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Type 'q()' to quit R. > x <- c(1.41,1.42,1.43,1.43,1.43,1.43,1.43,1.44,1.44,1.45,1.46,1.46,1.47,1.47,1.47,1.49,1.49,1.49,1.49,1.5,1.52,1.54,1.56,1.56,1.57,1.58,1.59,1.6,1.59,1.6,1.61,1.61,1.61,1.62,1.62,1.61,1.62,1.62,1.63,1.64,1.64,1.64,1.64,1.64,1.65,1.65,1.65,1.65,1.65,1.66,1.66,1.67,1.67,1.67,1.67,1.67,1.67,1.69,1.69,1.69,1.7,1.71,1.72,1.71,1.71,1.71,1.72,1.72,1.72,1.73,1.73,1.73,1.74,1.74,1.75,1.76,1.76,1.77,1.78,1.79,1.8,1.8,1.8,1.81) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 1.41 1.47 1.57 1.62 1.65 1.70 1.74 [2,] 1.42 1.47 1.58 1.62 1.66 1.71 1.74 [3,] 1.43 1.47 1.59 1.63 1.66 1.72 1.75 [4,] 1.43 1.49 1.60 1.64 1.67 1.71 1.76 [5,] 1.43 1.49 1.59 1.64 1.67 1.71 1.76 [6,] 1.43 1.49 1.60 1.64 1.67 1.71 1.77 [7,] 1.43 1.49 1.61 1.64 1.67 1.72 1.78 [8,] 1.44 1.50 1.61 1.64 1.67 1.72 1.79 [9,] 1.44 1.52 1.61 1.65 1.67 1.72 1.80 [10,] 1.45 1.54 1.62 1.65 1.69 1.73 1.80 [11,] 1.46 1.56 1.62 1.65 1.69 1.73 1.80 [12,] 1.46 1.56 1.61 1.65 1.69 1.73 1.81 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 1.435833 1.504167 1.600833 1.639167 1.671667 1.717500 1.775000 > arr.sd [1] 0.015050420 0.033154825 0.015642793 0.010836247 0.012673045 0.009653073 [7] 0.025045413 > arr.range [1] 0.05 0.09 0.05 0.03 0.04 0.03 0.07 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean 0.04242 -0.01542 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -3.458 -1.420 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean 0.13584 -0.05209 > postscript(file="/var/fisher/rcomp/tmp/1gaub1386271912.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2qt801386271912.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/fisher/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/3sgp41386271912.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/4ez781386271912.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/fisher/rcomp/tmp/5rnjd1386271912.tab") > > try(system("convert tmp/1gaub1386271912.ps tmp/1gaub1386271912.png",intern=TRUE)) character(0) > try(system("convert tmp/2qt801386271912.ps tmp/2qt801386271912.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.771 0.492 2.234