R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: i686-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(5.53,5.53,5.53,5.53,5.53,5.53,5.53,5.53,5.53,5.67,5.67,5.67,5.67,5.67,5.67,5.67,5.67,5.67,5.67,5.67,5.67,5.89,5.89,5.89,5.89,5.89,5.89,5.89,5.89,5.89,5.89,5.89,5.89,6.08,6.08,6.08,6.08,6.08,6.08,6.08,6.08,6.08,6.08,6.08,6.08,6.28,6.28,6.28,6.28,6.28,6.28,6.28,6.28,6.28,6.28,6.28,6.28,6.31,6.31,6.31,6.31,6.31,6.31,6.31,6.31,6.31,6.31,6.31,6.31,6.48,6.48,6.48,6.48,6.48,6.48,6.48,6.48,6.48,6.48,6.48,6.48,6.5,6.5,6.5) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 7 7 7 7 7 7 7 7 7 7 7 7 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [2,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [3,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [4,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [5,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [6,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [7,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [8,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [9,] 5.53 5.67 5.89 6.08 6.28 6.31 6.48 NA [10,] 5.67 5.89 6.08 6.28 6.31 6.48 6.50 NA [11,] 5.67 5.89 6.08 6.28 6.31 6.48 6.50 NA [12,] 5.67 5.89 6.08 6.28 6.31 6.48 6.50 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/fisher/rcomp/tmp/19tbl1386276942.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/24fua1386276942.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/31ufb1386276942.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/4iym41386276942.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 5.530 5.530 5.530 5.530 5.530 5.530 5.530 5.530 5.530 5.670 5.670 5.670 [2,] 5.780 5.780 5.780 5.780 5.780 5.780 5.780 5.780 5.780 5.985 5.985 5.985 [3,] 6.080 6.080 6.080 6.080 6.080 6.080 6.080 6.080 6.080 6.280 6.280 6.280 [4,] 6.295 6.295 6.295 6.295 6.295 6.295 6.295 6.295 6.295 6.395 6.395 6.395 [5,] 6.480 6.480 6.480 6.480 6.480 6.480 6.480 6.480 6.480 6.500 6.500 6.500 $n [1] 7 7 7 7 7 7 7 7 7 7 7 7 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [1,] 5.77245 5.77245 5.77245 5.77245 5.77245 5.77245 5.77245 5.77245 5.77245 [2,] 6.38755 6.38755 6.38755 6.38755 6.38755 6.38755 6.38755 6.38755 6.38755 [,10] [,11] [,12] [1,] 6.035155 6.035155 6.035155 [2,] 6.524845 6.524845 6.524845 $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(5.53, 5.78, 6.08, 6.295, 6.48, 5.53, 5.78, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/5hiqn1386276942.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 5.53 5.67 5.890 6.08 6.280 6.310 6.48 NA [2,] 5.53 5.67 5.890 6.08 6.280 6.310 6.48 NA [3,] 5.53 5.67 5.890 6.08 6.280 6.310 6.48 NA [4,] 5.60 5.78 5.985 6.18 6.295 6.395 6.49 NA [5,] 5.67 5.89 6.080 6.28 6.310 6.480 6.50 NA $n [1] 12 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 5.498073 5.619828 5.84667 6.034389 6.273158 6.271231 6.475439 NA [2,] 5.561927 5.720172 5.93333 6.125611 6.286842 6.348769 6.484561 NA $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" "7" NA Warning message: In bxp(list(stats = c(5.53, 5.53, 5.53, 5.6, 5.67, 5.67, 5.67, 5.67, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/6f5071386276942.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 0.3090693 0.83 0.4100 [2,] 0.3307177 0.89 0.4625 [3,] 0.3523662 0.95 0.5150 [4,] 0.3523662 0.95 0.5150 [5,] 0.3523662 0.95 0.5150 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 0.3424922 0.9226336 0.4910544 [2,] 0.3622402 0.9773664 0.5389456 $out numeric(0) $group numeric(0) $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(0.309069263311332, 0.330717707433325, 0.352366151555317, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/19tbl1386276942.ps tmp/19tbl1386276942.png",intern=TRUE)) character(0) > try(system("convert tmp/24fua1386276942.ps tmp/24fua1386276942.png",intern=TRUE)) character(0) > try(system("convert tmp/31ufb1386276942.ps tmp/31ufb1386276942.png",intern=TRUE)) character(0) > try(system("convert tmp/4iym41386276942.ps tmp/4iym41386276942.png",intern=TRUE)) character(0) > try(system("convert tmp/5hiqn1386276942.ps tmp/5hiqn1386276942.png",intern=TRUE)) character(0) > try(system("convert tmp/6f5071386276942.ps tmp/6f5071386276942.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 5.693 1.331 7.020