 3.10 3.19 [7,] 2.57 2.71 2.82 2.97 3.07 3.10 3.19 [8,] 2.57 2.71 2.82 2.97 3.07 3.11 3.19 [9,] 2.59 2.74 2.85 2.98 3.04 3.11 3.25 [10,] 2.62 2.77 2.93 3.03 3.06 3.17 3.23 [11,] 2.66 2.82 2.94 3.03 3.09 3.19 3.24 [12,] 2.67 2.82 2.94 3.03 3.09 3.19 3.24 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 2.594167 2.725833 2.850000 2.980833 3.060833 3.120833 3.206667 > arr.sd [1] 0.03604501 0.05124954 0.05342795 0.03088346 0.01880925 0.03848455 0.02498484 > arr.range [1] 0.10 0.15 0.14 0.08 0.06 0.10 0.06 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.13240 -0.03276 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -0.4175 -2.7534 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 0.4054 -0.1046 > postscript(file="/var/wessaorg/rcomp/tmp/1aifl1386189780.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2eirg1386189780.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3g0l11386189780.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/46oz61386189780.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5o8ln1386189780.tab") > > try(system("convert tmp/1aifl1386189780.ps tmp/1aifl1386189780.png",intern=TRUE)) character(0) > try(system("convert tmp/2eirg1386189780.ps tmp/2eirg1386189780.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 2.349 0.513 2.828