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Type 'q()' to quit R. > x <- array(list(37,21,20,25,85,38,25,48,43,18,19,22,68,37,27,49,30,12,18,15,57,33,23,37,87,38,29,60,15,35,22,30,72,41,36,55,40,35,21,27,60,34,20,47,54,29,26,43,79,31,35,50,56,32,28,45,35,25,29,27,53,28,24,39,75,39,31,52,70,35,26,53,79,31,24,60,31,42,19,20,17,40,22,32,82,41,31,58,59,40,27,41,26,25,15,17,54,39,24,33,27,19,19,20,62,45,29,44,79,47,28,56,26,30,10,18,69,33,29,59),dim=c(4,30),dimnames=list(c('SocS','Temp','Home','Dev'),1:30)) > y <- array(NA,dim=c(4,30),dimnames=list(c('SocS','Temp','Home','Dev'),1:30)) > for (i in 1:dim(x)[1]) + { + for (j in 1:dim(x)[2]) + { + y[i,j] <- as.numeric(x[i,j]) + } + } > par3 = '0' > par2 = 'TRUE' > par1 = '3' > ylab = 'Test Scores' > xlab = 'CARE Variable Names' > main = 'CARE DATA' > par3 <- '0' > par2 <- 'TRUE' > par1 <- '3' > par1 <- as.numeric(par1) #colour > par2<- as.logical(par2) # Notches ? > par3<-as.numeric(par3) # % trim > if(par3>45){par3<-45;warning('trim limited to 45%')} > if(par3<0){par3<-0;warning('negative trim makes no sense. Trim is zero.')} > lotrm<-as.integer(length(y[1,])*par3/100)+1 > hitrm<-as.integer(length(y[1,])*(100-par3)/100) > y1<-array(dim=c(dim(y)[1], hitrm-lotrm+1), dimnames=list(dimnames(y)[[1]], 1:(hitrm-lotrm+1) )) > for(i in 1:dim(y)[1]){ + tmp<-order(y[i,]) + y1[i,]<- y[i, tmp[lotrm:hitrm] ] + } > postscript(file="/var/wessaorg/rcomp/tmp/13g211359905523.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > pairs(t(y)) > dev.off() null device 1 > y<-y1 > z <- as.data.frame(t(y)) > postscript(file="/var/wessaorg/rcomp/tmp/27g3q1359905523.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) > (r<-boxplot(z ,xlab=xlab,ylab=ylab,main=main,notch=par2,col=par1)) $stats [,1] [,2] [,3] [,4] [1,] 15.0 18.0 10.0 15 [2,] 35.0 29.0 20.0 27 [3,] 56.5 34.5 24.5 42 [4,] 72.0 39.0 29.0 52 [5,] 87.0 47.0 36.0 60 $n [1] 30 30 30 30 $conf [,1] [,2] [,3] [,4] [1,] 45.82671 31.61533 21.9038 34.78832 [2,] 67.17329 37.38467 27.0962 49.21168 $out [1] 12 $group [1] 2 $names [1] "SocS" "Temp" "Home" "Dev" > dev.off() null device 1 > > #Note: the /var/wessaorg/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab > load(file="/var/wessaorg/rcomp/createtable") > > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,hyperlink('http://www.xycoon.com/overview.htm','Boxplot statistics','Boxplot overview'),6,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Variable',1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/lower_whisker.htm','lower whisker','definition of lower whisker'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/lower_hinge.htm','lower hinge','definition of lower hinge'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/central_tendency.htm','median','definitions about measures of central tendency'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/upper_hinge.htm','upper hinge','definition of upper hinge'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/upper_whisker.htm','upper whisker','definition of upper whisker'),1,TRUE) > a<-table.row.end(a) > for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + for (j in 1:5) + { + a<-table.element(a,signif(r$stats[j,i], digits=4)) + } + a<-table.row.end(a) + } > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/3gyv01359905523.tab") > if (par2){ + a<-table.start() + a<-table.row.start(a) + a<-table.element(a,'Boxplot Notches',4,TRUE) + a<-table.row.end(a) + a<-table.row.start(a) + a<-table.element(a,'Variable',1,TRUE) + a<-table.element(a,'lower bound',1,TRUE) + a<-table.element(a,'median',1,TRUE) + a<-table.element(a,'upper bound',1,TRUE) + a<-table.row.end(a) + for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + a<-table.element(a,signif(r$conf[1,i], digits=4)) + a<-table.element(a, signif(r$stats[3,i], digits=4)) + a<-table.element(a,signif(r$conf[2,i], digits=4)) + a<-table.row.end(a) + } + a<-table.end(a) + table.save(a,file="/var/wessaorg/rcomp/tmp/4o0am1359905523.tab") + } > a<-table.start() > a<-table.row.start(a) > a<-table.element(a,'Boxplot Means',4,TRUE) > a<-table.row.end(a) > a<-table.row.start(a) > a<-table.element(a,'Variable',1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/trimmed_mean.htm','trimmed mean','definition of trimmed mean'),1,TRUE) > a<-table.element(a,hyperlink('http://www.xycoon.com/unbiased1.htm','unbiased SD','definition of unbiased SD'),1,TRUE) > a<-table.row.end(a) > for (i in 1:length(y[,1])) + { + a<-table.row.start(a) + a<-table.element(a,dimnames(t(x))[[2]][i],1,TRUE) + a<-table.element(a,signif(mean(z[i], trim=par3/100, na.rm=TRUE), digits=4)) + a<-table.element(a,signif(sd(z[i], na.rm=TRUE), digits=4)) + a<-table.row.end(a) + } Warning messages: 1: mean() is deprecated. Use colMeans() or sapply(*, mean) instead. 2: sd() is deprecated. Use sapply(*, sd) instead. 3: mean() is deprecated. Use colMeans() or sapply(*, mean) instead. 4: sd() is deprecated. Use sapply(*, sd) instead. 5: mean() is deprecated. Use colMeans() or sapply(*, mean) instead. 6: sd() is deprecated. Use sapply(*, sd) instead. 7: mean() is deprecated. Use colMeans() or sapply(*, mean) instead. 8: sd() is deprecated. Use sapply(*, sd) instead. > a<-table.end(a) > table.save(a,file="/var/wessaorg/rcomp/tmp/5krii1359905523.tab") > > try(system("convert tmp/13g211359905523.ps tmp/13g211359905523.png",intern=TRUE)) character(0) > try(system("convert tmp/27g3q1359905523.ps tmp/27g3q1359905523.png",intern=TRUE)) character(0) > > > proc.time() user system elapsed 1.298 0.219 1.549