R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: i686-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > x <- c(1.49,1.55,1.57,1.6,1.61,1.68,1.72,1.72,1.73,1.74,1.74,1.75,1.75,1.75,1.75,1.76,1.76,1.77,1.78,1.78,1.78,1.78,1.78,1.79,1.79,1.79,1.79,1.79,1.79,1.8,1.8,1.8,1.8,1.8,1.81,1.81,1.82,1.82,1.82,1.82,1.83,1.83,1.84,1.84,1.84,1.85,1.85,1.85,1.86,1.86,1.86,1.86,1.87,1.87,1.87,1.87,1.88,1.9,1.9,1.91,1.91,1.91,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.93,1.93,1.93,1.94,1.95,1.95,1.95,1.95,1.98,1.98,2.01,2.02,2.11,2.14) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 7 7 7 7 7 7 7 7 7 7 7 7 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 1.49 1.75 1.79 1.82 1.86 1.91 1.93 NA [2,] 1.55 1.75 1.79 1.82 1.86 1.91 1.94 NA [3,] 1.57 1.75 1.79 1.82 1.86 1.92 1.95 NA [4,] 1.60 1.76 1.79 1.82 1.86 1.92 1.95 NA [5,] 1.61 1.76 1.79 1.83 1.87 1.92 1.95 NA [6,] 1.68 1.77 1.80 1.83 1.87 1.92 1.95 NA [7,] 1.72 1.78 1.80 1.84 1.87 1.92 1.98 NA [8,] 1.72 1.78 1.80 1.84 1.87 1.92 1.98 NA [9,] 1.73 1.78 1.80 1.84 1.88 1.92 2.01 NA [10,] 1.74 1.78 1.80 1.85 1.90 1.92 2.02 NA [11,] 1.74 1.78 1.81 1.85 1.90 1.93 2.11 NA [12,] 1.75 1.79 1.81 1.85 1.91 1.93 2.14 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/fisher/rcomp/tmp/1axtl1387735693.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/26npw1387735693.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/3xkco1387735693.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/4wd7o1387735693.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 1.750 1.750 1.75 1.760 1.610 1.680 1.720 1.720 1.73 1.74 1.740 1.75 [2,] 1.770 1.770 1.77 1.775 1.775 1.785 1.790 1.790 1.79 1.79 1.795 1.80 [3,] 1.820 1.820 1.82 1.820 1.830 1.830 1.840 1.840 1.84 1.85 1.850 1.85 [4,] 1.885 1.885 1.89 1.890 1.895 1.895 1.895 1.895 1.90 1.91 1.915 1.92 [5,] 1.930 1.940 1.95 1.950 1.950 1.950 1.980 1.980 2.01 2.02 1.930 1.93 $n [1] 7 7 7 7 7 7 7 7 7 7 7 7 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 1.751324 1.751324 1.748338 1.751324 1.758338 1.76431 1.777296 1.777296 [2,] 1.888676 1.888676 1.891662 1.888676 1.901662 1.89569 1.902704 1.902704 [,9] [,10] [,11] [,12] [1,] 1.77431 1.778338 1.778338 1.778338 [2,] 1.90569 1.921662 1.921662 1.921662 $out [1] 1.49 1.55 1.57 1.60 2.11 2.14 $group [1] 1 2 3 4 11 12 $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(1.75, 1.77, 1.82, 1.885, 1.93, 1.75, 1.77, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/51ewa1387735693.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 1.490 1.750 1.79 1.820 1.86 1.92 1.930 NA [2,] 1.585 1.755 1.79 1.820 1.86 1.92 1.950 NA [3,] 1.700 1.775 1.80 1.835 1.87 1.92 1.965 NA [4,] 1.735 1.780 1.80 1.845 1.89 1.92 2.015 NA [5,] 1.750 1.790 1.81 1.850 1.91 1.92 2.110 NA $n [1] 12 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 1.631584 1.763597 1.795439 1.823597 1.856317 1.92 1.935353 NA [2,] 1.768416 1.786403 1.804561 1.846403 1.883683 1.92 1.994647 NA $out [1] 1.91 1.91 1.93 1.93 2.14 $group [1] 6 6 6 6 7 $names [1] "1" "2" "3" "4" "5" "6" "7" NA Warning message: In bxp(list(stats = c(1.49, 1.585, 1.7, 1.735, 1.75, 1.75, 1.755, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/6pee21387735693.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 0.08791229 0.260 0.105 [2,] 0.09325585 0.275 0.110 [3,] 0.11519628 0.345 0.115 [4,] 0.12799693 0.385 0.120 [5,] 0.14795430 0.440 0.120 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 0.09935064 0.2948283 0.1104389 [2,] 0.13104192 0.3951717 0.1195611 $out numeric(0) $group numeric(0) $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(0.0879122939558025, 0.0932558461404028, 0.115196279781685, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/1axtl1387735693.ps tmp/1axtl1387735693.png",intern=TRUE)) character(0) > try(system("convert tmp/26npw1387735693.ps tmp/26npw1387735693.png",intern=TRUE)) character(0) > try(system("convert tmp/3xkco1387735693.ps tmp/3xkco1387735693.png",intern=TRUE)) character(0) > try(system("convert tmp/4wd7o1387735693.ps tmp/4wd7o1387735693.png",intern=TRUE)) character(0) > try(system("convert tmp/51ewa1387735693.ps tmp/51ewa1387735693.png",intern=TRUE)) character(0) > try(system("convert tmp/6pee21387735693.ps tmp/6pee21387735693.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 6.593 1.631 8.177