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Type 'q()' to quit R. > x <- c(6.11,6.13,6.15,6.15,6.16,6.18,6.21,6.22,6.23,6.26,6.28,6.28,6.29,6.32,6.36,6.37,6.38,6.38,6.4,6.41,6.42,6.43,6.44,6.47,6.47,6.48,6.51,6.54,6.56,6.57,6.6,6.62,6.65,6.71,6.76,6.78,6.8,6.83,6.86,6.86,6.87,6.88,6.9,6.92,6.93,6.94,6.96,6.98,6.99,7.01,7.06,7.07,7.08,7.08,7.1,7.11,7.22,7.24,7.25,7.26,7.27,7.3,7.32,7.34,7.35,7.36,7.39,7.41,7.43,7.46,7.47,7.5,7.51,7.52,7.58,7.59,7.63,7.64,7.64,7.66,7.67,7.68,7.69,7.7) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 6.11 6.29 6.47 6.80 6.99 7.27 7.51 [2,] 6.13 6.32 6.48 6.83 7.01 7.30 7.52 [3,] 6.15 6.36 6.51 6.86 7.06 7.32 7.58 [4,] 6.15 6.37 6.54 6.86 7.07 7.34 7.59 [5,] 6.16 6.38 6.56 6.87 7.08 7.35 7.63 [6,] 6.18 6.38 6.57 6.88 7.08 7.36 7.64 [7,] 6.21 6.40 6.60 6.90 7.10 7.39 7.64 [8,] 6.22 6.41 6.62 6.92 7.11 7.41 7.66 [9,] 6.23 6.42 6.65 6.93 7.22 7.43 7.67 [10,] 6.26 6.43 6.71 6.94 7.24 7.46 7.68 [11,] 6.28 6.44 6.76 6.96 7.25 7.47 7.69 [12,] 6.28 6.47 6.78 6.98 7.26 7.50 7.70 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 6.196667 6.389167 6.604167 6.894167 7.122500 7.383333 7.625833 > arr.sd [1] 0.05851703 0.05071459 0.10370047 0.05384461 0.09516732 0.07215304 0.06331140 > arr.range [1] 0.17 0.18 0.31 0.18 0.27 0.23 0.19 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.029670 0.006009 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -4.239 0.810 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 0.12155 0.01409 > postscript(file="/var/fisher/rcomp/tmp/17k2r1386264520.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2i3pr1386264520.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3r88h1386264520.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4zfzb1386264520.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5lbe71386264520.tab") > > try(system("convert tmp/17k2r1386264520.ps tmp/17k2r1386264520.png",intern=TRUE)) character(0) > try(system("convert tmp/2i3pr1386264520.ps tmp/2i3pr1386264520.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.777 0.498 2.247