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Type 'q()' to quit R. > x <- c(125,123,117,114,111,112,144,150,149,134,123,116,117,111,105,102,95,93,124,130,124,115,106,105,105,101,95,93,84,87,116,120,117,109,105,107,109,109,108,107,99,103,131,137,135,124,118,121,121,118,113,107,100,102,130,136,133,120,112,109,110,106,102,98,92,92,120,127,124,114,108,106,111,110,104,100,96,98,122,134,133,125,118,116) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P., (2012), Standard Deviation Plot (v1.0.2) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_sdplot.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np+1)) > ari <- array(0,dim=par1) > j <- 0 > for (i in 1:n) + { + j = j + 1 + ari[j] = ari[j] + 1 + arr[j,ari[j]] <- x[i] + if (j == par1) j = 0 + } > ari [1] 7 7 7 7 7 7 7 7 7 7 7 7 > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 125 117 105 109 121 110 111 NA [2,] 123 111 101 109 118 106 110 NA [3,] 117 105 95 108 113 102 104 NA [4,] 114 102 93 107 107 98 100 NA [5,] 111 95 84 99 100 92 96 NA [6,] 112 93 87 103 102 92 98 NA [7,] 144 124 116 131 130 120 122 NA [8,] 150 130 120 137 136 127 134 NA [9,] 149 124 117 135 133 124 133 NA [10,] 134 115 109 124 120 114 125 NA [11,] 123 106 105 118 112 108 118 NA [12,] 116 105 107 121 109 106 116 NA > arr.sd <- array(NA,dim=par1) > arr.range <- array(NA,dim=par1) > arr.iqr <- array(NA,dim=par1) > for (j in 1:par1) + { + arr.sd[j] <- sqrt(var(arr[j,],na.rm=TRUE)) + arr.range[j] <- max(arr[j,],na.rm=TRUE) - min(arr[j,],na.rm=TRUE) + arr.iqr[j] <- quantile(arr[j,],0.75,na.rm=TRUE) - quantile(arr[j,],0.25,na.rm=TRUE) + } > overall.sd <- sqrt(var(x)) > overall.range <- max(x) - min(x) > overall.iqr <- quantile(x,0.75) - quantile(x,0.25) > postscript(file="/var/fisher/rcomp/tmp/1ovyk1387739794.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.sd,type='b',ylab='S.D.',main='Standard Deviation Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.sd,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/2ulaz1387739794.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.range,type='b',ylab='range',main='Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.range,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/3g8211387739794.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.iqr,type='b',ylab='IQR',main='Interquartile Range Plot',xlab='Periodic Index') > mtext(paste('# blocks = ',np)) > abline(overall.iqr,0) > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/45k1d1387739794.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(t(arr)) > names(z) <- c(1:par1) > (boxplot(z,notch=TRUE,col='grey',xlab='Periodic Index',ylab='Value',main='Notched Box Plots - Periodic Subseries')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [1,] 105.0 101.0 95.0 93 92.0 87.0 116.0 120.0 117 109.0 105 105.0 [2,] 109.5 107.5 103.0 99 93.5 92.5 121.0 128.5 124 114.5 107 106.5 [3,] 111.0 110.0 105.0 102 96.0 98.0 124.0 134.0 133 120.0 112 109.0 [4,] 119.0 114.5 110.5 107 99.5 102.5 130.5 136.5 134 124.5 118 116.0 [5,] 125.0 123.0 117.0 114 100.0 112.0 144.0 137.0 149 134.0 123 121.0 $n [1] 7 7 7 7 7 7 7 7 7 7 7 7 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 105.3268 105.8197 100.5211 97.22253 92.4169 92.02816 118.3268 129.2225 [2,] 116.6732 114.1803 109.4789 106.77747 99.5831 103.97184 129.6732 138.7775 [,9] [,10] [,11] [,12] [1,] 127.0282 114.0282 105.431 103.3268 [2,] 138.9718 125.9718 118.569 114.6732 $out [1] 111 84 150 $group [1] 5 5 8 $names [1] "1" "2" "3" "4" "5" "6" "7" "8" "9" "10" "11" "12" Warning message: In bxp(list(stats = c(105, 109.5, 111, 119, 125, 101, 107.5, 110, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/5to2q1387739794.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(arr) > names(z) <- c(1:np) > (boxplot(z,notch=TRUE,col='grey',xlab='Block Index',ylab='Value',main='Notched Box Plots - Sequential Blocks')) $stats [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 111 93.0 84.0 99.0 100.0 92 96.0 NA [2,] 115 103.5 94.0 107.5 108.0 100 102.0 NA [3,] 123 108.5 105.0 113.5 115.5 107 113.5 NA [4,] 139 120.5 112.5 127.5 125.5 117 123.5 NA [5,] 150 130.0 120.0 137.0 136.0 127 134.0 NA $n [1] 12 12 12 12 12 12 12 0 $conf [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [1,] 112.0534 100.7462 96.56203 104.3779 107.5181 99.24619 103.6937 NA [2,] 133.9466 116.2538 113.43797 122.6221 123.4819 114.75381 123.3063 NA $out numeric(0) $group numeric(0) $names [1] "1" "2" "3" "4" "5" "6" "7" NA Warning message: In bxp(list(stats = c(111, 115, 123, 139, 150, 93, 103.5, 108.5, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > postscript(file="/var/fisher/rcomp/tmp/67x0p1387739794.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > z <- data.frame(cbind(arr.sd,arr.range,arr.iqr)) > names(z) <- list('S.D.','Range','IQR') > (boxplot(z,notch=TRUE,col='grey',ylab='Overall Variability',main='Notched Box Plots')) $stats [,1] [,2] [,3] [1,] 6.187545 16.0 6.00 [2,] 7.063229 20.5 7.75 [3,] 7.787966 23.5 9.50 [4,] 8.820828 27.5 10.00 [5,] 10.339476 32.0 11.00 $n [1] 12 12 12 $conf [,1] [,2] [,3] [1,] 6.986313 20.30725 8.47376 [2,] 8.589619 26.69275 10.52624 $out numeric(0) $group numeric(0) $names [1] "S.D." "Range" "IQR" Warning message: In bxp(list(stats = c(6.18754509363078, 7.06322914059299, 7.78796604314787, : some notches went outside hinges ('box'): maybe set notch=FALSE > dev.off() null device 1 > > try(system("convert tmp/1ovyk1387739794.ps tmp/1ovyk1387739794.png",intern=TRUE)) character(0) > try(system("convert tmp/2ulaz1387739794.ps tmp/2ulaz1387739794.png",intern=TRUE)) character(0) > try(system("convert tmp/3g8211387739794.ps tmp/3g8211387739794.png",intern=TRUE)) character(0) > try(system("convert tmp/45k1d1387739794.ps tmp/45k1d1387739794.png",intern=TRUE)) character(0) > try(system("convert tmp/5to2q1387739794.ps tmp/5to2q1387739794.png",intern=TRUE)) character(0) > try(system("convert tmp/67x0p1387739794.ps tmp/67x0p1387739794.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 6.709 1.630 8.402