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Type 'q()' to quit R. > x <- c(6.35,6.33,6.36,6.37,6.33,6.34,6.42,6.42,6.48,6.47,6.5,6.52,6.49,6.51,6.52,6.54,6.59,6.6,6.59,6.58,6.55,6.57,6.61,6.61,6.64,6.59,6.67,6.58,6.66,6.7,6.65,6.65,6.73,6.74,6.74,6.71,6.78,6.83,6.8,6.84,6.81,6.75,6.8,6.84,6.8,6.84,6.79,6.8,6.68,6.82,6.85,6.85,6.85,6.92,6.91,6.94,6.99,7.05,6.98,6.91,6.98,7.06,7.05,6.95,7.09,7.15,7.1,7.2,7.26,7.26,7.24,7.26,7.26,7.3,7.21,7.23,7.33,7.33,7.31,7.3,7.35,7.4,7.43,7.42) > par1 = '12' > par1 <- '12' > #'GNU S' R Code compiled by R2WASP v. 1.2.291 () > #Author: root > #To cite this work: Wessa P. (2012), Standard Deviation-Mean Plot (v1.0.6) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_smp.wasp/ > #Source of accompanying publication: Office for Research, Development, and Education > # > par1 <- as.numeric(par1) > (n <- length(x)) [1] 84 > (np <- floor(n / par1)) [1] 7 > arr <- array(NA,dim=c(par1,np)) > j <- 0 > k <- 1 > for (i in 1:(np*par1)) + { + j = j + 1 + arr[j,k] <- x[i] + if (j == par1) { + j = 0 + k=k+1 + } + } > arr [,1] [,2] [,3] [,4] [,5] [,6] [,7] [1,] 6.35 6.49 6.64 6.78 6.68 6.98 7.26 [2,] 6.33 6.51 6.59 6.83 6.82 7.06 7.30 [3,] 6.36 6.52 6.67 6.80 6.85 7.05 7.21 [4,] 6.37 6.54 6.58 6.84 6.85 6.95 7.23 [5,] 6.33 6.59 6.66 6.81 6.85 7.09 7.33 [6,] 6.34 6.60 6.70 6.75 6.92 7.15 7.33 [7,] 6.42 6.59 6.65 6.80 6.91 7.10 7.31 [8,] 6.42 6.58 6.65 6.84 6.94 7.20 7.30 [9,] 6.48 6.55 6.73 6.80 6.99 7.26 7.35 [10,] 6.47 6.57 6.74 6.84 7.05 7.26 7.40 [11,] 6.50 6.61 6.74 6.79 6.98 7.24 7.43 [12,] 6.52 6.61 6.71 6.80 6.91 7.26 7.42 > arr.mean <- array(NA,dim=np) > arr.sd <- array(NA,dim=np) > arr.range <- array(NA,dim=np) > for (j in 1:np) + { + arr.mean[j] <- mean(arr[,j],na.rm=TRUE) + arr.sd[j] <- sd(arr[,j],na.rm=TRUE) + arr.range[j] <- max(arr[,j],na.rm=TRUE) - min(arr[,j],na.rm=TRUE) + } > arr.mean [1] 6.407500 6.563333 6.671667 6.806667 6.895833 7.133333 7.322500 > arr.sd [1] 0.07021072 0.04075053 0.05407626 0.02741378 0.09596006 0.11146409 0.07021072 > arr.range [1] 0.19 0.12 0.16 0.09 0.37 0.31 0.22 > (lm1 <- lm(arr.sd~arr.mean)) Call: lm(formula = arr.sd ~ arr.mean) Coefficients: (Intercept) arr.mean -0.21739 0.04167 > (lnlm1 <- lm(log(arr.sd)~log(arr.mean))) Call: lm(formula = log(arr.sd) ~ log(arr.mean)) Coefficients: (Intercept) log(arr.mean) -10.596 4.063 > (lm2 <- lm(arr.range~arr.mean)) Call: lm(formula = arr.range ~ arr.mean) Coefficients: (Intercept) arr.mean -0.7805 0.1448 > postscript(file="/var/wessaorg/rcomp/tmp/1avqk1388347401.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.sd,main='Standard Deviation-Mean Plot',xlab='mean',ylab='standard deviation') > dev.off() null device 1 > postscript(file="/var/wessaorg/rcomp/tmp/2hdys1388347401.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > plot(arr.mean,arr.range,main='Range-Mean Plot',xlab='mean',ylab='range') > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Standard Deviation-Mean Plot',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Section',header=TRUE) > a<-table.element(a,'Mean',header=TRUE) > a<-table.element(a,'Standard Deviation',header=TRUE) > a<-table.element(a,'Range',header=TRUE) > a<-table.row.end(a) > for (j in 1:np) { + a<-table.row.start(a) + a<-table.element(a,j,header=TRUE) + a<-table.element(a,arr.mean[j]) + a<-table.element(a,arr.sd[j] ) + a<-table.element(a,arr.range[j] ) + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3mpet1388347401.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: S.E.(k) = alpha + beta * Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/4dycy1388347401.tab") > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Regression: ln S.E.(k) = alpha + beta * ln Mean(k)',2,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'alpha',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[1]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'beta',header=TRUE) > a<-table.element(a,lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'S.D.',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,2]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'T-STAT',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,3]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'p-value',header=TRUE) > a<-table.element(a,summary(lnlm1)$coefficients[2,4]) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Lambda',header=TRUE) > a<-table.element(a,1-lnlm1$coefficients[[2]]) > a<-table.row.end(a) > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5qvg91388347401.tab") > > try(system("convert tmp/1avqk1388347401.ps tmp/1avqk1388347401.png",intern=TRUE)) character(0) > try(system("convert tmp/2hdys1388347401.ps tmp/2hdys1388347401.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.810 0.378 2.156