R version 2.15.3 (2013-03-01) -- "Security Blanket"
Copyright (C) 2013 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i686-pc-linux-gnu (32-bit)

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> y <- c(4.59511985
+ ,4.543294782
+ ,4.382026635
+ ,4.248495242
+ ,4.605170186
+ ,4.691347882
+ ,4.127134385
+ ,4.394449155
+ ,4.304065093
+ ,4.795790546
+ ,4.605170186
+ ,4.290459441
+ ,4.477336814
+ ,4.465908119
+ ,4.290459441
+ ,4.17438727
+ ,4.48863637
+ ,4.454347296
+ ,4.983606622
+ ,4.672828834
+ ,4.060443011
+ ,4.48863637
+ ,4.304065093
+ ,4.990432587
+ ,4.406719247
+ ,4.510859507
+ ,4.532599493
+ ,4.875197323
+ ,4.477336814
+ ,4.672828834
+ ,4.143134726
+ ,4.905274778
+ ,4.304065093
+ ,4.406719247
+ ,4.262679877
+ ,4.828313737
+ ,4.189654742
+ ,4.442651256
+ ,4.521788577
+ ,4.304065093
+ ,4.477336814
+ ,4.127134385
+ ,4.510859507
+ ,4.59511985
+ ,4.795790546
+ ,4.564348191
+ ,4.553876892
+ ,4.615120517
+ ,4.465908119
+ ,4.369447852
+ ,4.219507705
+ ,4.624972813
+ ,4.553876892
+ ,4.356708827
+ ,4.762173935
+ ,4.564348191
+ ,4.532599493
+ ,4.110873864
+ ,4.110873864
+ ,4.382026635
+ ,4.394449155
+ ,4.369447852
+ ,4.406719247
+ ,4.718498871
+ ,4.624972813
+ ,4.543294782
+ ,4.59511985
+ ,4.317488114
+ ,4.905274778
+ ,4.394449155
+ ,4.356708827
+ ,4.624972813
+ ,4.454347296
+ ,4.418840608
+ ,4.709530201
+ ,4.276666119
+ ,4.454347296
+ ,4.615120517
+ ,4.382026635
+ ,4.709530201
+ ,4.343805422
+ ,4.430816799
+ ,4.418840608
+ ,4.17438727
+ ,4.605170186
+ ,4.521788577
+ ,4.663439094
+ ,4.248495242
+ ,4.49980967
+ ,4.510859507
+ ,4.59511985
+ ,4.770684624
+ ,4.189654742
+ ,4.343805422
+ ,4.430816799
+ ,4.615120517
+ ,4.158883083
+ ,4.477336814
+ ,4.418840608
+ ,4.65396035
+ ,4.844187086
+ ,4.356708827
+ ,4.248495242
+ ,4.691347882
+ ,4.644390899
+ ,4.454347296
+ ,4.574710979)
> x <- c(30,27,9,20,3,15,5,10,23,34,20,17,26,16,17,15,38,16,38,15,5,18,8,33,12,22,23,45,8,45,9,45,21,16,17,31,15,22,14,13,37,23,22,15,43,27,21,36,38,12,1,25,20,11,55,39,24,2,3,16,45,24,12,34,43,18,18,34,29,15,6,58,37,13,12,9,20,29,13,36,33,23,22,1,3,15,13,44,11,20,28,14,7,8,9,33,4,22,7,14,24,13,30,19,34,9,27)
> par2 = 'two.sided'
> par1 = 'pearson'
> ylab = 'lnStress'
> xlab = 'Stress'
> par2 <- 'two.sided'
> par1 <- 'pearson'
> #'GNU S' R Code compiled by R2WASP v. 1.2.291 ()
> #Author: root
> #To cite this work: Ian E. Holliday, 2012, Pregnancy and Cognition (v1.0.3) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_Pregnancy%20and%20cognition.wasp/
> #Source of accompanying publication: 
> #
> postscript(file="/var/fisher/rcomp/tmp/1ca8d1369219651.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) 
> plot(x,y, xlab=xlab, ylab=ylab)
> abline(coef=(lm(y ~ x))$coeff, col='red')
> ctp<-cor.test(x, y, use='pair', method='pearson')
> legend('bottomright', c('cor =', as.character(round(ctp$estimate, digits=4))))
> dev.off()
null device 
          1 
> (sw1<-shapiro.test(x))

	Shapiro-Wilk normality test

data:  x 
W = 0.9601, p-value = 0.002709

> (sw2<-shapiro.test(y))

	Shapiro-Wilk normality test

data:  y 
W = 0.989, p-value = 0.5373

> (cxy<-cor.test(x, y, method=par1))

	Pearson's product-moment correlation

data:  x and y 
t = 6.3818, df = 105, p-value = 4.827e-09
alternative hypothesis: true correlation is not equal to 0 
95 percent confidence interval:
 0.3765972 0.6529759 
sample estimates:
      cor 
0.5286566 

> 
> #Note: the /var/fisher/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab
> load(file="/var/fisher/rcomp/createtable")
> 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,paste('Shapiro Test (', xlab,')',sep=''),3,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Statistic W',header=TRUE)
> a<-table.element(a,'Probability',header=TRUE)
> a<-table.element(a,'Link',header=TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,round(sw1$statistic, digits=4))
> a<-table.element(a,round(sw1$p.value, digits=4))
> a<-table.element(a,hyperlink('http://en.wikipedia.org/wiki/Shapiro%E2%80%93Wilk_test','Shapiro-Wilk Test','Shapiro-Wilk Test'))
> a<-table.row.end(a)
> a<-table.end(a)
> table.save(a,file="/var/fisher/rcomp/tmp/27bgx1369219651.tab") 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a, paste('Shapiro Test (', ylab,')',sep=''),3,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Statistic W',header=TRUE)
> a<-table.element(a,'probability',header=TRUE)
> a<-table.element(a,'Link',header=TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,round(sw2$statistic, digits=4))
> a<-table.element(a,round(sw2$p.value, digits=4))
> a<-table.element(a,hyperlink('http://en.wikipedia.org/wiki/Shapiro%E2%80%93Wilk_test','Shapiro-Wilk Test','Shapiro-Wilk Test'))
> a<-table.row.end(a)
> a<-table.end(a)
> table.save(a,file="/var/fisher/rcomp/tmp/3v42u1369219651.tab") 
> a<-table.start()
> a<-table.row.start(a)
> a<-table.element(a,'Correlation Test X-Y',5,TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,'Statistic',header=TRUE)
> a<-table.element(a,'Value',header=TRUE)
> a<-table.element(a,'probability',header=TRUE)
> a<-table.element(a,'Method',header=TRUE)
> a<-table.element(a,'alternative',header=TRUE)
> a<-table.row.end(a)
> a<-table.row.start(a)
> a<-table.element(a,names(cxy$estimate))
> a<-table.element(a,round(cxy$estimate, digits=4))
> a<-table.element(a,round(cxy$p.value, digits=4))
> a<-table.element(a,cxy$method)
> a<-table.element(a,cxy$alternative)
> a<-table.row.end(a)
> a<-table.end(a)
> table.save(a,file="/var/fisher/rcomp/tmp/472vx1369219651.tab") 
> 
> try(system("convert tmp/1ca8d1369219651.ps tmp/1ca8d1369219651.png",intern=TRUE))
character(0)
> 
> 
> proc.time()
   user  system elapsed 
  0.910   0.184   1.068